CN186426

Overview
NameCN186426
Unique NameCN186426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9782 contig Csv1_Contig9782:85..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_AERHH (Putative pterin-4-alpha-carbinolamine dehydratase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=AHA_1884 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M +L +++C  C   D   ++E     LM  +  W  +   G L+L R    ++F + L     + ++AEAE HHP + L  W  V +   TH +GGL  NDFI+AA+ + L
Sbjct:    1 MSELASQQCEACRA-DAPKVSEQELNELMRLIPDWQPLVVKGELQLRREFTFRNFKEALAFTNRLGELAEAEFHHPAI-LTEWGKVTVSWWTHKIGGLHRNDFIMAARTDEL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS1_RALEJ (Putative pterin-4-alpha-carbinolamine dehydratase 1 OS=Ralstonia eutropha (strain JMP134) GN=Reut_A0417 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = -2
Query:  165 DDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 497
            + L ++ C PC    + P+    A+ L+ +  GW L ++ G  +L RS   ++F + LE    V  +AE +GHHP++   GW +  +   T  + GL  NDF++AAK + L
Sbjct:    3 EKLESQTCTPC-RGGIPPLERAEAEALLVETPGWTLADDAG--RLERSFTFRNFAQALEFVSGVGRLAEEQGHHPEISF-GWGHATVSWRTKKIKGLHRNDFVMAAKTSEL 109          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_HALLT (Putative pterin-4-alpha-carbinolamine dehydratase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=Hlac_1646 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.712e-11
Identity = 34/95 (35.79%), Postives = 59/95 (62.11%), Query Frame = -2
Query:  165 PMAEDS-AKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 446
            P+ +D  A++L      W++V+++    L  + +   F   L     + ++AEAEGHHPDLHL  W  V +E+ +H +GGL E+DF++AA+++R+
Sbjct:   19 PLTDDEYAEYLAELGPVWEVVDDH---HLEATYEFDDFADALAFTNEIGELAEAEGHHPDLHL-SWGEVGVEMWSHDIGGLHESDFVMAARMDRI 109          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_SHEPW (Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=swp_1651 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M +L   KC  C   D   +++     L+  +  W +   +GI++L R  K K+F   +     +AD+AEA+ HHP + L  W  V +   +H++ GL +NDFI+AAK + L
Sbjct:    1 MTELAQMKCEACQA-DAPKVSDAELGELVRMIPDWTVEVRDGIMQLERVYKFKNFKLAMAFTNKLADLAEADFHHPGI-LTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDTL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_VIBC3 (Putative pterin-4-alpha-carbinolamine dehydratase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=phhB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 36/113 (31.86%), Postives = 66/113 (58.41%), Query Frame = -2
Query:  165 VMDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 503
            ++D+L   +C  C    +   +E+  + L+ ++ GW L++ +GI +L +  + K+F +       +A++AE E HHP + L+ W NV +   +H++ GL +NDFI AAK + L
Sbjct:    1 MLDEL---RCEACSAGAIGLTSEEQ-QQLLSELDGWALIHRDGIAQLEKRYRFKNFKQAWAFSNQIAELAEQEFHHPAI-LLEWGNVTVTWWSHSIKGLHKNDFICAAKCDAL 108          
The following BLAST results are available for this feature:
BLAST of CN186426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
PHS_AERHH4.373e-1133.04Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS1_RALEJ4.373e-1132.43Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_HALLT5.712e-1135.79Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_SHEPW7.460e-1133.04Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_VIBC39.743e-1131.86Putative pterin-4-alpha-carbinolamine dehydratase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002O01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002O01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186426 ID=CN186426; Name=CN186426; organism=Citrus sinensis; type=EST; length=762bp
ATTTTTATTCATAAAAGGAAGCCAAAGATACTTCTTCACCCCCTAGTTCT
TAATAGGGCATCAAAATTATGCTCGGGGTCTCCTTTAAAATGTTTTACAA
AGCCAGCACAAGTTTTGATAATCTCTCAAGCAGAAATCTTTCTCCTCAGT
AGGTGGTGAATATCAAGCCTATTGATCTTAGCAGCAAGTATGAAGTCATT
TTCAGTCAGTCCACCAACTGCATGCGTACATATCTCAATTTGTACATTGT
TCCATCCGACAAGATGAAGGTCTGGATGATGACCTTCTGCTTCAGCAACA
TCTGCTACAAGCTTAAATAACTCCAAACCTTTGGTGAAACTCTTCACTTT
CAAGGATCGGTTCAGCTTCAAGATACCATTTTCATTCACCAAATCCCACC
CTACTACCTTGGGCATTAAGTGCTTAGCACTATCTTCGGCCATGGGACGT
AAGTCCTTTGTGTCACATGGCACACACTTTTTAGTCGTCAAATCGTCCAT
TACGAGCAAACAGGCTTTCAAATACTGATCGTAGAGGTACCTGAGGCCTA
GTCTTGCTTAACATGCTAGAGGTTGTGACCAGAGACATAATGGAGGATGC
TGTTCCAAGTCTGTTAGATTCTAGCCATGGTGGGTCCTATGGAAAAACCG
AGGGAATGACACCCCTTGATCAACAAGTTCATTTTTTTGGTGCACTTGGA
TTTCCAGTTTACCCAGAAACAGAAGCCTGGAAAGAAAAGATCAGAAGACT
TCATCTATTGCT
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