CN186426

Overview
NameCN186426
Unique NameCN186426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9782 contig Csv1_Contig9782:85..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_CHLP8 (Putative pterin-4-alpha-carbinolamine dehydratase OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_1693 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14
Identity = 42/112 (37.50%), Postives = 61/112 (54.46%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M  L  K CVPC+  +  PMA +  +  +  +  W++V+++G  KL R    K F   L+    V  +AE+EGHHP L L  W  V +   THA+GG+  ND I+A K  +L
Sbjct:    1 MTQLEKKHCVPCEGTEA-PMAPEELQRQLSHIPDWNVVDDSGTPKLVRVFTFKDFNDALDFTVRVGQLAESEGHHPAL-LTEWGKVTVSWWTHAIGGIHLNDVIMATKTEKL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_HALHL (Putative pterin-4-alpha-carbinolamine dehydratase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=Hhal_1266 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.478e-14
Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = -2
Query:  165 LTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 491
            LT K CVPC    + PM    A+ ++ +V  W L  +     + R  K ++F   L     V +VAEAE HHPD+ L+G+   ++ I TH + GL ENDFILAAK++ L
Sbjct:    3 LTDKTCVPCQG-GVAPMDRQQAEQMLVQVPEWSL--DTDARMIYRRFKFRNFIDALSFVNRVTEVAEAEDHHPDI-LLGYGYAEVRIQTHKIEGLHENDFILAAKVDAL 107          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_RICFE (Putative pterin-4-alpha-carbinolamine dehydratase OS=Rickettsia felis GN=RF_0997 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.519e-14
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = -2
Query:  162 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRLD 500
            M  L+ KKC+PC+   + P+ +     L+ ++     VNE G   L +  K  +F K +E    + ++AE E HHPDL  + W    +EI TH + GLTE+DFILAAKI  ++
Sbjct:    1 MTVLSEKKCIPCEG-GIPPLEKKEIDKLLVQLQSKWQVNELG--HLYKKYKFPNFVKAMEFANKITEIAEQEAHHPDL-TISWGACSVEIWTHKIDGLTESDFILAAKIESIN 109          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_NITEU (Putative pterin-4-alpha-carbinolamine dehydratase OS=Nitrosomonas europaea GN=NE0077 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.209e-14
Identity = 41/111 (36.94%), Postives = 70/111 (63.06%), Query Frame = -2
Query:  165 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKVV-GWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 494
            DLT +KC PC+   + P+  + A+ L+ ++  GW L +     K++R+   K++ + +     +A V+  E HHPD+ +VG++  ++E  THA+GGL+ENDFI AAK++ L
Sbjct:    6 DLTDRKCKPCEG-GVPPLEMEEAEKLLKQLEQGWQLADN----KISRTFSFKNYYQTMAFVNAIAWVSHREDHHPDM-MVGYDWCRVEYMTHAIGGLSENDFICAAKVDML 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_RICCK (Putative pterin-4-alpha-carbinolamine dehydratase OS=Rickettsia canadensis (strain McKiel) GN=A1E_01360 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = -2
Query:  174 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKI 500
            M  L+ KKC+PC+   + P+ +     L+ ++     VNE G   L +  K  +F K L+    +A +AE E HHP+L+ + W    +EI TH + GLTENDFILAAKI
Sbjct:    1 MTVLSEKKCIPCEG-GVPPLEKKEIDKLLAELQNEWQVNELG--HLYKKYKFPNFVKALDFANKIAAIAEQEVHHPNLN-ISWGVCNVEIWTHKINGLTENDFILAAKI 105          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_IDILO (Putative pterin-4-alpha-carbinolamine dehydratase OS=Idiomarina loihiensis GN=IL0724 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = -2
Query:  177 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAK 500
            M +L   +C  C   D   ++++  K LM ++  W  V  + ++ L R  K K+F + L     V D+AE E HHP+L +  W  V +   THA+ GL +NDFI+AAK
Sbjct:    1 MSNLENARCEACHA-DAPQVSDEELKELMREIPDWTPVTNDNVMMLQREFKFKNFKQALAFTNRVGDLAEEEKHHPEL-VTEWGKVTVTWWTHAINGLHKNDFIMAAK 106          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_SACD2 (Putative pterin-4-alpha-carbinolamine dehydratase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=Sde_0891 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.673e-13
Identity = 39/112 (34.82%), Postives = 66/112 (58.93%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M DL  + C  C   D   +  D A+ ++ ++  W +  + G+ +L R+ K K+F + L     VA++AE EGHHP L ++ W +V++   TH + GL +NDF++AAK ++L
Sbjct:    1 MTDLYQQTCEVCRA-DAPRVPVDEAEVMLEEIPLWRIQQQEGVKQLARNFKFKNFIEALAFTNTVANLAEEEGHHPKL-VLEWGSVEVVWWTHKIKGLHKNDFVMAAKTDKL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_RICBR (Putative pterin-4-alpha-carbinolamine dehydratase OS=Rickettsia bellii (strain RML369-C) GN=RBE_1407 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.673e-13
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = -2
Query:  165 LTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 491
            L+ KKC+PC+   + P+ +     L+ ++    +VNE+G   L +  K   F + +E    +A +AE E HHPDL  + W    +EI TH + GLTE+DFILAAKI+ L
Sbjct:    7 LSDKKCIPCEG-GVPPLEKKEIDKLLSELQNEWIVNESG--HLYKKYKFPDFMQPIEFANKIAALAEQEVHHPDL-TISWGACIVEIWTHKIDGLTESDFILAAKIDLL 111          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_RICB8 (Putative pterin-4-alpha-carbinolamine dehydratase OS=Rickettsia bellii (strain OSU 85-389) GN=A1I_07835 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.673e-13
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = -2
Query:  165 LTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 491
            L+ KKC+PC+   + P+ +     L+ ++    +VNE+G   L +  K   F + +E    +A +AE E HHPDL  + W    +EI TH + GLTE+DFILAAKI+ L
Sbjct:    7 LSDKKCIPCEG-GVPPLEKKEIDKLLSELQNEWIVNESG--HLYKKYKFPDFMQPIEFANKIAALAEQEVHHPDL-TISWGACIVEIWTHKIDGLTESDFILAAKIDLL 111          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_LEGPH (Putative pterin-4-alpha-carbinolamine dehydratase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=lpg1999 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.673e-13
Identity = 41/111 (36.94%), Postives = 66/111 (59.46%), Query Frame = -2
Query:  165 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKV-VGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 494
            DL++K C  C+      +  +  K+L+P++   W++  +N I+K  R+   K+F + +     +A +A  E HHPDL  VG+N  ++   THA+ GLT NDFI AAKI++L
Sbjct:    4 DLSSKHCESCEGIGAA-LNSEQIKNLLPQLNTKWEVTEDNRIIK--RAFSFKNFYETMAFVNAIAWIANIENHHPDLE-VGYNYCRVHFMTHALNGLTHNDFICAAKIDKL 110          
The following BLAST results are available for this feature:
BLAST of CN186426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
PHS_CHLP81.897e-1437.50Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_HALHL2.478e-1440.37Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_RICFE5.519e-1438.05Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_NITEU7.209e-1436.94Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_RICCK1.606e-1340.37Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_IDILO1.606e-1336.11Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_SACD24.673e-1334.82Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_RICBR4.673e-1339.45Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_RICB84.673e-1339.45Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_LEGPH4.673e-1336.94Putative pterin-4-alpha-carbinolamine dehydratase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002O01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002O01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186426 ID=CN186426; Name=CN186426; organism=Citrus sinensis; type=EST; length=762bp
ATTTTTATTCATAAAAGGAAGCCAAAGATACTTCTTCACCCCCTAGTTCT
TAATAGGGCATCAAAATTATGCTCGGGGTCTCCTTTAAAATGTTTTACAA
AGCCAGCACAAGTTTTGATAATCTCTCAAGCAGAAATCTTTCTCCTCAGT
AGGTGGTGAATATCAAGCCTATTGATCTTAGCAGCAAGTATGAAGTCATT
TTCAGTCAGTCCACCAACTGCATGCGTACATATCTCAATTTGTACATTGT
TCCATCCGACAAGATGAAGGTCTGGATGATGACCTTCTGCTTCAGCAACA
TCTGCTACAAGCTTAAATAACTCCAAACCTTTGGTGAAACTCTTCACTTT
CAAGGATCGGTTCAGCTTCAAGATACCATTTTCATTCACCAAATCCCACC
CTACTACCTTGGGCATTAAGTGCTTAGCACTATCTTCGGCCATGGGACGT
AAGTCCTTTGTGTCACATGGCACACACTTTTTAGTCGTCAAATCGTCCAT
TACGAGCAAACAGGCTTTCAAATACTGATCGTAGAGGTACCTGAGGCCTA
GTCTTGCTTAACATGCTAGAGGTTGTGACCAGAGACATAATGGAGGATGC
TGTTCCAAGTCTGTTAGATTCTAGCCATGGTGGGTCCTATGGAAAAACCG
AGGGAATGACACCCCTTGATCAACAAGTTCATTTTTTTGGTGCACTTGGA
TTTCCAGTTTACCCAGAAACAGAAGCCTGGAAAGAAAAGATCAGAAGACT
TCATCTATTGCT
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