CN186398

Overview
NameCN186398
Unique NameCN186398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12355 contig Csv1_Contig12355:28..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 288.886 bits (738), Expect = 1.866e-77
Identity = 140/224 (62.50%), Postives = 171/224 (76.34%), Query Frame = 1
Query:   52 PVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            P V  +Y K ++K RR LR LIA KNCAPIM+RLAWH AGT+D  ++TGGP G++R + E +HG+N+G+ IAL   + ++ + P I++AD +QLAGVVAVEVTGGP + F PGR+D    P EGRLPDA +G  HLRD+F + MGLSDKDIVALSG HTLGR H +RSGF+G WT  PL FDNSYF ELL+GE EGLLQL +DKALL+DP FR  VE YA DED
Sbjct:    6 PTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFDAEQAHGANSGIHIALRLLDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADED 229          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX7_ORYSJ (Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.391e-56
Identity = 118/239 (49.37%), Postives = 147/239 (61.51%), Query Frame = 1
Query:   79 EIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKT----GGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD---SKISPKEGRLPDAKRGAP--HLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGP----------------WTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            E+  AR D+R L+   +C PI++RL WHD+GTYD N K     GG NGS+R + E  HG+N GL  AL   + +K K+P I+YADL+QLA   A+E  GGP +    GR D    +  P EG+LPDA   AP  HLR +FYRMGL DK+IV LSG HTLGR+ PERSG+  P                WT E LKFDNSYF E+     + LL LPTD AL EDP F+ Y E YA+D++
Sbjct:   91 ELKAAREDIRELLKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQE 329          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX8_ORYSJ (Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.816e-56
Identity = 121/251 (48.21%), Postives = 154/251 (61.35%), Query Frame = 1
Query:   43 MALPVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKT----GGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD---SKISPKEGRLPDAKRGAP--HLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGF---------DGP-------WTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            MA   V      ++  AR D+R ++    C PIM+RL WHD+GTYD N +     GG +GS+R + E SHG+N GL  AL   + +K K+P ITYADL+QLA   A+E  GGP +    GR D   ++  P EGRLPDA    P  HLR++FYRMGL DK+IVALSG HTLGR+ P+RSG+         DGP       WT E LKFDNSYF ++     + LL LPTD AL EDP F+ Y E YA+D++
Sbjct:   78 MAAAAVAASDAAQLKSAREDIREILKTTYCHPIMVRLGWHDSGTYDKNIEEWPQRGGADGSLRFDAELSHGANAGLINALKLIQPIKDKYPGITYADLFQLASATAIEEAGGPKIPMKYGRVDVTAAEQCPPEGRLPDAGPRVPADHLREVFYRMGLDDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGEPGGQSWTVEWLKFDNSYFKDIKEQRDQDLLVLPTDAALFEDPSFKVYAEKYAEDQE 328          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APXS_ARATH (L-ascorbate peroxidase S, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=APXS PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.177e-55
Identity = 117/239 (48.95%), Postives = 150/239 (62.76%), Query Frame = 1
Query:   79 EIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKT----GGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDS---KISPKEGRLPDAKRGAP--HLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGP----------------WTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            ++  AR D++ L++ K C PI++RL WHDAGTY+ N K     GG NGS+R + E  H +N GL  AL+  +++K K+  I+YADL+QLA   A+E  GGP +    GR D+   +  P+EGRLPDA   +P  HLR++FYRMGL DKDIVALSG HTLGR+ PERSG+  P                WT E LKFDNSYF E+     E LL LPTD A+ ED  F+ Y E YA D+D
Sbjct:  106 QLKNAREDIKELLSTKFCHPILVRLGWHDAGTYNKNIKEWPQRGGANGSLRFDIELKHAANAGLVNALNLIKDIKEKYSGISYADLFQLASATAIEEAGGPKIPMKYGRVDASGPEDCPEEGRLPDAGPPSPATHLREVFYRMGLDDKDIVALSGAHTLGRSRPERSGWGKPETKYTKEGPGAPGGQSWTPEWLKFDNSYFKEIKEKRDEDLLVLPTDAAIFEDSSFKVYAEKYAADQD 344          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX6_ORYSJ (Probable L-ascorbate peroxidase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=APX6 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.630e-55
Identity = 117/239 (48.95%), Postives = 145/239 (60.67%), Query Frame = 1
Query:   79 EIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNT----KTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD---SKISPKEGRLPDAKRGAP--HLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGP----------------WTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            E+  AR D++ L+   +C PI++RL WHDAGTYD N     K GG NGS+R E E  H +N GL  AL   + +K KH  +TYADL+QLA   A+E  GGP +  + GR D    +  P EGRLP A   +P  HLR++FYRMGLSDK+IVALSG HTLGR+ PERSG+  P                WT + LKFDNSYF ++     E LL LPTD  L ED  F+ Y E YA D+D
Sbjct:   42 ELRGAREDVKQLLKSTSCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFEIELKHAANAGLVNALKLIQPIKDKHAGVTYADLFQLASATAIEEAGGPKIPMIYGRVDVAAPEQCPPEGRLPAAGPPSPAEHLREVFYRMGLSDKEIVALSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDSSFKIYAEKYAADQD 280          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APXT_ARATH (L-ascorbate peroxidase T, chloroplastic OS=Arabidopsis thaliana GN=APXT PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 9.965e-55
Identity = 115/237 (48.52%), Postives = 147/237 (62.03%), Query Frame = 1
Query:   79 EIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKT----GGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD---SKISPKEGRLPDAKRGAP--HLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGP----------------WTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKD 714
            ++  A+ D++ L+  K C PI++RL WHDAGTY+ N +     GG NGS+R E E  H +N GL  AL   + +K K+P I+YADL+QLA   A+E  GGP +    GR D    +  P+EGRLPDA   +P  HLRD+FYRMGL DK+IVALSG HTLGRA P+RSG+  P                WT + LKFDNSYF ++     + LL LPTD AL EDP F+ Y E YA+D
Sbjct:   85 QLISAKEDIKVLLRTKFCHPILVRLGWHDAGTYNKNIEEWPLRGGANGSLRFEAELKHAANAGLLNALKLIQPLKDKYPNISYADLFQLASATAIEEAGGPDIPMKYGRVDVVAPEQCPEEGRLPDAGPPSPADHLRDVFYRMGLDDKEIVALSGAHTLGRARPDRSGWGKPETKYTKTGPGEAGGQSWTVKWLKFDNSYFKDIKEKRDDDLLVLPTDAALFEDPSFKNYAEKYAED 321          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX5_ORYSJ (Probable L-ascorbate peroxidase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=APX5 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.946e-54
Identity = 117/239 (48.95%), Postives = 144/239 (60.25%), Query Frame = 1
Query:   79 EIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNT----KTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD---SKISPKEGRLPDAKRGAP--HLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGP----------------WTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            E+  AR D+R L+    C PI++RL WHDAGTYD N     K GG NGS+R   E  H +N GL  AL     +K+K+  +TYAD++QLA   A+E  GGP +  + GR D    +  P EGRLP A   +P  HLR++FYRMGLSDK+IVALSG HTLGRA PERSG+  P                WT E LKFDNSYF E+     E LL LPTD  L ED  F+ + E YA+D+D
Sbjct:   53 ELRAAREDVRQLLKSNPCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFGVELVHAANKGLLKALFLVIPIKSKYAGVTYADIFQLASATAIEEAGGPKIPMIYGRADVADGEECPPEGRLPAADPPSPAEHLREVFYRMGLSDKEIVALSGAHTLGRARPERSGWGKPETKYTENGPGAPGGQSWTSEWLKFDNSYFKEIKERRDEDLLVLPTDAVLFEDSSFKIHAEKYAEDQD 291          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: CCPR2_EMENI (Putative heme-binding peroxidase OS=Emericella nidulans GN=AN5440 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.459e-54
Identity = 116/247 (46.96%), Postives = 149/247 (60.32%), Query Frame = 1
Query:   79 EIDKARRDLRALIAYK-----NCAPIMLRLAWHDAGTYDVNTKTGGPNGS-IRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----SKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGE-----------------------SEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            + +  RRD+ A +        +  P+ +RLAWH +GTYD  + TGG NG+ +R E E    +N GL+    F E VK KHP ITY+DL+ LAGVVA+E  GGP + ++PGR D    SK+ P+ GRLPD  +GA HLR IFYRMG +D++IVAL+GGH LGR H +RSGF GPW   P +F N +F  LLN E                        E L+ LPTD AL +DP FR +VE YAKD+D
Sbjct:    6 DYNAVRRDIAAQLKKPGYDDGSAGPVFVRLAWHSSGTYDAASDTGGSNGAGMRYEAEGGDPANAGLQHGRAFLEPVKEKHPWITYSDLWTLAGVVAIEEMGGPKIPWLPGRTDFVDDSKVPPR-GRLPDGAQGADHLRFIFYRMGFNDQEIVALAGGHNLGRCHADRSGFQGPWVNNPTRFSNQFFKLLLNMEWKPKTLENGVSQFVYIDPEAEDHEEPLMMLPTDVALRDDPAFRPWVERYAKDKD 251          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: CCPR2_ASPFU (Putative heme-binding peroxidase OS=Aspergillus fumigatus GN=AFUA_6G13570 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.102e-53
Identity = 120/247 (48.58%), Postives = 150/247 (60.73%), Query Frame = 1
Query:   79 EIDKARRDLRALIAYK-----NCAPIMLRLAWHDAGTYDVNTKTGGPNGS-IRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----SKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELL----------NGES-------------EGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            + D  R+D+ A +        +  P+ +RLAWH AGTYD+ T TGG NG+ +R E E    +N GL+    F E VK KHP ITYADL+ LAGVVA+E  GGP V + PGR D    SK+ P+ GRLPDA +GA HLR +FYRMG +D++IVAL+GGHTLGR H +RSGF GPW   P +F N +F  LL          NG S             E L+ LPTD AL  DP FR +V+ YA D+D
Sbjct:    6 DYDAVRKDIIAQLKKPGYDDGSAGPVFVRLAWHSAGTYDLETDTGGSNGAGMRYEAEGGDPANAGLQHGRAFLEPVKEKHPWITYADLWTLAGVVAIEALGGPKVVWKPGRTDLVDDSKVPPR-GRLPDATQGAEHLRAVFYRMGFNDQEIVALAGGHTLGRCHIDRSGFQGPWVNNPTRFSNQFFKLLLTLDWKPKTLPNGISQFVYVDPDAEEGDEPLMMLPTDIALKTDPAFRVWVDKYAADKD 251          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: CCPR_ASPFU (Cytochrome c peroxidase, mitochondrial OS=Aspergillus fumigatus GN=ccp1 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.454e-53
Identity = 111/239 (46.44%), Postives = 152/239 (63.60%), Query Frame = 1
Query:   67 EYLKEIDKARRDLRALIAYKNCA--PIMLRLAWHDAGTYDVNTKTGGPNGS-IRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISP--KEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELL---------NGESE-------GLLQLPTDKALLEDPEFRRYVELYAKDED 720
            +Y K  D   R L     Y + +  P+++RLAWH +GTYD  T TGG NG+ +R   E  HG+N GLKIA DF E +KA+ P I+Y+DL+ LAG  A++  GGPT+ + PGR+D  ++    +GRLPDA +   H+RDIFYRMG +D++IVAL G H LGRAHP+RSG+DGPW   P  F N +F  L+         NG ++        L+ LP D AL++D EF+++VE YA+D D
Sbjct:   94 DYQKVYDAIARRLADETDYDDGSYGPVLVRLAWHASGTYDKETGTGGSNGATMRFAPESDHGANAGLKIARDFLEPIKAQFPWISYSDLWTLAGACAIQELGGPTIPWRPGRQDKDVAACTPDGRLPDASKDQRHIRDIFYRMGFNDQEIVALIGAHALGRAHPDRSGYDGPWDFSPTVFTNEFFRLLVDEKWQNRKWNGPAQFTDKTTKTLMMLPADLALIKDKEFKKHVERYARDSD 332          
The following BLAST results are available for this feature:
BLAST of CN186398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
APX1_ARATH1.866e-7762.50L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX7_ORYSJ1.391e-5649.37Probable L-ascorbate peroxidase 7, chloroplastic O... [more]
APX8_ORYSJ1.816e-5648.21Probable L-ascorbate peroxidase 8, chloroplastic O... [more]
APXS_ARATH1.177e-5548.95L-ascorbate peroxidase S, chloroplastic/mitochondr... [more]
APX6_ORYSJ7.630e-5548.95Probable L-ascorbate peroxidase 6, chloroplastic O... [more]
APXT_ARATH9.965e-5548.52L-ascorbate peroxidase T, chloroplastic OS=Arabido... [more]
APX5_ORYSJ4.946e-5448.95Probable L-ascorbate peroxidase 5, chloroplastic O... [more]
CCPR2_EMENI6.459e-5446.96Putative heme-binding peroxidase OS=Emericella nid... [more]
CCPR2_ASPFU1.102e-5348.58Putative heme-binding peroxidase OS=Aspergillus fu... [more]
CCPR_ASPFU2.454e-5346.44Cytochrome c peroxidase, mitochondrial OS=Aspergil... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186398 ID=CN186398; Name=CN186398; organism=Citrus sinensis; type=EST; length=720bp
GAGGGTAAACTGTCAAAAGGTCGTTACAGAAAAAGAGCTCCGATGGCTTT
ACCGGTCGTTGACACAGAGTACCTGAAGGAGATCGACAAGGCTCGTCGCG
ATCTCCGCGCTCTTATCGCTTACAAGAACTGTGCTCCAATCATGCTCCGT
CTAGCGTGGCACGACGCGGGAACATATGACGTGAACACGAAGACTGGTGG
ACCAAATGGCTCGATAAGGAACGAAGAGGAGTACTCTCATGGCTCCAACA
ATGGCTTGAAAATCGCTCTTGATTTTTGTGAGGAAGTGAAGGCTAAACAT
CCAAAAATAACATATGCAGACCTATACCAGCTTGCGGGTGTTGTTGCAGT
TGAGGTCACTGGAGGTCCTACAGTCGACTTTGTTCCTGGTAGAAAGGATT
CAAAAATTTCTCCCAAGGAAGGGCGTCTTCCAGATGCCAAACGAGGTGCA
CCTCATCTGAGGGATATCTTTTATCGGATGGGTCTGTCTGACAAGGATAT
AGTGGCACTCTCAGGGGGCCATACTTTGGGAAGGGCACATCCAGAGAGAT
CAGGTTTTGACGGCCCTTGGACCAGGGAGCCTCTGAAATTTGATAACTCA
TACTTTGTGGAGTTGCTGAATGGGGAATCAGAAGGATTACTGCAACTTCC
AACAGACAAGGCTTTATTAGAAGACCCTGAGTTCCGTCGTTATGTTGAGT
TGTATGCAAAGGATGAGGAT
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