CN186398

Overview
NameCN186398
Unique NameCN186398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12355 contig Csv1_Contig12355:28..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_YERPP (Catalase-peroxidase OS=Yersinia pestis (strain Pestoides F) GN=katG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 72/269 (26.77%), Postives = 104/269 (38.66%), Query Frame = 1
Query:   79 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGE 627
            +++  ++D++ ++          Y N  P  +R+AWH AGTY +    GG + G  R E   S   N  L  A      +K K+  KI++ DL  L G VA+E  G  T+ F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ VAL +GGHT G+AH    PE+                                SG +G WT +P  F   Y   L   E
Sbjct:   67 DLEAVKKDIKTVLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLMVLTGNVALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAKDIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDPTHFTMQYLSNLYKHE 335          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_YERPN (Catalase-peroxidase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=katG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 72/269 (26.77%), Postives = 104/269 (38.66%), Query Frame = 1
Query:   79 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGE 627
            +++  ++D++ ++          Y N  P  +R+AWH AGTY +    GG + G  R E   S   N  L  A      +K K+  KI++ DL  L G VA+E  G  T+ F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ VAL +GGHT G+AH    PE+                                SG +G WT +P  F   Y   L   E
Sbjct:   67 DLEAVKKDIKTVLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLMVLTGNVALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAKDIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDPTHFTMQYLSNLYKHE 335          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_YERPG (Catalase-peroxidase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=katG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 72/269 (26.77%), Postives = 104/269 (38.66%), Query Frame = 1
Query:   79 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGE 627
            +++  ++D++ ++          Y N  P  +R+AWH AGTY +    GG + G  R E   S   N  L  A      +K K+  KI++ DL  L G VA+E  G  T+ F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ VAL +GGHT G+AH    PE+                                SG +G WT +P  F   Y   L   E
Sbjct:   67 DLEAVKKDIKTVLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLMVLTGNVALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAKDIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDPTHFTMQYLSNLYKHE 335          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_YERPE (Catalase-peroxidase OS=Yersinia pestis GN=katG PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 72/269 (26.77%), Postives = 104/269 (38.66%), Query Frame = 1
Query:   79 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGE 627
            +++  ++D++ ++          Y N  P  +R+AWH AGTY +    GG + G  R E   S   N  L  A      +K K+  KI++ DL  L G VA+E  G  T+ F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ VAL +GGHT G+AH    PE+                                SG +G WT +P  F   Y   L   E
Sbjct:   67 DLEAVKKDIKTVLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLMVLTGNVALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAKDIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDPTHFTMQYLSNLYKHE 335          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_YERPB (Catalase-peroxidase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=katG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 72/269 (26.77%), Postives = 104/269 (38.66%), Query Frame = 1
Query:   79 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGE 627
            +++  ++D++ ++          Y N  P  +R+AWH AGTY +    GG + G  R E   S   N  L  A      +K K+  KI++ DL  L G VA+E  G  T+ F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ VAL +GGHT G+AH    PE+                                SG +G WT +P  F   Y   L   E
Sbjct:   67 DLEAVKKDIKTVLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLMVLTGNVALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAKDIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDPTHFTMQYLSNLYKHE 335          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_YERPA (Catalase-peroxidase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=katG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 72/269 (26.77%), Postives = 104/269 (38.66%), Query Frame = 1
Query:   79 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGE 627
            +++  ++D++ ++          Y N  P  +R+AWH AGTY +    GG + G  R E   S   N  L  A      +K K+  KI++ DL  L G VA+E  G  T+ F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ VAL +GGHT G+AH    PE+                                SG +G WT +P  F   Y   L   E
Sbjct:   67 DLEAVKKDIKTVLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLMVLTGNVALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAKDIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDPTHFTMQYLSNLYKHE 335          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_YERP3 (Catalase-peroxidase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=katG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 72/269 (26.77%), Postives = 104/269 (38.66%), Query Frame = 1
Query:   79 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGE 627
            +++  ++D++ ++          Y N  P  +R+AWH AGTY +    GG + G  R E   S   N  L  A      +K K+  KI++ DL  L G VA+E  G  T+ F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ VAL +GGHT G+AH    PE+                                SG +G WT +P  F   Y   L   E
Sbjct:   67 DLEAVKKDIKTVLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLMVLTGNVALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAKDIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDPTHFTMQYLSNLYKHE 335          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_YERPY (Catalase-peroxidase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=katG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.534e-14
Identity = 71/269 (26.39%), Postives = 104/269 (38.66%), Query Frame = 1
Query:   79 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGE 627
            +++  ++D++ ++          Y N  P  +R+AWH AGTY +    GG + G  R E   S   N  L  A      +K K+  KI++ DL  L G +A+E  G  T+ F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ VAL +GGHT G+AH    PE+                                SG +G WT +P  F   Y   L   E
Sbjct:   67 DLEAVKKDIKTVLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLMVLTGNIALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAKDIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDPTHFTMQYLSNLYKHE 335          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_THELT (Catalase-peroxidase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=katG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13
Identity = 78/283 (27.56%), Postives = 113/283 (39.93%), Query Frame = 1
Query:   61 DTEYLKEI-----DKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGG-PNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD------------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH---PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGESE 633
            D +YLKE+     D    DL+ L+          + +  P+ +RL+WH AG+Y ++   GG  NGSIR     +   N  L  A+     +K K+  K+++ADL  LAG VA++  G   + F  GR+D                   K   KEG L                      PD    A  +R  F RMG++D++ VAL +GGH+ G+ H   P +                                SGF+  W+ +P KF   Y   LL  E E
Sbjct:   39 DYDYLKEVKTLDVDAVIEDLKKLMKTSQDWWPADFGHYGPLFIRLSWHSAGSYRIHDGRGGAKNGSIRFPARINWPDNINLDKAIRLLWPIKKKYGKKLSWADLIILAGTVALQDMGVKILGFSLGREDVFEADESPDWGAEQEMLSGKERFKEGELEKPFAATEMGLIYVNPEGPMGNPDPSGSAKEIRLAFTRMGMNDEETVALIAGGHSFGKCHGAGPSKDLGPDPSSSPIEQMGLGWKYTYKTGKASDTYTSGFEVIWSSKPTKFGIQYLKFLLEFEWE 321          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_SPHAL (Catalase-peroxidase OS=Sphingopyxis alaskensis GN=katG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13
Identity = 85/334 (25.45%), Postives = 123/334 (36.83%), Query Frame = 1
Query:  100 DLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKHP-KITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------------SKISPKEGRL-----------------PDAKRGAPH--------LRDIFYRMGLSDKDIVALS-GGHTLGRAHPE------------------------------------RSGFDGPWTREPLKFDNSYFVEL-------------------LNGESEGL--------LQLPT-----DKALLEDPEFRRYVELYAKDED 720
            DL+AL+          Y +  P  +R+AWH AGTY      GG N G  R     S   N  L  A      +K K+  KI++ADL+ LAG VA+E  GGP   F  GR D                      ++I P +G                   P+  +G PH        +++ F RM ++D++ VAL+ GGHT G+AH                                       SG +G WT  P ++  +YF  L                   +N + E +        +++PT     D AL  DP +R   E +  D +
Sbjct:   70 DLKALMTDSQPWWPADYGHYGPFFIRMAWHAAGTYRTADGRGGANSGQQRFAPLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAGNVAIESMGGPVFGFGGGRVDVYEPERDIYWGSEDKWVNQGVQTRIDPAKGMETIEGPLAAIQMGLIYVNPEGPQGNPHDDEGMARDMKETFKRMAMNDEETVALTAGGHTFGKAHGNGDPSLLGPAPAGSDLAAQGFGWVSSHESGGIGEHAVTSGIEGAWTNTPREWTENYFRLLFDYDYELVKSPAGAWQWQPINQKEEDMAPAAWDPGIKVPTMMTTADMALKRDPAYRAISERFRNDHE 403          
The following BLAST results are available for this feature:
BLAST of CN186398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
KATG_YERPP6.534e-1426.77Catalase-peroxidase OS=Yersinia pestis (strain Pes... [more]
KATG_YERPN6.534e-1426.77Catalase-peroxidase OS=Yersinia pestis bv. Antiqua... [more]
KATG_YERPG6.534e-1426.77Catalase-peroxidase OS=Yersinia pestis bv. Antiqua... [more]
KATG_YERPE6.534e-1426.77Catalase-peroxidase OS=Yersinia pestis GN=katG PE=... [more]
KATG_YERPB6.534e-1426.77Catalase-peroxidase OS=Yersinia pseudotuberculosis... [more]
KATG_YERPA6.534e-1426.77Catalase-peroxidase OS=Yersinia pestis bv. Antiqua... [more]
KATG_YERP36.534e-1426.77Catalase-peroxidase OS=Yersinia pseudotuberculosis... [more]
KATG_YERPY8.534e-1426.39Catalase-peroxidase OS=Yersinia pseudotuberculosis... [more]
KATG_THELT1.115e-1327.56Catalase-peroxidase OS=Thermotoga lettingae (strai... [more]
KATG_SPHAL1.901e-1325.45Catalase-peroxidase OS=Sphingopyxis alaskensis GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186398 ID=CN186398; Name=CN186398; organism=Citrus sinensis; type=EST; length=720bp
GAGGGTAAACTGTCAAAAGGTCGTTACAGAAAAAGAGCTCCGATGGCTTT
ACCGGTCGTTGACACAGAGTACCTGAAGGAGATCGACAAGGCTCGTCGCG
ATCTCCGCGCTCTTATCGCTTACAAGAACTGTGCTCCAATCATGCTCCGT
CTAGCGTGGCACGACGCGGGAACATATGACGTGAACACGAAGACTGGTGG
ACCAAATGGCTCGATAAGGAACGAAGAGGAGTACTCTCATGGCTCCAACA
ATGGCTTGAAAATCGCTCTTGATTTTTGTGAGGAAGTGAAGGCTAAACAT
CCAAAAATAACATATGCAGACCTATACCAGCTTGCGGGTGTTGTTGCAGT
TGAGGTCACTGGAGGTCCTACAGTCGACTTTGTTCCTGGTAGAAAGGATT
CAAAAATTTCTCCCAAGGAAGGGCGTCTTCCAGATGCCAAACGAGGTGCA
CCTCATCTGAGGGATATCTTTTATCGGATGGGTCTGTCTGACAAGGATAT
AGTGGCACTCTCAGGGGGCCATACTTTGGGAAGGGCACATCCAGAGAGAT
CAGGTTTTGACGGCCCTTGGACCAGGGAGCCTCTGAAATTTGATAACTCA
TACTTTGTGGAGTTGCTGAATGGGGAATCAGAAGGATTACTGCAACTTCC
AACAGACAAGGCTTTATTAGAAGACCCTGAGTTCCGTCGTTATGTTGAGT
TGTATGCAAAGGATGAGGAT
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