FC921759

Overview
NameFC921759
Unique NameFC921759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10524 contig Csv1_Contig10524:565..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PROMP (Ferrochelatase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=hemH PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.347e-26
Identity = 54/88 (61.36%), Postives = 71/88 (80.68%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRL-KDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY++Q+E+C  LI+  L K  G  N +TL+YQSRVGPV+WLKPYT+EVL +LG+  V  L+ +P+SFV EHIETL+EID+
Sbjct:  201 SYVEEAGDPYKEQIEDCSLLIIDELEKYLGHTNPYTLSYQSRVGPVEWLKPYTEEVLTDLGKAKVNDLIVVPISFVGEHIETLQEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_GLOVI (Ferrochelatase OS=Gloeobacter violaceus GN=hemH PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.290e-26
Identity = 55/87 (63.22%), Postives = 72/87 (82.76%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            +YV++ GDPY+ Q EE + L+MQ L   G  N H+LAYQSRVGPV+WLKPYT++ + EL QKGV+SLLA+PVSF+SEHIETL+EI++
Sbjct:  201 TYVDQDGDPYQRQTEETVDLVMQSL---GRPNAHSLAYQSRVGPVEWLKPYTEDTINELAQKGVRSLLAVPVSFISEHIETLQEIEI 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_SYNSC (Ferrochelatase OS=Synechococcus sp. (strain CC9605) GN=hemH PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.847e-25
Identity = 56/88 (63.64%), Postives = 68/88 (77.27%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLK-DRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ ++E C  LIM+ L    G +N  TLAYQSRVGPV+WLKPYT+E L ELGQ     L+ +P+SFVSEHIETLEEID+
Sbjct:  201 SYVEEAGDPYQKEIETCTGLIMKELAVQMGHDNPFTLAYQSRVGPVEWLKPYTEEALEELGQAKTNDLVVVPISFVSEHIETLEEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_CYAP4 (Ferrochelatase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=hemH PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.150e-25
Identity = 54/88 (61.36%), Postives = 68/88 (77.27%), Query Frame = 1
Query:    4 VSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            +SYV +AGDPY+ ++E C  LIMQ L      N H LAYQSRVGPV+WLKPYT+EV+ EL  +GV  L+ +P+SF+SEHIETL+EIDM
Sbjct:  200 LSYVTEAGDPYQAEIEGCTALIMQALNRP---NPHVLAYQSRVGPVEWLKPYTEEVIPELASQGVNELVVVPISFISEHIETLQEIDM 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_THEEB (Ferrochelatase OS=Thermosynechococcus elongatus (strain BP-1) GN=hemH PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 4.114e-25
Identity = 52/87 (59.77%), Postives = 71/87 (81.61%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYV +AGDPY++++E C+ LIM  L      N H LAYQSRVGPV+WL+PYT++V++EL  +GVK+L+ +P+SFVSEHIETL+EID+
Sbjct:  202 SYVTEAGDPYQEEIEACVRLIMAALNRP---NAHVLAYQSRVGPVEWLQPYTEDVILELAAQGVKTLVVVPISFVSEHIETLQEIDI 285          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PROM3 (Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemH PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.114e-25
Identity = 51/88 (57.95%), Postives = 70/88 (79.55%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDR-GINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ ++E C  LIM  L++  G  N H+LAYQSRVGP +W++PYTDEV+ +LG+ G + L+ +P+SFVSEHIETL E+D+
Sbjct:  201 SYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQSRVGPEEWIQPYTDEVIEQLGEAGTRDLVVVPISFVSEHIETLAELDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_SYNY3 (Ferrochelatase OS=Synechocystis sp. (strain PCC 6803) GN=hemH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.373e-25
Identity = 55/87 (63.22%), Postives = 71/87 (81.61%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYV++AGDPY+ ++E C  LIM+ L DR   N +TLAYQSRVGPV+WLKPYT+E L +LG +G+  LL +P+SFVSEHIETL+EID+
Sbjct:  201 SYVDEAGDPYQAEIEACTRLIMRTL-DRP--NQYTLAYQSRVGPVEWLKPYTEEALQKLGAEGIDDLLVVPISFVSEHIETLQEIDI 284          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_SYNPW (Ferrochelatase OS=Synechococcus sp. (strain WH7803) GN=hemH PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.373e-25
Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKD-RGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ ++E C  LIM+ L    G +N  TLAYQSRVGPV+WLKPYT+E L ELG+     L+ +P+SFVSEHIETLEEID+
Sbjct:  201 SYVEEAGDPYQKEIESCTDLIMKELGQLMGHDNPFTLAYQSRVGPVEWLKPYTEEALEELGKAKTNDLVVVPISFVSEHIETLEEIDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PROMM (Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9313) GN=hemH PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.165e-25
Identity = 50/88 (56.82%), Postives = 70/88 (79.55%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDR-GINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYVE+AGDPY+ ++E C  LIM  L++  G  N H+LAYQSRVGP +W++PYTD+V+ +LG+ G + L+ +P+SFVSEHIETL E+D+
Sbjct:  201 SYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQSRVGPEEWIQPYTDQVIEQLGEAGTRDLVVVPISFVSEHIETLAELDI 288          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_SYNJA (Ferrochelatase OS=Synechococcus sp. (strain JA-3-3Ab) GN=hemH PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.941e-24
Identity = 52/87 (59.77%), Postives = 68/87 (78.16%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            SYV +AGDPY+ +ME C+ LI + +   G  N HTL+YQSRVG V+WL+PYT+ V+ ELG  GV+ LL +P+SFVSEHIETL+EID+
Sbjct:  201 SYVTQAGDPYQQEMEACVQLIWREV---GRPNRHTLSYQSRVGSVRWLQPYTETVIPELGACGVRQLLVVPISFVSEHIETLQEIDI 284          
The following BLAST results are available for this feature:
BLAST of FC921759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
HEMH_PROMP6.347e-2661.36Ferrochelatase OS=Prochlorococcus marinus subsp. p... [more]
HEMH_GLOVI8.290e-2663.22Ferrochelatase OS=Gloeobacter violaceus GN=hemH PE... [more]
HEMH_SYNSC1.847e-2563.64Ferrochelatase OS=Synechococcus sp. (strain CC9605... [more]
HEMH_CYAP43.150e-2561.36Ferrochelatase OS=Cyanothece sp. (strain PCC 7425 ... [more]
HEMH_THEEB4.114e-2559.77Ferrochelatase OS=Thermosynechococcus elongatus (s... [more]
HEMH_PROM34.114e-2557.95Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]
HEMH_SYNY35.373e-2563.22Ferrochelatase OS=Synechocystis sp. (strain PCC 68... [more]
HEMH_SYNPW5.373e-2562.50Ferrochelatase OS=Synechococcus sp. (strain WH7803... [more]
HEMH_PROMM9.165e-2556.82Ferrochelatase OS=Prochlorococcus marinus (strain ... [more]
HEMH_SYNJA5.941e-2459.77Ferrochelatase OS=Synechococcus sp. (strain JA-3-3... [more]

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Properties
Property NameValue
Genbank descriptionC06052A06T7 RindPdigS Citrus sinensis cDNA clone C06052A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921759 ID=FC921759; Name=FC921759; organism=Citrus sinensis; type=EST; length=269bp
CTTGTCAGTTATGTTGAGAAAGCTGGTGATCCATACAGAGATCAGATGGA
GGAGTGTATCTACCTAATCATGCAGAGGTTGAAAGATAGAGGAATCAACA
ATGATCATACTTTGGCATACCAGAGTCGAGTTGGGCCTGTACAATGGCTG
AAGCCTTACACTGATGAAGTTCTTGTGGAGCTTGGCCAGAAAGGTGTCAA
GAGTCTTCTAGCCATTCCAGTCAGTTTTGTGAGCGAGCACATTGAAACTC
TTGAAGAGATTGACATGGA
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