FC921764

Overview
NameFC921764
Unique NameFC921764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC921764 vs. ExPASy Swiss-Prot
Match: RS7_SULTO (30S ribosomal protein S7P OS=Sulfolobus tokodaii GN=rps7p PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.884e-11
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 1 
Query:   16 AVHVSPLRRVP*NLSLLTIGAREASFRNIKSIAECPAEELINAAKSSSHSYAIKKKDELERVAQSNR 216
            AV V+P RRV   L  L +GA+EASF N K I E  AEE+I AA +   S+AI+KK+E+ER+A S+R
Sbjct:  128 AVDVAPQRRVDLALRHLVMGAKEASFNNPKPIEEALAEEIIAAASNDPKSFAIRKKEEIERIALSSR 194
The following BLAST results are available for this feature:
BLAST of FC921764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
RS7_SULTO9.884e-1153.7330S ribosomal protein S7P OS=Sulfolobus tokodaii G... [more]

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Properties
Property NameValue
Genbank descriptionC06052A12T7 RindPdigS Citrus sinensis cDNA clone C06052A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921764 ID=FC921764; Name=FC921764; organism=Citrus sinensis; type=EST; length=324bp
CCGCCCCGTCGTCAAGCCGTCCATGTGTCTCCCCTCCGTCGCGTGCCCTA
GAACCTCTCTCTGCTCACCATCGGTGCCCGCGAGGCTTCTTTCCGCAACA
TCAAGAGCATTGCTGAGTGCCCTGCTGAGGAGCTGATCAACGCCGCCAAG
AGTTCCTCCCACTCCTACGCTATCAAGAAGAAGGATGAGCTCGAGCGTGT
TGCCCAGAGCAACCGGTAAAGGGGTTGTGTTGGATTTGTTCTCCCTATGG
TCCTCTGTTTGCGTATACTGGAGTGGACGGGGGTTTAACCCGGATTCAGT
GGATTCGCATGCATCTGCCAGGCT
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