CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ANTFO (ATP-dependent Clp protease proteolytic subunit OS=Anthoceros formosae GN=clpP PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.406e-42 Identity = 84/191 (43.98%), Postives = 128/191 (67.02%), Query Frame = -1 Query: 258 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLID 827 MPIG PKV +R PGE W+D++N LYRER++F+GQ++D+E +NQ++ M+YL+ D+SK +Y+YIN PGG V +++YDTMQ + V T C+G A + F+L GGE R A+P +RI + PA + GQA + EA+E+L++RD I K ++TG+P I++D+ R ++EA YG++D Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDESKDMYLYINSPGGAVLAGISVYDTMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHARIMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISEDMERDVFMSAKEAQIYGIVD 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PANGI (ATP-dependent Clp protease proteolytic subunit OS=Panax ginseng GN=clpP PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.448e-42 Identity = 85/193 (44.04%), Postives = 126/193 (65.28%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N LYRER++F+GQ + E SNQ++ M+YL DD+K +Y+++N PGG V P +AIYDTMQ ++ V T C+G A + F+LAGGE R A P +R+ + PA + Q + EA+ELL++R+ I + +KTG+PF +++DL R + EA YG++D + Sbjct: 1 MPIGVPKVPFRSPGEEDAYWVDIYNRLYRERLLFLGQPVASEISNQLIGLMVYLSIEDDTKDLYLFMNSPGGWVLPGIAIYDTMQFVRPDVHTICMGLAASMGSFILAGGEITKRLAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETITRVYVQKTGKPFWVVSEDLERDVFMSATEAQAYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_NEPOL (ATP-dependent Clp protease proteolytic subunit OS=Nephroselmis olivacea GN=clpP PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.588e-42 Identity = 87/201 (43.28%), Postives = 124/201 (61.69%), Query Frame = -1 Query: 225 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 827 MP+G PKV YR PGE + QWVDL+N LYR+R++F+GQ + +E SNQ+ M+YL + D S ++MYIN PGG VT L ++D + V T CVG A +A +L+GG G R A+P +R+ + P G +RGQA D+ E+ E+ R+RD + +T Q E I DL+R ++A YGLID + P +KE+ Sbjct: 1 MPVGVPKVPYRLPGESAPQWVDLYNRLYRQRLLFMGQELGDELSNQLCGIMIYLFAEDPSIPLFMYINSPGGSVTSGLGVFDIATVMMQDVTTICVGIAASMASLVLSGGSTGQRLALPHARMMIHQPEGGSRGQASDVMYESSEVERLRDIVVDCYVERTHQSRETIIIDLNRDLFMSPRQARSYGLIDAVAL-PAVKEE 200
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_COFAR (ATP-dependent Clp protease proteolytic subunit OS=Coffea arabica GN=clpP PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.588e-42 Identity = 83/193 (43.01%), Postives = 126/193 (65.28%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P +R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+ R + EA YG++D + Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAVDSEISNQLIGLMIYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSATEAQAYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ZYGCR (ATP-dependent Clp protease proteolytic subunit OS=Zygnema circumcarinatum GN=clpP PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.910e-42 Identity = 79/193 (40.93%), Postives = 127/193 (65.80%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R PGE W+D++N LYR+R++F+GQ++D+E +NQ++ M+YL+ + SK +YMYIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P +R+ + PA + GQA + EA+E+L+++D + K ++TG+P I++D+ R ++EA YG++D + Sbjct: 1 MPIGVPKVPFRIPGEEDASWIDVYNRLYRDRLLFLGQDVDDEIANQLIGIMIYLNGENQSKDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEISKRLALPHARVMIHQPASSFYEGQAGECMIEAEEVLKLKDCVTKVYMQRTGKPMAVISEDMERDVFMSAKEAQAYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SPIOL (ATP-dependent Clp protease proteolytic subunit OS=Spinacia oleracea GN=clpP PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.910e-42 Identity = 83/193 (43.01%), Postives = 125/193 (64.77%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P +R+ + PA + Q + EA+ELL++R+ + K ++TG+P +++D+ R + EA +G+ID + Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFLLEAEELLKLRETLTKVYGQRTGKPLWVVSEDMERDVFMSATEAQAHGIIDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_MARPO (ATP-dependent Clp protease proteolytic subunit OS=Marchantia polymorpha GN=clpP PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.690e-41 Identity = 82/193 (42.49%), Postives = 127/193 (65.80%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R PGE W+D++N LYRER++F+GQ +D+E +NQ++ M+YL+ D+SK +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P +R+ + PA + GQA + EA+E+L++RD I K ++TG+P I++D+ R ++EA YG++D + Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDESKDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISEDMERDVFMSAKEAKLYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_EPIVI (ATP-dependent Clp protease proteolytic subunit OS=Epifagus virginiana GN=clpP PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.766e-41 Identity = 82/193 (42.49%), Postives = 125/193 (64.77%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARG-QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV ++ PGE WVD++N LYRER++F+GQ +D + SNQ++ M+YL DD+K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLL GGE R A P +R+ + PA G Q + EA+ELL++R+ + + ++TG+P I++D+ R +++A YG++D + Sbjct: 1 MPIGVPKVPFQIPGEEDASWVDVYNRLYRERLLFLGQEVDSDISNQLIGLMVYLSIEDDTKEIYLFINSPGGWVIPGVAIYDTMQFVRPEVHTICMGLAASMGSFLLVGGEITKRLAFPHARVMIHQPASYFFGAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVISEDMERDVFMSAKDAQAYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_TOBAC (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana tabacum GN=clpP PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.918e-41 Identity = 81/193 (41.97%), Postives = 125/193 (64.77%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P +R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R + EA YG++D + Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSATEAQAYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PHYPA (ATP-dependent Clp protease proteolytic subunit OS=Physcomitrella patens GN=clpP PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.918e-41 Identity = 82/194 (42.27%), Postives = 129/194 (66.49%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWN-ALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R PGE W+D++N LYRER++F+GQ++D+E +NQ++ M+YL+ D++K +Y+YIN PGG V +++YD MQ + V T C+G A + F+LAGGE R A+P +R+ + PA + GQA + EA+E+L++RDYI + ++ G+P I++D+ R +QEA YG++D + Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDENKDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITKRIALPHARVMIHQPASSYYDGQAGECIMEAEEVLKLRDYITRVYVQRIGKPLWVISEDMERDVFMSAQEAKTYGIVDLV 194 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |