FC921759

Overview
NameFC921759
Unique NameFC921759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10524 contig Csv1_Contig10524:565..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_BRUSU (Ferrochelatase OS=Brucella suis GN=hemH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.162e-13
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            SY +K GDPYR Q  E   L+ +RL   G+  D   A +QSR GP +WL+PYTDE + EL + GVKS+  +   FV++ +ET++EI
Sbjct:  227 SYSDK-GDPYRQQCLETTRLLRERL---GLGEDEMRATFQSRFGPEEWLQPYTDETVKELAKNGVKSVAVLNPGFVADCLETVDEI 308          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_BRUSI (Ferrochelatase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=hemH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.162e-13
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            SY +K GDPYR Q  E   L+ +RL   G+  D   A +QSR GP +WL+PYTDE + EL + GVKS+  +   FV++ +ET++EI
Sbjct:  227 SYSDK-GDPYRQQCLETTRLLRERL---GLGEDEMRATFQSRFGPEEWLQPYTDETVKELAKNGVKSVAVLNPGFVADCLETVDEI 308          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_BRUO2 (Ferrochelatase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=hemH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.162e-13
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            SY +K GDPYR Q  E   L+ +RL   G+  D   A +QSR GP +WL+PYTDE + EL + GVKS+  +   FV++ +ET++EI
Sbjct:  227 SYSDK-GDPYRQQCLETTRLLRERL---GLGEDEMRATFQSRFGPEEWLQPYTDETVKELAKNGVKSVAVLNPGFVADCLETVDEI 308          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_BRUME (Ferrochelatase OS=Brucella melitensis GN=hemH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.162e-13
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            SY +K GDPYR Q  E   L+ +RL   G+  D   A +QSR GP +WL+PYTDE + EL + GVKS+  +   FV++ +ET++EI
Sbjct:  227 SYSDK-GDPYRQQCLETTRLLRERL---GLGEDEMRATFQSRFGPEEWLQPYTDETVKELAKNGVKSVAVLNPGFVADCLETVDEI 308          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_BRUMB (Ferrochelatase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=hemH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.162e-13
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            SY +K GDPYR Q  E   L+ +RL   G+  D   A +QSR GP +WL+PYTDE + EL + GVKS+  +   FV++ +ET++EI
Sbjct:  227 SYSDK-GDPYRQQCLETTRLLRERL---GLGEDEMRATFQSRFGPEEWLQPYTDETVKELAKNGVKSVAVLNPGFVADCLETVDEI 308          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_BRUC2 (Ferrochelatase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=hemH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.162e-13
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            SY +K GDPYR Q  E   L+ +RL   G+  D   A +QSR GP +WL+PYTDE + EL + GVKS+  +   FV++ +ET++EI
Sbjct:  227 SYSDK-GDPYRQQCLETTRLLRERL---GLGEDEMRATFQSRFGPEEWLQPYTDETVKELAKNGVKSVAVLNPGFVADCLETVDEI 308          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_DICDI (Ferrochelatase, mitochondrial OS=Dictyostelium discoideum GN=hemH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.051e-12
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 1
Query:    4 VSYVEKAGDPYRDQMEECIYLIMQRL----KDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            +S VEK GDPY  ++ E +  +M  L    ++ G   ++ LA+QS+VGP+ WL P T  V+ +L +KG ++ + IP++F S+HIETL EID+
Sbjct:  259 MSTVEK-GDPYPQEVAETVCRVMDGLGIRDEETGKPLEYILAWQSKVGPLPWLSPKTSFVIEQLAKKG-RNAIVIPIAFTSDHIETLSEIDI 348          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_SCHPO (Ferrochelatase, mitochondrial OS=Schizosaccharomyces pombe GN=SPCC320.09 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.793e-12
Identity = 32/80 (40.00%), Postives = 54/80 (67.50%), Query Frame = 1
Query:   25 GDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEID 264
            GDPY  ++      +M+RL  +   N    A+QS+VGP+ W+ P TD V+ +LG +G K+++ +P++F S+HIETL+E++
Sbjct:  238 GDPYVYEIAATSQAVMKRLNYK---NKFVNAWQSKVGPLPWMSPATDFVIEQLGNRGQKNMILVPIAFTSDHIETLKELE 314          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_BRUAB (Ferrochelatase OS=Brucella abortus GN=hemH PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.058e-12
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            SY +K GDPYR Q  E   L+ +RL   G+  D   A +QSR GP +WL+PYTDE + EL + GVK +  +   FV++ +ET++EI
Sbjct:  227 SYSDK-GDPYRQQCLETTRLLRERL---GLGEDEMRATFQSRFGPEEWLQPYTDETVKELAKNGVKLVAVLNPGFVADCLETVDEI 308          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_BRUA2 (Ferrochelatase OS=Brucella abortus (strain 2308) GN=hemH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.058e-12
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            SY +K GDPYR Q  E   L+ +RL   G+  D   A +QSR GP +WL+PYTDE + EL + GVK +  +   FV++ +ET++EI
Sbjct:  227 SYSDK-GDPYRQQCLETTRLLRERL---GLGEDEMRATFQSRFGPEEWLQPYTDETVKELAKNGVKLVAVLNPGFVADCLETVDEI 308          
The following BLAST results are available for this feature:
BLAST of FC921759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
HEMH_BRUSU6.162e-1346.51Ferrochelatase OS=Brucella suis GN=hemH PE=3 SV=1[more]
HEMH_BRUSI6.162e-1346.51Ferrochelatase OS=Brucella suis (strain ATCC 23445... [more]
HEMH_BRUO26.162e-1346.51Ferrochelatase OS=Brucella ovis (strain ATCC 25840... [more]
HEMH_BRUME6.162e-1346.51Ferrochelatase OS=Brucella melitensis GN=hemH PE=3... [more]
HEMH_BRUMB6.162e-1346.51Ferrochelatase OS=Brucella melitensis biotype 2 (s... [more]
HEMH_BRUC26.162e-1346.51Ferrochelatase OS=Brucella canis (strain ATCC 2336... [more]
HEMH_DICDI1.051e-1242.39Ferrochelatase, mitochondrial OS=Dictyostelium dis... [more]
HEMH_SCHPO1.793e-1240.00Ferrochelatase, mitochondrial OS=Schizosaccharomyc... [more]
HEMH_BRUAB3.058e-1245.35Ferrochelatase OS=Brucella abortus GN=hemH PE=3 SV... [more]
HEMH_BRUA23.058e-1245.35Ferrochelatase OS=Brucella abortus (strain 2308) G... [more]

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Properties
Property NameValue
Genbank descriptionC06052A06T7 RindPdigS Citrus sinensis cDNA clone C06052A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921759 ID=FC921759; Name=FC921759; organism=Citrus sinensis; type=EST; length=269bp
CTTGTCAGTTATGTTGAGAAAGCTGGTGATCCATACAGAGATCAGATGGA
GGAGTGTATCTACCTAATCATGCAGAGGTTGAAAGATAGAGGAATCAACA
ATGATCATACTTTGGCATACCAGAGTCGAGTTGGGCCTGTACAATGGCTG
AAGCCTTACACTGATGAAGTTCTTGTGGAGCTTGGCCAGAAAGGTGTCAA
GAGTCTTCTAGCCATTCCAGTCAGTTTTGTGAGCGAGCACATTGAAACTC
TTGAAGAGATTGACATGGA
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