CN186426

Overview
NameCN186426
Unique NameCN186426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9782 contig Csv1_Contig9782:85..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_MICAN (Putative pterin-4-alpha-carbinolamine dehydratase OS=Microcystis aeruginosa (strain NIES-843) GN=MAE_39970 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.956e-12
Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = -2
Query:  177 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAK 500
            M +L  +KC P  +    P+  +    L  K+  W+L+   GI +L +  K  +F   +     V + AE EGHHP L L  W  V +   TH VGGL +NDFI+AA+
Sbjct:    1 MTELAQQKCQPYQSGS-SPITAEEITALQAKIPDWNLLEYEGIPRLQKLYKFANFQGAIAFTNAVGEAAEKEGHHPAL-LTEWGKVTVSWWTHDVGGLHQNDFIMAAR 106          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_THIDA (Putative pterin-4-alpha-carbinolamine dehydratase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=Tbd_1841 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.747e-12
Identity = 40/113 (35.40%), Postives = 64/113 (56.64%), Query Frame = -2
Query:  165 VMDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 503
            ++++L  KKC PC+   + P+ +     ++  + GW     +GI K+ +  K K   +       V  V+  E HHP L +VG+N V++E  THA+ GL+ENDFI AAK++ L
Sbjct:    4 IVEELVRKKCAPCEG-GIAPLTDAQVAPMLKGLSGWQ---RDGI-KIVKEYKFKDHYQAQAFTNAVMWVSHREDHHPYL-IVGYNTVKVEFWTHAIEGLSENDFICAAKVDSL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_SHEFN (Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella frigidimarina (strain NCIMB 400) GN=Sfri_1329 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.812e-12
Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M+ LT  KC  C   D   + +     L+  +  W +   +GI++L R  K K+F   +     +AD+AEAE HHP + L  W  V +   +H++ GL +NDFI+AAK ++L
Sbjct:    1 MNALTEMKCEACQA-DAPKVTDAELAELVGMIPDWGVEIRDGIMQLERVYKFKNFKLAMAFTNKLADLAEAEFHHPGI-LTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDQL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_MARAV (Putative pterin-4-alpha-carbinolamine dehydratase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=Maqu_0976 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.151e-11
Identity = 40/113 (35.40%), Postives = 59/113 (52.21%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKH-LMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M +L  + C  C      P   D+ K  L+  V  W L+ ++G  +L R    K+F +       VAD+AE EGHHP + L+ W    +   TH +GGL +NDFI+AA+ + L
Sbjct:    1 MSNLGQQSCSACSAD--APQVTDAEKQTLLKDVPEWQLIVQDGEEQLQRVFTFKNFVQAQAFTNKVADLAEEEGHHPAI-LLEWGKATVRWWTHKIGGLHKNDFIMAARTDEL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_DECAR (Putative pterin-4-alpha-carbinolamine dehydratase OS=Dechloromonas aromatica (strain RCB) GN=Daro_0453 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.503e-11
Identity = 35/110 (31.82%), Postives = 65/110 (59.09%), Query Frame = -2
Query:  165 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 494
            +L  ++C PC+   + P+    A  ++  + GW L  +    +L+++   ++  + +     +A V+  E HHP+L +VG+ +V++   THA+GGL+ENDFI AAK+ +L
Sbjct:    6 NLADRQCTPCEG-GIAPLENSVAAVMLDTLPGWTLDGQ----RLDKTYVFRNHYEAMAFVNAIAWVSHRENHHPEL-IVGYKDVRVRYWTHAIGGLSENDFICAAKLEKL 109          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_SHESM (Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella sp. (strain MR-4) GN=Shewmr4_2606 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M  LT  KC  C   D   + ++    L+  +  W +   +GI++L R  K K+F   +     +AD+AE E HHP + L  W  V +   +H++ GL +NDFI+AAK ++L
Sbjct:    1 MTALTQMKCEACQA-DAPKVTDEELAELIRMIPDWGVQVRDGIMQLERVYKFKNFKLAMAFTNKLADLAEEEFHHPGI-LTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDQL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_SHELP (Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=Shew_1436 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 38/112 (33.93%), Postives = 59/112 (52.68%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M +L   KC  C   D   + +     L+  +  W +   +GI++L R  K K+F   +E    +AD+AE E HHP + L  W  V +   +H++ GL  NDFI+AAK ++L
Sbjct:    1 MTELAQMKCEACQA-DAPKVTDAELAELIRMIPDWGVEVRDGIMQLERVYKFKNFKLAMEFTNKLADLAEEEFHHPGI-LTEWGKVTVTWWSHSIKGLHRNDFIMAAKTDQL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_AZOVD (Putative pterin-4-alpha-carbinolamine dehydratase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=Avin_34660 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M  L+   C  C   D   ++E     L+ ++  W + N +GIL+L +    ++F + L     V  +AEAEGHHP L L  W  V +   TH + GL  NDFI+AA+ + L
Sbjct:    1 MTVLSQAHCEACRA-DAPKVSEQELADLIRQIPDWRVENRDGILQLEKVFAFRNFARALAFTDAVGALAEAEGHHPAL-LTEWGRVTVTWWTHKIRGLHRNDFIMAARTDEL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_AERS4 (Putative pterin-4-alpha-carbinolamine dehydratase OS=Aeromonas salmonicida (strain A449) GN=ASA_2419 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.349e-11
Identity = 37/112 (33.04%), Postives = 59/112 (52.68%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M +L +++C  C   D   ++E     LM  +  W  +   G L+L R    ++F + L     + ++AEAE HHP + L  W  V +   TH +GGL  NDFI+AA+ ++L
Sbjct:    1 MSELASQQCEACRA-DAPKVSEQELSELMHLIPDWQPLVVKGELQLRREFTFRNFKEALAFTNRLGELAEAEFHHPAI-LTEWGKVTVSWWTHKIGGLHRNDFIMAARTDQL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_SHESA (Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella sp. (strain ANA-3) GN=Shewana3_2780 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M  LT  KC  C   D   + +     L+  V  W +   +GI++L R  K K+F   +     +AD+AE E HHP + L  W  V +   +H++ GL +NDFI+AAK ++L
Sbjct:    1 MTALTQMKCEACQA-DAPKVTDAELAELIRMVPDWGVQVRDGIMQLERVYKFKNFKLAMAFTNKLADLAEEEFHHPGI-LTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDQL 110          
The following BLAST results are available for this feature:
BLAST of CN186426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
PHS_MICAN3.956e-1236.11Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_THIDA6.747e-1235.40Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_SHEFN8.812e-1234.82Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_MARAV1.151e-1135.40Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_DECAR1.503e-1131.82Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_SHESM1.963e-1133.93Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_SHELP1.963e-1133.93Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_AZOVD2.564e-1134.82Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_AERS43.349e-1133.04Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_SHESA4.373e-1134.82Putative pterin-4-alpha-carbinolamine dehydratase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002O01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002O01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186426 ID=CN186426; Name=CN186426; organism=Citrus sinensis; type=EST; length=762bp
ATTTTTATTCATAAAAGGAAGCCAAAGATACTTCTTCACCCCCTAGTTCT
TAATAGGGCATCAAAATTATGCTCGGGGTCTCCTTTAAAATGTTTTACAA
AGCCAGCACAAGTTTTGATAATCTCTCAAGCAGAAATCTTTCTCCTCAGT
AGGTGGTGAATATCAAGCCTATTGATCTTAGCAGCAAGTATGAAGTCATT
TTCAGTCAGTCCACCAACTGCATGCGTACATATCTCAATTTGTACATTGT
TCCATCCGACAAGATGAAGGTCTGGATGATGACCTTCTGCTTCAGCAACA
TCTGCTACAAGCTTAAATAACTCCAAACCTTTGGTGAAACTCTTCACTTT
CAAGGATCGGTTCAGCTTCAAGATACCATTTTCATTCACCAAATCCCACC
CTACTACCTTGGGCATTAAGTGCTTAGCACTATCTTCGGCCATGGGACGT
AAGTCCTTTGTGTCACATGGCACACACTTTTTAGTCGTCAAATCGTCCAT
TACGAGCAAACAGGCTTTCAAATACTGATCGTAGAGGTACCTGAGGCCTA
GTCTTGCTTAACATGCTAGAGGTTGTGACCAGAGACATAATGGAGGATGC
TGTTCCAAGTCTGTTAGATTCTAGCCATGGTGGGTCCTATGGAAAAACCG
AGGGAATGACACCCCTTGATCAACAAGTTCATTTTTTTGGTGCACTTGGA
TTTCCAGTTTACCCAGAAACAGAAGCCTGGAAAGAAAAGATCAGAAGACT
TCATCTATTGCT
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