FC921764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921764 vs. ExPASy Swiss-Prot
Match: RS5A_DROME (40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.530e-22 Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 1 Query: 7 RRQAVHVSPLRRVP*NLSLLTIGAREASFRNIKSIAECPAEELINAAKSSSHSYAIKKKDELERVAQSNR 216 RRQAV VSPLRRV + LL GAREA+FRNIK+IAEC A+ELINAAK SS+SYAIKKKDELERVA+SNR Sbjct: 159 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228
BLAST of FC921764 vs. ExPASy Swiss-Prot
Match: RS5_NICPL (40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia GN=RPS5 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.245e-21 Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 1 Query: 7 RRQAVHVSPLRRVP*NLSLLTIGAREASFRNIKSIAECPAEELINAAKSSSHSYAIKKKDELERVAQSNR 216 RRQAV +SPLRRV + LLT GARE++FRNIK+IAEC A+ELINAAK SS+SYAIKKKDE+ERVA++NR Sbjct: 85 RRQAVDISPLRRVSQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 154
BLAST of FC921764 vs. ExPASy Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.245e-21 Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 1 Query: 7 RRQAVHVSPLRRVP*NLSLLTIGAREASFRNIKSIAECPAEELINAAKSSSHSYAIKKKDELERVAQSNR 216 RRQAV +SPLRRV + L+T GAREA+FRNIK+IAEC A+ELINAAK SS+SYAIKKKDE+ERVA++NR Sbjct: 138 RRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 207
BLAST of FC921764 vs. ExPASy Swiss-Prot
Match: RS5B_DROME (40S ribosomal protein S5b OS=Drosophila melanogaster GN=RpS5b PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.123e-21 Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 1 Query: 7 RRQAVHVSPLRRVP*NLSLLTIGAREASFRNIKSIAECPAEELINAAKSSSHSYAIKKKDELERVAQSNR 216 RRQAV VSPLRRV + L+ GAREA+FRNIK++AEC A+ELINAAK SS+SYAIKKKDELERVA+SNR Sbjct: 161 RRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 230
BLAST of FC921764 vs. ExPASy Swiss-Prot
Match: RS5_CAEEL (40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.773e-21 Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 1 Query: 7 RRQAVHVSPLRRVP*NLSLLTIGAREASFRNIKSIAECPAEELINAAKSSSHSYAIKKKDELERVAQSNR 216 RRQAV V+PLRRV + LL GAREA+FRN+K+IAEC A+ELINAAK SS+SYAIKKKDELERVA+SNR Sbjct: 141 RRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 210
BLAST of FC921764 vs. ExPASy Swiss-Prot
Match: RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=2 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 3.621e-21 Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 1 Query: 7 RRQAVHVSPLRRVP*NLSLLTIGAREASFRNIKSIAECPAEELINAAKSSSHSYAIKKKDELERVAQSNR 216 RRQAV VSPLRRV + LL GAREA+FRNIK+IAEC A+ELINA K SS+SYAIKKKDELERVA+SNR Sbjct: 135 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINARKGSSNSYAIKKKDELERVAKSNR 204
BLAST of FC921764 vs. ExPASy Swiss-Prot
Match: RS5_DICDI (40S ribosomal protein S5 OS=Dictyostelium discoideum GN=rps5 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.067e-17 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 1 Query: 7 RRQAVHVSPLRRVP*NLSLLTIGAREASFRNIKSIAECPAEELINAAKSSSHSYAIKKKDELERVAQSNR 216 RRQAV VSP+RRV + LLT G R A+FRNI+++AEC A+ELINA+K S +SY+IK+KD LER A+S+R Sbjct: 121 RRQAVDVSPMRRVNHAVYLLTQGTRAAAFRNIRTVAECLADELINASKGSPNSYSIKQKDALERTAKSHR 190
BLAST of FC921764 vs. ExPASy Swiss-Prot
Match: RS5_ENTHI (40S ribosomal protein S5 (Fragment) OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.878e-15 Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 7 RRQAVHVSPLRRVP*NLSLLTIGAREASFRNIKSIAECPAEELINAAKSSSHSYAIKKKDELERVAQSNR 216 R QAV VSPLRR+ L LL +G R +FRN KS+AEC A+E++NA+KS + S+AI KK++LERVA SNR Sbjct: 79 RGQAVDVSPLRRINHALYLLIMGCRCGAFRNSKSLAECLADEIVNASKSYTGSFAIMKKEDLERVANSNR 148
BLAST of FC921764 vs. ExPASy Swiss-Prot
Match: RS5_ENCCU (40S ribosomal protein S5 OS=Encephalitozoon cuniculi GN=RPS5 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.086e-13 Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 1 Query: 7 RRQAVHVSPLRRVP*NLSLLTIGAREASFRNIKSIAECPAEELINAAKSSSHSYAIKKKDELERVAQSNR 216 RR +V VSPL+R+ +S L+ G R ASFRN ++AE A ELI A+ +S +SYA+ KK E+ER+AQSNR Sbjct: 139 RRTSVDVSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNKKKEIERIAQSNR 208
BLAST of FC921764 vs. ExPASy Swiss-Prot
Match: RS7_AERPE (30S ribosomal protein S7P OS=Aeropyrum pernix GN=rps7p PE=3 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 4.437e-11 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 10 RQAVHVSPLRRVP*NLSLLTIGAREASFRNIKSIAECPAEELINAAKSSSHSYAIKKKDELERVAQSNR 216 R +V V+P RRV L + GAR+ +F N K I EC AEELI AA+ SYAI++K+E+ER+A S+R Sbjct: 137 RVSVDVAPQRRVDQALKFIADGARQCAFNNPKPIEECLAEELILAARGDPRSYAIRQKEEIERIALSSR 205 The following BLAST results are available for this feature:
BLAST of FC921764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921764 ID=FC921764; Name=FC921764; organism=Citrus sinensis; type=EST; length=324bpback to top |