FC921759

Overview
NameFC921759
Unique NameFC921759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10524 contig Csv1_Contig10524:565..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_CYAP7 (Ferrochelatase OS=Cyanothece sp. (strain PCC 7424) GN=hemH PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.577e-27
Identity = 56/87 (64.37%), Postives = 73/87 (83.91%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYV++AGDPY+ ++EEC  LIM+ L      ND+TLAYQSRVGPV+WLKPYT++ L ELG++G+K +L IP+SFVSEHIETL+EID+
Sbjct:  201 SYVDEAGDPYQKEIEECTRLIMKTLNRP---NDYTLAYQSRVGPVEWLKPYTEDALKELGEQGIKEILVIPISFVSEHIETLQEIDI 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_ANAVT (Ferrochelatase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=hemH PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.366e-27
Identity = 57/87 (65.52%), Postives = 71/87 (81.61%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ ++EEC  LIMQ L      N HTLAYQSRVGPV+WL+PYT++ L ELG +GVK L+ +P+SFVSEHIETL+EID+
Sbjct:  201 SYVEEAGDPYQQEIEECTALIMQTLNRP---NPHTLAYQSRVGPVEWLQPYTEDALKELGAQGVKDLVVVPISFVSEHIETLQEIDI 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_ANASP (Ferrochelatase OS=Anabaena sp. (strain PCC 7120) GN=hemH PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.366e-27
Identity = 57/87 (65.52%), Postives = 71/87 (81.61%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ ++EEC  LIMQ L      N HTLAYQSRVGPV+WL+PYT++ L ELG +GVK L+ +P+SFVSEHIETL+EID+
Sbjct:  201 SYVEEAGDPYQQEIEECTALIMQTLNRP---NPHTLAYQSRVGPVEWLQPYTEDALKELGAQGVKDLVVVPISFVSEHIETLQEIDI 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_NOSP7 (Ferrochelatase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemH PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.395e-27
Identity = 57/87 (65.52%), Postives = 71/87 (81.61%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ ++EEC  LIMQ L      N HTLAYQSRVGPV+WL+PYT++ L ELG +GVK L+ +P+SFVSEHIETL+EID+
Sbjct:  201 SYVEEAGDPYQQEIEECTALIMQTLNRP---NAHTLAYQSRVGPVEWLQPYTEDALKELGAQGVKDLVVVPISFVSEHIETLQEIDI 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PROM9 (Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9312) GN=hemH PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.741e-27
Identity = 55/88 (62.50%), Postives = 72/88 (81.82%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRL-KDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ Q+E+C  LI+  L K  G +N HTL+YQSRVGPV+WLKPYT+EVL +LG+  V+ L+ +P+SFV EHIETL+EID+
Sbjct:  201 SYVEEAGDPYKQQIEDCSLLIINELEKYLGHSNPHTLSYQSRVGPVEWLKPYTEEVLADLGKSNVEDLIVVPISFVGEHIETLQEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PROM0 (Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemH PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.741e-27
Identity = 55/88 (62.50%), Postives = 71/88 (80.68%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRL-KDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ Q+E+C  LI+  L K  G +N HTL+YQSRVGPV+WLKPYT+EVL +LG+  V  L+ +P+SFV EHIETL+EID+
Sbjct:  201 SYVEEAGDPYKQQIEDCSLLIINELEKCLGYSNPHTLSYQSRVGPVEWLKPYTEEVLADLGRSNVNDLVVVPISFVGEHIETLQEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PROMT (Ferrochelatase OS=Prochlorococcus marinus (strain NATL2A) GN=hemH PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.498e-27
Identity = 55/88 (62.50%), Postives = 73/88 (82.95%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDR-GINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+DQ++ C  LI+ +L++  G  N  +LAYQSRVGP +WLKPYT+EVL +LG+ GVK L+ +P+SFVSEHIETL+EID+
Sbjct:  201 SYVEEAGDPYQDQIQNCSLLIIDQLENSLGFTNSFSLAYQSRVGPEEWLKPYTEEVLEKLGKSGVKELVVVPISFVSEHIETLQEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PROM2 (Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9215) GN=hemH PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.498e-27
Identity = 55/88 (62.50%), Postives = 71/88 (80.68%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRL-KDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ Q+E+C  LI+  L K  G +N HTL+YQSRVGPV+WLKPYT+EVL +LG+  V  L+ +P+SFV EHIETL+EID+
Sbjct:  201 SYVEEAGDPYKQQIEDCSLLIINELEKCLGHSNPHTLSYQSRVGPVEWLKPYTEEVLADLGRSNVNDLIVVPISFVGEHIETLQEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PROM1 (Ferrochelatase OS=Prochlorococcus marinus (strain NATL1A) GN=hemH PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.498e-27
Identity = 55/88 (62.50%), Postives = 73/88 (82.95%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDR-GINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+DQ++ C  LI+ +L++  G  N  +LAYQSRVGP +WLKPYT+EVL +LG+ GVK L+ +P+SFVSEHIETL+EID+
Sbjct:  201 SYVEEAGDPYQDQIQNCSLLIIDQLENSLGFTNSFSLAYQSRVGPEEWLKPYTEEVLEKLGKSGVKELVVVPISFVSEHIETLQEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PROMS (Ferrochelatase OS=Prochlorococcus marinus (strain AS9601) GN=hemH PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.792e-27
Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRL-KDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ Q+E+C  LI+  L K  G  N HTL+YQSRVGPV+WLKPYT+EVL +LG+  V  L+ +P+SFV EHIETL+EID+
Sbjct:  201 SYVEEAGDPYKQQIEDCSLLIINELEKCLGHTNPHTLSYQSRVGPVEWLKPYTEEVLADLGRSNVNDLIVVPISFVGEHIETLQEIDI 288          
The following BLAST results are available for this feature:
BLAST of FC921759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
HEMH_CYAP72.577e-2764.37Ferrochelatase OS=Cyanothece sp. (strain PCC 7424)... [more]
HEMH_ANAVT3.366e-2765.52Ferrochelatase OS=Anabaena variabilis (strain ATCC... [more]
HEMH_ANASP3.366e-2765.52Ferrochelatase OS=Anabaena sp. (strain PCC 7120) G... [more]
HEMH_NOSP74.395e-2765.52Ferrochelatase OS=Nostoc punctiforme (strain ATCC ... [more]
HEMH_PROM95.741e-2762.50Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]
HEMH_PROM05.741e-2762.50Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]
HEMH_PROMT7.498e-2762.50Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]
HEMH_PROM27.498e-2762.50Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]
HEMH_PROM17.498e-2762.50Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]
HEMH_PROMS9.792e-2762.50Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06052A06T7 RindPdigS Citrus sinensis cDNA clone C06052A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921759 ID=FC921759; Name=FC921759; organism=Citrus sinensis; type=EST; length=269bp
CTTGTCAGTTATGTTGAGAAAGCTGGTGATCCATACAGAGATCAGATGGA
GGAGTGTATCTACCTAATCATGCAGAGGTTGAAAGATAGAGGAATCAACA
ATGATCATACTTTGGCATACCAGAGTCGAGTTGGGCCTGTACAATGGCTG
AAGCCTTACACTGATGAAGTTCTTGTGGAGCTTGGCCAGAAAGGTGTCAA
GAGTCTTCTAGCCATTCCAGTCAGTTTTGTGAGCGAGCACATTGAAACTC
TTGAAGAGATTGACATGGA
back to top