CN186398

Overview
NameCN186398
Unique NameCN186398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12355 contig Csv1_Contig12355:28..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: CCPR_YEAST (Cytochrome c peroxidase, mitochondrial OS=Saccharomyces cerevisiae GN=CCP1 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.175e-37
Identity = 79/218 (36.24%), Postives = 125/218 (57.34%), Query Frame = 1
Query:  121 YKNCAPIMLRLAWHDAGTYDVNTKTGGP-NGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSK--ISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGE---------------SEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            Y    P+++RLAWH +GT+D +  TGG   G+ R ++E++  SN GL+    F E +  + P I+  DL+ L GV AV+   GP + +  GR D+    +P  GRLPDA + A ++R  F R+ ++D+++VAL G H LG+ H + SG++GPW      F N +++ LLN +                 G + LPTD +L++DP++   V+ YA D+D
Sbjct:  106 YIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQD 323          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28
Identity = 81/211 (38.39%), Postives = 118/211 (55.92%), Query Frame = 1
Query:  115 IAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKI---TYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELL------NGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            +  K  A  +LRL +HDAGT++++  +GG NGSI  E E     N GLK +L    + K K  +I   ++AD+  +AG  AV + GGPT+  V GR DS     EG+LP     A  L++ F R G S +++VALSG HT+G       GF      +P  FDN+Y+  LL        +   ++ LP+D AL++D E  R+V+ YA+D+D
Sbjct:  108 VVTKGKAAGVLRLVFHDAGTFELDDHSGGINGSIAYELE--RPENIGLKKSLKVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECFKRKGFSTQELVALSGAHTIG-----SKGFG-----DPTVFDNAYYKILLEKPWTSTSKMTSMVGLPSDHALVQDDECLRWVKRYAEDQD 306          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_ERYLH (Catalase-peroxidase OS=Erythrobacter litoralis (strain HTCC2594) GN=katG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16
Identity = 86/315 (27.30%), Postives = 115/315 (36.51%), Query Frame = 1
Query:  121 YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPK-ITYADLYQLAGVVAVEVTGGPTVDFVPGRKD---------------------SKISPKEGRL----------------PDAKRGAPH--------LRDIFYRMGLSDKDIVAL-SGGHTLGRAH-----------PE------------------------RSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLP---------------------------------TDKALLEDPEFRRYVELYAKDE 717
            Y +  P  +R+AWH AGTY      GG + G  R     S   N  L  A      +K K+ K I++ADL+ L G VA+E  GGP   F  GRKD                     ++I P EGR                 P+   G PH        +R+ F RM ++D++ VAL +GGH  G+ H           PE                         SG +GPWT  P ++ N YF  L   E E L Q P                                  D AL  DP++R+  E +  D+
Sbjct:   90 YGHYGPFFIRMAWHAAGTYRTGDGRGGSSSGQQRFAPLNSWPDNGNLDKARRLLWPIKQKYGKHISWADLFILTGNVAIESMGGPVFGFGGGRKDVYEPEMVYWGTEEQWVDTGAETRIHPDEGRALENPLAAIQMGLIYVNPEGPGGDPHDPEGMARDMRETFARMAMNDEETVALTAGGHAFGKCHGAKPADTFGTAPEGENLHLMGMGWLTDEEEIRNGHVTTSGIEGPWTPNPTQWGNDYFRLLFKYEYE-LTQSPAGAYQWTPVDPEEADMAPDARDPSKKVPTIMTTADMALKRDPDYRKISERFRDDQ 403          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPN (Catalase-peroxidase 2 OS=Legionella pneumophila GN=katG2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14
Identity = 61/187 (32.62%), Postives = 84/187 (44.92%), Query Frame = 1
Query:  121 YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSI-RNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPERSG 555
            Y N  P+ +R++WH AGTY +    GG NG   R   + S   N  L  A      +K K+  KI++ADL  LAG VA+E  G  T+ F  GR+D                 SK   K+G+L                      PD    A  +R+ F RM ++D++ VAL +GGH  G+ H   SG
Sbjct:   95 YGNYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFGRMAMNDEETVALIAGGHAFGKTHGAASG 281          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPH (Catalase-peroxidase 2 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=katG2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14
Identity = 61/187 (32.62%), Postives = 84/187 (44.92%), Query Frame = 1
Query:  121 YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSI-RNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPERSG 555
            Y N  P+ +R++WH AGTY +    GG NG   R   + S   N  L  A      +K K+  KI++ADL  LAG VA+E  G  T+ F  GR+D                 SK   K+G+L                      PD    A  +R+ F RM ++D++ VAL +GGH  G+ H   SG
Sbjct:   95 YGNYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFGRMAMNDEETVALIAGGHAFGKTHGAASG 281          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPC (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Corby) GN=katG2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14
Identity = 61/187 (32.62%), Postives = 84/187 (44.92%), Query Frame = 1
Query:  121 YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSI-RNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPERSG 555
            Y N  P+ +R++WH AGTY +    GG NG   R   + S   N  L  A      +K K+  KI++ADL  LAG VA+E  G  T+ F  GR+D                 SK   K+G+L                      PD    A  +R+ F RM ++D++ VAL +GGH  G+ H   SG
Sbjct:   95 YGNYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFGRMAMNDEETVALIAGGHAFGKTHGAASG 281          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPA (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Paris) GN=katG2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14
Identity = 61/187 (32.62%), Postives = 84/187 (44.92%), Query Frame = 1
Query:  121 YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSI-RNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPERSG 555
            Y N  P+ +R++WH AGTY +    GG NG   R   + S   N  L  A      +K K+  KI++ADL  LAG VA+E  G  T+ F  GR+D                 SK   K+G+L                      PD    A  +R+ F RM ++D++ VAL +GGH  G+ H   SG
Sbjct:   95 YGNYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFGRMAMNDEETVALIAGGHAFGKTHGAASG 281          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_COLP3 (Catalase-peroxidase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=katG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14
Identity = 80/303 (26.40%), Postives = 114/303 (37.62%), Query Frame = 1
Query:  136 PIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNN-GLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVA-LSGGHTLGRAHPER------------------------------------SGFDGPWTREPLKFDNSYFVELLN--------------------------------GESEGLLQLPTDKALLEDPEFRRYVELYAKD 714
            P+M+R+AWH AG Y V+   GG +G  +     +   +N  L  A      VK K+  KI++ADL  L+G VA+E  G  T  F  GR D                  K   K+G+L                      PD    A  +R  F RM ++D++IVA L+GGHTLG+AH  +                                    SG +G WT  P ++ ++Y   L+N                                 +    +   TD AL EDP+FR+ VE +  D
Sbjct:   99 PLMIRMAWHSAGVYRVHDGRGGASGGQQRFAPLNSWPDNVNLDKARRLLWPVKQKYGRKISWADLMVLSGNVALESMGFKTFGFAGGRTDDWEPDLVYWGPETAMLSDKRRDKKGKLKGPLAAVEMGLIYVNPEGPHGKPDPLLAANDIRMSFGRMAMNDEEIVALLAGGHTLGKAHGAKKPNGCVGAEPAAADIEAQGLGWKNKCGTGVGADTISSGLEGAWTVTPTQWSSNYLDNLMNFNWVLTKSPAGAKQWIPDNKAAANLVPDAHIPNKRHAPIMFTTDIALKEDPQFRKIVERFRAD 401          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPL (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Lens) GN=katG2 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14
Identity = 61/187 (32.62%), Postives = 83/187 (44.39%), Query Frame = 1
Query:  121 YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSI-RNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPERSG 555
            Y N  P+ +R++WH AGTY +    GG NG   R   + S   N  L  A      +K K+  KI++ADL  LAG VA+E  G  T+ F  GR+D                 SK   K G+L                      PD    A  +R+ F RM ++D++ VAL +GGH  G+ H   SG
Sbjct:   95 YGNYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGTEGKWLESKRQDKVGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFGRMAMNDEETVALIAGGHAFGKTHGAASG 281          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_YERPS (Catalase-peroxidase OS=Yersinia pseudotuberculosis GN=katG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 72/269 (26.77%), Postives = 104/269 (38.66%), Query Frame = 1
Query:   79 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGE 627
            +++  ++D++ ++          Y N  P  +R+AWH AGTY +    GG + G  R E   S   N  L  A      +K K+  KI++ DL  L G VA+E  G  T+ F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ VAL +GGHT G+AH    PE+                                SG +G WT +P  F   Y   L   E
Sbjct:   67 DLEAVKKDIKTVLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLMVLTGNVALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAKDIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDPTHFTMQYLSNLYKHE 335          
The following BLAST results are available for this feature:
BLAST of CN186398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
CCPR_YEAST7.175e-3736.24Cytochrome c peroxidase, mitochondrial OS=Saccharo... [more]
APX6_ARATH2.733e-2838.39Putative L-ascorbate peroxidase 6 OS=Arabidopsis t... [more]
KATG_ERYLH3.134e-1627.30Catalase-peroxidase OS=Erythrobacter litoralis (st... [more]
KATG2_LEGPN1.008e-1432.62Catalase-peroxidase 2 OS=Legionella pneumophila GN... [more]
KATG2_LEGPH1.008e-1432.62Catalase-peroxidase 2 OS=Legionella pneumophila su... [more]
KATG2_LEGPC1.008e-1432.62Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG2_LEGPA1.008e-1432.62Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG_COLP31.317e-1426.40Catalase-peroxidase OS=Colwellia psychrerythraea (... [more]
KATG2_LEGPL2.933e-1432.62Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG_YERPS6.534e-1426.77Catalase-peroxidase OS=Yersinia pseudotuberculosis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186398 ID=CN186398; Name=CN186398; organism=Citrus sinensis; type=EST; length=720bp
GAGGGTAAACTGTCAAAAGGTCGTTACAGAAAAAGAGCTCCGATGGCTTT
ACCGGTCGTTGACACAGAGTACCTGAAGGAGATCGACAAGGCTCGTCGCG
ATCTCCGCGCTCTTATCGCTTACAAGAACTGTGCTCCAATCATGCTCCGT
CTAGCGTGGCACGACGCGGGAACATATGACGTGAACACGAAGACTGGTGG
ACCAAATGGCTCGATAAGGAACGAAGAGGAGTACTCTCATGGCTCCAACA
ATGGCTTGAAAATCGCTCTTGATTTTTGTGAGGAAGTGAAGGCTAAACAT
CCAAAAATAACATATGCAGACCTATACCAGCTTGCGGGTGTTGTTGCAGT
TGAGGTCACTGGAGGTCCTACAGTCGACTTTGTTCCTGGTAGAAAGGATT
CAAAAATTTCTCCCAAGGAAGGGCGTCTTCCAGATGCCAAACGAGGTGCA
CCTCATCTGAGGGATATCTTTTATCGGATGGGTCTGTCTGACAAGGATAT
AGTGGCACTCTCAGGGGGCCATACTTTGGGAAGGGCACATCCAGAGAGAT
CAGGTTTTGACGGCCCTTGGACCAGGGAGCCTCTGAAATTTGATAACTCA
TACTTTGTGGAGTTGCTGAATGGGGAATCAGAAGGATTACTGCAACTTCC
AACAGACAAGGCTTTATTAGAAGACCCTGAGTTCCGTCGTTATGTTGAGT
TGTATGCAAAGGATGAGGAT
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