FC921759

Overview
NameFC921759
Unique NameFC921759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10524 contig Csv1_Contig10524:565..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_CYAP8 (Ferrochelatase OS=Cyanothece sp. (strain PCC 8801) GN=hemH PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.792e-27
Identity = 56/87 (64.37%), Postives = 72/87 (82.76%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYV++AGDPY+ ++E C  LIMQ L      ND+TLAYQSRVGPV+WLKPYT++ L ELG++GV+ LL +P+SFVSEHIETL+EID+
Sbjct:  201 SYVDEAGDPYQAEIEACTRLIMQTLNRP---NDYTLAYQSRVGPVEWLKPYTEDALKELGEQGVQDLLVVPISFVSEHIETLQEIDI 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_TRIEI (Ferrochelatase OS=Trichodesmium erythraeum (strain IMS101) GN=hemH PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.279e-26
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1
Query:    4 VSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            VSYVE+AGDPY+ ++EEC+  IM+ L     +N HTLAYQSRVGPV+WLKPYT++ + EL   GVK LL +P+SFVSEHIETL+EID+
Sbjct:  200 VSYVEEAGDPYQAEIEECVDKIMKTLN---CSNPHTLAYQSRVGPVEWLKPYTEDAIEELAAGGVKDLLVVPISFVSEHIETLQEIDI 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PROM4 (Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9211) GN=hemH PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.279e-26
Identity = 54/88 (61.36%), Postives = 73/88 (82.95%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRL-KDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+D++E+C  LI+ +L K  G  N +TL+YQSRVGP +WL+PYT++VL ELG+ G K L+ +P+SFVSEHIETL+EID+
Sbjct:  201 SYVEEAGDPYKDEIEDCSILIIDQLEKALGYINPYTLSYQSRVGPEEWLQPYTEDVLAELGESGTKELVVVPISFVSEHIETLQEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_MICAN (Ferrochelatase OS=Microcystis aeruginosa (strain NIES-843) GN=hemH PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.279e-26
Identity = 56/87 (64.37%), Postives = 71/87 (81.61%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ Q+EEC   IM+ L      N +TLAYQSRVGPV+WLKPYT++ L ELG++G+K LL +P+SFVSEHIETL+EID+
Sbjct:  201 SYVEEAGDPYQRQIEECTRAIMRTLNRP---NQYTLAYQSRVGPVEWLKPYTEDALKELGEQGIKHLLVVPISFVSEHIETLQEIDI 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_SYNPX (Ferrochelatase OS=Synechococcus sp. (strain WH8102) GN=hemH PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.670e-26
Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDR-GINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ Q+E C  LIM+ L +  G +N HTLAYQSRVGPV+WLKPYT+E L +LG+     L+ +P+SFVSEHIETLEEID+
Sbjct:  201 SYVEEAGDPYQQQIEACTDLIMKSLAEHMGHSNPHTLAYQSRVGPVEWLKPYTEEALEQLGEAKTNDLVVVPISFVSEHIETLEEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_SYNJB (Ferrochelatase OS=Synechococcus sp. GN=hemH PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.721e-26
Identity = 54/87 (62.07%), Postives = 72/87 (82.76%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYV +AGDPY+ +ME C+ LI +++   G  NDHTL+YQSRVG V+WL+PYT+ V++ELG +GVK LL +P+SFVSEHIETL+EID+
Sbjct:  201 SYVTEAGDPYQREMEACVRLIWKQV---GRPNDHTLSYQSRVGSVRWLQPYTERVILELGSRGVKQLLVVPISFVSEHIETLQEIDI 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PROM5 (Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemH PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.721e-26
Identity = 54/88 (61.36%), Postives = 72/88 (81.82%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRL-KDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY++Q+E+C  LI+  L K  G +N +TL+YQSRVGPV+WLKPYT+EVL +LG+  V  L+ +P+SFV EHIETL+EID+
Sbjct:  201 SYVEEAGDPYKEQIEDCSLLIINELEKYLGHSNSYTLSYQSRVGPVEWLKPYTEEVLTDLGKAKVNDLIVVPISFVGEHIETLQEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_SYNS3 (Ferrochelatase OS=Synechococcus sp. (strain CC9311) GN=hemH PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.860e-26
Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDR-GINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ ++E C  LIM  L+   G +N HTLAYQSRVGPV+WLKPYT+E L ELG+   + L+ +P+SFVSEHIETLEEID+
Sbjct:  201 SYVEEAGDPYQQEIEACAALIMAELETIVGHSNPHTLAYQSRVGPVEWLKPYTEEALEELGRAKTQDLVVVPISFVSEHIETLEEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_SYNP6 (Ferrochelatase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemH PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.347e-26
Identity = 55/88 (62.50%), Postives = 72/88 (81.82%), Query Frame = 1
Query:    4 VSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            VSYVE+AGDPY+ ++E+C   IM+ L   G +N  TLAYQSRVGPV+WL+PYT++ L EL ++GVK L+ +P+SFVSEHIETLEEID+
Sbjct:  200 VSYVEEAGDPYQREIEDCTRKIMETL---GRSNPWTLAYQSRVGPVEWLQPYTEDALEELAERGVKDLVVVPISFVSEHIETLEEIDI 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_SYNE7 (Ferrochelatase OS=Synechococcus elongatus (strain PCC 7942) GN=hemH PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.347e-26
Identity = 55/88 (62.50%), Postives = 72/88 (81.82%), Query Frame = 1
Query:    4 VSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            VSYVE+AGDPY+ ++E+C   IM+ L   G +N  TLAYQSRVGPV+WL+PYT++ L EL ++GVK L+ +P+SFVSEHIETLEEID+
Sbjct:  200 VSYVEEAGDPYQREIEDCTRKIMETL---GRSNPWTLAYQSRVGPVEWLQPYTEDALEELAERGVKDLVVVPISFVSEHIETLEEIDI 284          
The following BLAST results are available for this feature:
BLAST of FC921759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
HEMH_CYAP89.792e-2764.37Ferrochelatase OS=Cyanothece sp. (strain PCC 8801)... [more]
HEMH_TRIEI1.279e-2663.64Ferrochelatase OS=Trichodesmium erythraeum (strain... [more]
HEMH_PROM41.279e-2661.36Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]
HEMH_MICAN1.279e-2664.37Ferrochelatase OS=Microcystis aeruginosa (strain N... [more]
HEMH_SYNPX1.670e-2663.64Ferrochelatase OS=Synechococcus sp. (strain WH8102... [more]
HEMH_SYNJB3.721e-2662.07Ferrochelatase OS=Synechococcus sp. GN=hemH PE=3 S... [more]
HEMH_PROM53.721e-2661.36Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]
HEMH_SYNS34.860e-2663.64Ferrochelatase OS=Synechococcus sp. (strain CC9311... [more]
HEMH_SYNP66.347e-2662.50Ferrochelatase OS=Synechococcus sp. (strain ATCC 2... [more]
HEMH_SYNE76.347e-2662.50Ferrochelatase OS=Synechococcus elongatus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC06052A06T7 RindPdigS Citrus sinensis cDNA clone C06052A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921759 ID=FC921759; Name=FC921759; organism=Citrus sinensis; type=EST; length=269bp
CTTGTCAGTTATGTTGAGAAAGCTGGTGATCCATACAGAGATCAGATGGA
GGAGTGTATCTACCTAATCATGCAGAGGTTGAAAGATAGAGGAATCAACA
ATGATCATACTTTGGCATACCAGAGTCGAGTTGGGCCTGTACAATGGCTG
AAGCCTTACACTGATGAAGTTCTTGTGGAGCTTGGCCAGAAAGGTGTCAA
GAGTCTTCTAGCCATTCCAGTCAGTTTTGTGAGCGAGCACATTGAAACTC
TTGAAGAGATTGACATGGA
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