FC921759

Overview
NameFC921759
Unique NameFC921759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10524 contig Csv1_Contig10524:565..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_DROME (Ferrochelatase, mitochondrial OS=Drosophila melanogaster GN=Fech PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.573e-14
Identity = 33/81 (40.74%), Postives = 57/81 (70.37%), Query Frame = 1
Query:   25 GDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            GD Y  ++   ++++MQ L   G  N ++LA+QS+VGP+ WL P TD+ +    ++G+K+ + +P++FV+EHIETL E+D+
Sbjct:  233 GDAYPSEIGASVHMVMQEL---GQTNPYSLAWQSKVGPLPWLAPATDDAIKGYVKQGLKNFILVPIAFVNEHIETLHELDI 310          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_CHICK (Ferrochelatase, mitochondrial OS=Gallus gallus GN=FECH PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.573e-14
Identity = 35/85 (41.18%), Postives = 56/85 (65.88%), Query Frame = 1
Query:   13 VEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            V   GDPY  ++   +  +M++L     +N + L +QS+VGP+ WL P TDE +  L Q+G K++L +P++F S+HIETL E+D+
Sbjct:  248 VVNRGDPYPQEVGATVQRVMEKLNH---SNPYRLVWQSKVGPMPWLVPQTDETIKGLCQRGKKNMLLVPIAFTSDHIETLYELDI 329          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_WOLWR (Ferrochelatase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=hemH PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.279e-14
Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINN-DHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            K GDPY  Q+E  + LI+++L    INN D ++ YQS++GPV+WL+P T+  L+     GV  +L+ P+SFVSEH ETL E+D+
Sbjct:  201 KKGDPYASQVERSVELIVEKL---AINNLDWSICYQSKIGPVKWLEPSTESELLRAKADGVPVVLS-PISFVSEHSETLVELDI 280          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_WOLPM (Ferrochelatase OS=Wolbachia pipientis wMel GN=hemH PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.279e-14
Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINN-DHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            K GDPY  Q+E  + LI+++L    INN D ++ YQS++GPV+WL+P T+  L+     GV  +L+ P+SFVSEH ETL E+D+
Sbjct:  201 KKGDPYASQVERSVELIVEKL---AINNLDWSICYQSKIGPVKWLEPSTESELLRAKADGVPVVLS-PISFVSEHSETLVELDI 280          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_BOVIN (Ferrochelatase, mitochondrial OS=Bos taurus GN=FECH PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 7.279e-14
Identity = 35/85 (41.18%), Postives = 56/85 (65.88%), Query Frame = 1
Query:   13 VEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            V   GDPY  ++   +  +M +L   G +N + L +QS+VGP+ WL P TDE +  L ++G K++L +P++F S+HIETL E+D+
Sbjct:  262 VVNRGDPYPQEVGATVQRVMDKL---GYSNPYRLVWQSKVGPMPWLGPQTDEAIKGLCKRGRKNILLVPIAFTSDHIETLYELDI 343          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PELUB (Ferrochelatase OS=Pelagibacter ubique GN=hemH PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.242e-13
Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            K GDPY+ Q+E+ +  I++ L     N D  L+YQSRVGP++W+ P T++++VE   K  K ++ +P++FVSEH ETL E+D+
Sbjct:  199 KKGDPYQWQVEQSVKKIVENLNIE--NLDWILSYQSRVGPLKWIGPSTEDIIVE-NSKLAKHIVLVPIAFVSEHSETLVELDI 278          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PANTR (Ferrochelatase, mitochondrial OS=Pan troglodytes GN=FECH PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.622e-13
Identity = 35/85 (41.18%), Postives = 56/85 (65.88%), Query Frame = 1
Query:   13 VEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            V   GDPY  ++   +  +M+RL+     N + L +QS+VGP+ WL P TDE +  L ++G K++L +P++F S+HIETL E+D+
Sbjct:  269 VVNRGDPYPQEVSATVQKVMERLE---YCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDI 350          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_HUMAN (Ferrochelatase, mitochondrial OS=Homo sapiens GN=FECH PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.622e-13
Identity = 35/85 (41.18%), Postives = 56/85 (65.88%), Query Frame = 1
Query:   13 VEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            V   GDPY  ++   +  +M+RL+     N + L +QS+VGP+ WL P TDE +  L ++G K++L +P++F S+HIETL E+D+
Sbjct:  269 VVNRGDPYPQEVSATVQKVMERLE---YCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDI 350          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_LEPBL (Ferrochelatase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=hemH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.162e-13
Identity = 35/86 (40.70%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    4 VSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            +  +EK GD YR+++   +  + + L ++G       ++QSRVGP +W +P T  +L +LG+ GVK +   P+SFVS+H+ETLEEI
Sbjct:  214 IRLIEK-GDRYREEINSNVENLKRLLYEKGFRGKCHTSFQSRVGPSKWTEPNTITMLEQLGKNGVKRVAVYPISFVSDHLETLEEI 298          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_LEPBJ (Ferrochelatase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=hemH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.162e-13
Identity = 35/86 (40.70%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    4 VSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            +  +EK GD YR+++   +  + + L ++G       ++QSRVGP +W +P T  +L +LG+ GVK +   P+SFVS+H+ETLEEI
Sbjct:  214 IRLIEK-GDRYREEINSNVENLKRLLYEKGFQGKCHTSFQSRVGPSKWTEPNTITMLEQLGKNGVKRVAVYPISFVSDHLETLEEI 298          
The following BLAST results are available for this feature:
BLAST of FC921759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
HEMH_DROME5.573e-1440.74Ferrochelatase, mitochondrial OS=Drosophila melano... [more]
HEMH_CHICK5.573e-1441.18Ferrochelatase, mitochondrial OS=Gallus gallus GN=... [more]
HEMH_WOLWR7.279e-1447.62Ferrochelatase OS=Wolbachia sp. subsp. Drosophila ... [more]
HEMH_WOLPM7.279e-1447.62Ferrochelatase OS=Wolbachia pipientis wMel GN=hemH... [more]
HEMH_BOVIN7.279e-1441.18Ferrochelatase, mitochondrial OS=Bos taurus GN=FEC... [more]
HEMH_PELUB1.242e-1344.58Ferrochelatase OS=Pelagibacter ubique GN=hemH PE=3... [more]
HEMH_PANTR1.622e-1341.18Ferrochelatase, mitochondrial OS=Pan troglodytes G... [more]
HEMH_HUMAN1.622e-1341.18Ferrochelatase, mitochondrial OS=Homo sapiens GN=F... [more]
HEMH_LEPBL6.162e-1340.70Ferrochelatase OS=Leptospira borgpetersenii serova... [more]
HEMH_LEPBJ6.162e-1340.70Ferrochelatase OS=Leptospira borgpetersenii serova... [more]

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Properties
Property NameValue
Genbank descriptionC06052A06T7 RindPdigS Citrus sinensis cDNA clone C06052A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921759 ID=FC921759; Name=FC921759; organism=Citrus sinensis; type=EST; length=269bp
CTTGTCAGTTATGTTGAGAAAGCTGGTGATCCATACAGAGATCAGATGGA
GGAGTGTATCTACCTAATCATGCAGAGGTTGAAAGATAGAGGAATCAACA
ATGATCATACTTTGGCATACCAGAGTCGAGTTGGGCCTGTACAATGGCTG
AAGCCTTACACTGATGAAGTTCTTGTGGAGCTTGGCCAGAAAGGTGTCAA
GAGTCTTCTAGCCATTCCAGTCAGTTTTGTGAGCGAGCACATTGAAACTC
TTGAAGAGATTGACATGGA
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