CN186398

Overview
NameCN186398
Unique NameCN186398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12355 contig Csv1_Contig12355:28..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_FRATW (Catalase-peroxidase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=katG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13
Identity = 66/215 (30.70%), Postives = 94/215 (43.72%), Query Frame = 1
Query:   46 ALPVVDTEYLKEIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDS--------KISPKE--------GRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 540
            A   +DTE LK      +D++ L+          + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          +SP+E        G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H
Sbjct:   62 AFKKLDTEQLK------KDMQDLLTQSQDWWPADFGNYGPFFIRLSWHDAGTYRIYDGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGLSPEEIMSSNVRDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTH 270          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_FRATT (Catalase-peroxidase OS=Francisella tularensis subsp. tularensis GN=katG PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13
Identity = 66/215 (30.70%), Postives = 94/215 (43.72%), Query Frame = 1
Query:   46 ALPVVDTEYLKEIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDS--------KISPKE--------GRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 540
            A   +DTE LK      +D++ L+          + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          +SP+E        G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H
Sbjct:   62 AFKKLDTEQLK------KDMQDLLTQSQDWWPADFGNYGPFFIRLSWHDAGTYRIYDGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGLSPEEIMSSNVRDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTH 270          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_FRATO (Catalase-peroxidase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=katG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13
Identity = 66/215 (30.70%), Postives = 94/215 (43.72%), Query Frame = 1
Query:   46 ALPVVDTEYLKEIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDS--------KISPKE--------GRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 540
            A   +DTE LK      +D++ L+          + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          +SP+E        G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H
Sbjct:   62 AFKKLDTEQLK------KDMQDLLTQSQDWWPADFGNYGPFFIRLSWHDAGTYRIYDGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGLSPEEIMSSNVRDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTH 270          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_FRATM (Catalase-peroxidase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=katG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13
Identity = 66/215 (30.70%), Postives = 94/215 (43.72%), Query Frame = 1
Query:   46 ALPVVDTEYLKEIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDS--------KISPKE--------GRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 540
            A   +DTE LK      +D++ L+          + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          +SP+E        G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H
Sbjct:   62 AFKKLDTEQLK------KDMQDLLTQSQDWWPADFGNYGPFFIRLSWHDAGTYRIYDGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGLSPEEIMSSNVRDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTH 270          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_FRATH (Catalase-peroxidase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=katG PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13
Identity = 66/215 (30.70%), Postives = 94/215 (43.72%), Query Frame = 1
Query:   46 ALPVVDTEYLKEIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDS--------KISPKE--------GRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 540
            A   +DTE LK      +D++ L+          + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          +SP+E        G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H
Sbjct:   62 AFKKLDTEQLK------KDMQDLLTQSQDWWPADFGNYGPFFIRLSWHDAGTYRIYDGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGLSPEEIMSSNVRDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTH 270          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_FRATF (Catalase-peroxidase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=katG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13
Identity = 66/215 (30.70%), Postives = 94/215 (43.72%), Query Frame = 1
Query:   46 ALPVVDTEYLKEIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDS--------KISPKE--------GRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 540
            A   +DTE LK      +D++ L+          + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          +SP+E        G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H
Sbjct:   62 AFKKLDTEQLK------KDMQDLLTQSQDWWPADFGNYGPFFIRLSWHDAGTYRIYDGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGLSPEEIMSSNVRDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTH 270          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_FRAT1 (Catalase-peroxidase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=katG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13
Identity = 66/215 (30.70%), Postives = 94/215 (43.72%), Query Frame = 1
Query:   46 ALPVVDTEYLKEIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDS--------KISPKE--------GRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 540
            A   +DTE LK      +D++ L+          + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          +SP+E        G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H
Sbjct:   62 AFKKLDTEQLK------KDMQDLLTQSQDWWPADFGNYGPFFIRLSWHDAGTYRIYDGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGLSPEEIMSSNVRDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTH 270          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_ALTMD (Catalase-peroxidase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=katG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.483e-13
Identity = 77/301 (25.58%), Postives = 116/301 (38.54%), Query Frame = 1
Query:   61 DTEYLK-----EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTY-DVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPER------------------------------------SGFDGPWTREPLKFDNSYFVELLNGE------SEGLLQ-LPTDKAL 666
            D +Y K     ++D+ + D+  L+          + N  P  +RL+WH AGTY  ++ + GG  G +R +   S   N  L  A      +K K+   +++ DL  LAG V +E  G  T  F  GR D                 S    +EG+L                      PD    A ++R  F RM ++D++ VAL +GGHT G+ H                                       SG +G WT+ P K+ + Y   LL  E        G +Q +PTD++L
Sbjct:   91 DFDYAKAFSKLDLDQVKSDINELLTTSQDWWPADFGNYGPFFIRLSWHSAGTYRTLDGRGGGDGGQMRFDPLNSWPDNGNLDKARRLLWPIKQKYGESLSWGDLMILAGTVGMENMGFDTYGFAGGRTDDWEPDMVYWGPEVEMLASDREEREGKLQRPLGATHMGLIYVNPEGPKGVPDPMGSAKNIRTAFARMAMNDEETVALIAGGHTFGKMHGAHKPADCLEAEPGGAGLEEQGLGWKNNCGKGNAEDTVTSGLEGAWTQLPTKWTSLYLQNLLGFEWKQTRSPAGAIQWVPTDESL 391          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_FRAP2 (Catalase-peroxidase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 59/181 (32.60%), Postives = 81/181 (44.75%), Query Frame = 1
Query:  121 YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDS--------KISP--------KEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 540
            + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          ISP        K+G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H
Sbjct:   88 FGNYGPFFIRLSWHDAGTYRLADGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGISPEQLMSSNVKDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTH 268          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: KATG_FRATN (Catalase-peroxidase OS=Francisella tularensis subsp. novicida (strain U112) GN=katG PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 58/181 (32.04%), Postives = 81/181 (44.75%), Query Frame = 1
Query:  121 YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDS--------KISPKE--------GRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 540
            + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          +SP+E        G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H
Sbjct:   88 FGNYGPFFIRLSWHDAGTYRIYDGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGLSPEEIMSSNVRDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTH 268          
The following BLAST results are available for this feature:
BLAST of CN186398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
KATG_FRATW1.901e-1330.70Catalase-peroxidase OS=Francisella tularensis subs... [more]
KATG_FRATT1.901e-1330.70Catalase-peroxidase OS=Francisella tularensis subs... [more]
KATG_FRATO1.901e-1330.70Catalase-peroxidase OS=Francisella tularensis subs... [more]
KATG_FRATM1.901e-1330.70Catalase-peroxidase OS=Francisella tularensis subs... [more]
KATG_FRATH1.901e-1330.70Catalase-peroxidase OS=Francisella tularensis subs... [more]
KATG_FRATF1.901e-1330.70Catalase-peroxidase OS=Francisella tularensis subs... [more]
KATG_FRAT11.901e-1330.70Catalase-peroxidase OS=Francisella tularensis subs... [more]
KATG_ALTMD2.483e-1325.58Catalase-peroxidase OS=Alteromonas macleodii (stra... [more]
KATG_FRAP24.236e-1332.60Catalase-peroxidase OS=Francisella philomiragia su... [more]
KATG_FRATN5.532e-1332.04Catalase-peroxidase OS=Francisella tularensis subs... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186398 ID=CN186398; Name=CN186398; organism=Citrus sinensis; type=EST; length=720bp
GAGGGTAAACTGTCAAAAGGTCGTTACAGAAAAAGAGCTCCGATGGCTTT
ACCGGTCGTTGACACAGAGTACCTGAAGGAGATCGACAAGGCTCGTCGCG
ATCTCCGCGCTCTTATCGCTTACAAGAACTGTGCTCCAATCATGCTCCGT
CTAGCGTGGCACGACGCGGGAACATATGACGTGAACACGAAGACTGGTGG
ACCAAATGGCTCGATAAGGAACGAAGAGGAGTACTCTCATGGCTCCAACA
ATGGCTTGAAAATCGCTCTTGATTTTTGTGAGGAAGTGAAGGCTAAACAT
CCAAAAATAACATATGCAGACCTATACCAGCTTGCGGGTGTTGTTGCAGT
TGAGGTCACTGGAGGTCCTACAGTCGACTTTGTTCCTGGTAGAAAGGATT
CAAAAATTTCTCCCAAGGAAGGGCGTCTTCCAGATGCCAAACGAGGTGCA
CCTCATCTGAGGGATATCTTTTATCGGATGGGTCTGTCTGACAAGGATAT
AGTGGCACTCTCAGGGGGCCATACTTTGGGAAGGGCACATCCAGAGAGAT
CAGGTTTTGACGGCCCTTGGACCAGGGAGCCTCTGAAATTTGATAACTCA
TACTTTGTGGAGTTGCTGAATGGGGAATCAGAAGGATTACTGCAACTTCC
AACAGACAAGGCTTTATTAGAAGACCCTGAGTTCCGTCGTTATGTTGAGT
TGTATGCAAAGGATGAGGAT
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