CN186426

Overview
NameCN186426
Unique NameCN186426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9782 contig Csv1_Contig9782:85..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_LEGPC (Putative pterin-4-alpha-carbinolamine dehydratase OS=Legionella pneumophila (strain Corby) GN=LPC_1482 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.673e-13
Identity = 41/111 (36.94%), Postives = 66/111 (59.46%), Query Frame = -2
Query:  165 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKV-VGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 494
            DL++K C  C+      +  +  K+L+P++   W++  +N I+K  R+   K+F + +     +A +A  E HHPDL  VG+N  ++   THA+ GLT NDFI AAKI++L
Sbjct:    4 DLSSKHCESCEGIGAA-LNSEQIKNLLPQLNTKWEVTEDNRIIK--RAFSFKNFYETMAFVNAIAWIANIENHHPDLE-VGYNYCRVHFMTHALNGLTHNDFICAAKIDKL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_LEGPA (Putative pterin-4-alpha-carbinolamine dehydratase OS=Legionella pneumophila (strain Paris) GN=lpp1980 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.673e-13
Identity = 41/111 (36.94%), Postives = 66/111 (59.46%), Query Frame = -2
Query:  165 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKV-VGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 494
            DL++K C  C+      +  +  K+L+P++   W++  +N I+K  R+   K+F + +     +A +A  E HHPDL  VG+N  ++   THA+ GLT NDFI AAKI++L
Sbjct:    4 DLSSKHCESCEGIGAA-LNSEQIKNLLPQLNTKWEVTEDNRIIK--RAFSFKNFYETMAFVNAIAWIANIENHHPDLE-VGYNYCRVHFMTHALNGLTHNDFICAAKIDKL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_LEGPL (Putative pterin-4-alpha-carbinolamine dehydratase OS=Legionella pneumophila (strain Lens) GN=lpl1975 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.103e-13
Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = -2
Query:  165 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKV-VGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 494
            DL++K C  C+      +  +  K+L+P++   W++  +N I+K  R+   K+F + +     +A +A  E HHPDL  VG+N   +   THA+ GLT NDFI AAKI++L
Sbjct:    4 DLSSKHCESCEGIGAA-LNSEQIKNLLPQLNTKWEVTEDNRIIK--RAFSFKNFYETMAFVNAIAWIANIENHHPDLE-VGYNYCHVHFMTHALNGLTHNDFICAAKIDKL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_CHRSD (Putative pterin-4-alpha-carbinolamine dehydratase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=Csal_1321 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.103e-13
Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M +L+  KC  C   D   ++E     L   V  W +V  +GI++L R    ++F + L     V D+AEA+GHHP L +  W  V +   +H +GGL +NDFI+AA+ + +
Sbjct:    1 MSELSELKCEACSA-DAPTVSEAEMHSLGADVPEWRIVERDGIMQLEREFTFRNFAQALAFTNQVGDLAEAQGHHPAL-ITEWGKVTVTWWSHKIGGLHKNDFIMAARTDEV 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_NITOC (Putative pterin-4-alpha-carbinolamine dehydratase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=Noc_2226 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.970e-13
Identity = 39/115 (33.91%), Postives = 66/115 (57.39%), Query Frame = -2
Query:  156 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRLDIH 500
            M+DL+T +C  C  +  R ++ED  + L P+V  W+++ E+ + +L R  K  +F + L+       +AE  GHHP + L  +  V +   +H + GL +NDFI+AAK ++L  H
Sbjct:    1 MEDLSTMQCEACRPEAPR-VSEDEIRELHPQVPDWEIIEEDEVRRLQRVFKFGNFAEALDFTNKTGALAEEAGHHPAI-LTEYGQVTVTWWSHKIKGLHKNDFIMAAKTDQLLKH 113          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS1_GLOVI (Putative pterin-4-alpha-carbinolamine dehydratase 1 OS=Gloeobacter violaceus GN=gll0926 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.970e-13
Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = -2
Query:  165 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 494
            +LT ++C  C     R  A + A+ L P++  W +V   G  +L R  +++ F + +     V + AEAEGHHP L L  W +V++   THA+ GL  NDF++AAK + +
Sbjct:    2 NLTEQRCTACRPDAPRVGAAEIAE-LHPQIPAWRIVEIEGTPRLERQFRLRDFREAIAFTVRVGEEAEAEGHHPAL-LTEWGSVKVSWWTHAIAGLHRNDFVMAAKTDAI 109          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_SHEPA (Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=Spea_1449 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M +L   KC  C   D   + ++    L+ K+  W +    G+++L R  K K+F   +E    +AD+AEA+ HHP + L  W  V +   +H++ GL +NDFI+AAK + L
Sbjct:    1 MTELAQMKCEACQA-DAPKVTDEELAQLIAKIPDWGVEVRGGVMQLERVYKFKNFKLAMEFTNKLADLAEADFHHPGI-LTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDTL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_SHEHH (Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella halifaxensis (strain HAW-EB4) GN=Shal_1532 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M +L   KC  C   D   + +D    L+ K+  W +   +GI++L R  K K+F   +     +AD+AEA+ HHP + L  W  V +   +H++ GL +NDFI+AAK + L
Sbjct:    1 MTELAQMKCEACQA-DAPKVTDDELAQLIAKIPDWGVEVRDGIMQLERVYKFKNFKLAMAFTNKLADLAEADFHHPGI-LTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDTL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_SHEDO (Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=Sden_2594 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 39/112 (34.82%), Postives = 62/112 (55.36%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M+ LT+ KC  C   D   +++     L+  +  W +   +GI++L R  K K+F   +     +AD AE EGHHP + L  W  V +   +H++ GL +NDFI+AAK ++L
Sbjct:    1 MNALTSMKCEACQA-DAPKVSDQELAELIRLIPDWGVEVRDGIMQLERVYKFKNFKLAMAFTNKLADAAEEEGHHPGI-LTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDQL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_PSEHT (Putative pterin-4-alpha-carbinolamine dehydratase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=PSHAa2042 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = -2
Query:  177 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAK 500
            M  L+ +KC  C   D   ++++    L+ K+  W     +GI++L R  K K+F + +     V D+AE EGHHP L L  W  V +   +H++ GL +NDFI AAK
Sbjct:    1 MSSLSAQKCEACHA-DAPKVSDEELAQLITKIPDWVPEVRDGIMQLERVYKFKNFKQAIAFTNKVGDMAEDEGHHPGL-LTEWGKVTVTWWSHSIKGLHKNDFICAAK 106          
The following BLAST results are available for this feature:
BLAST of CN186426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
PHS_LEGPC4.673e-1336.94Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_LEGPA4.673e-1336.94Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_LEGPL6.103e-1336.94Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_CHRSD6.103e-1334.82Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_NITOC7.970e-1333.91Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS1_GLOVI7.970e-1335.45Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_SHEPA1.359e-1233.93Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_SHEHH1.359e-1234.82Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_SHEDO1.359e-1234.82Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_PSEHT3.029e-1236.11Putative pterin-4-alpha-carbinolamine dehydratase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002O01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002O01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186426 ID=CN186426; Name=CN186426; organism=Citrus sinensis; type=EST; length=762bp
ATTTTTATTCATAAAAGGAAGCCAAAGATACTTCTTCACCCCCTAGTTCT
TAATAGGGCATCAAAATTATGCTCGGGGTCTCCTTTAAAATGTTTTACAA
AGCCAGCACAAGTTTTGATAATCTCTCAAGCAGAAATCTTTCTCCTCAGT
AGGTGGTGAATATCAAGCCTATTGATCTTAGCAGCAAGTATGAAGTCATT
TTCAGTCAGTCCACCAACTGCATGCGTACATATCTCAATTTGTACATTGT
TCCATCCGACAAGATGAAGGTCTGGATGATGACCTTCTGCTTCAGCAACA
TCTGCTACAAGCTTAAATAACTCCAAACCTTTGGTGAAACTCTTCACTTT
CAAGGATCGGTTCAGCTTCAAGATACCATTTTCATTCACCAAATCCCACC
CTACTACCTTGGGCATTAAGTGCTTAGCACTATCTTCGGCCATGGGACGT
AAGTCCTTTGTGTCACATGGCACACACTTTTTAGTCGTCAAATCGTCCAT
TACGAGCAAACAGGCTTTCAAATACTGATCGTAGAGGTACCTGAGGCCTA
GTCTTGCTTAACATGCTAGAGGTTGTGACCAGAGACATAATGGAGGATGC
TGTTCCAAGTCTGTTAGATTCTAGCCATGGTGGGTCCTATGGAAAAACCG
AGGGAATGACACCCCTTGATCAACAAGTTCATTTTTTTGGTGCACTTGGA
TTTCCAGTTTACCCAGAAACAGAAGCCTGGAAAGAAAAGATCAGAAGACT
TCATCTATTGCT
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