CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_NICTO (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana tomentosiformis GN=clpP PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.918e-41 Identity = 81/193 (41.97%), Postives = 125/193 (64.77%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P +R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R + EA YG++D + Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSATEAQAYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_NICSY (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana sylvestris GN=clpP PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.918e-41 Identity = 81/193 (41.97%), Postives = 125/193 (64.77%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P +R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R + EA YG++D + Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSATEAQAYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_LOTJA (ATP-dependent Clp protease proteolytic subunit OS=Lotus japonicus GN=clpP PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.918e-41 Identity = 82/193 (42.49%), Postives = 125/193 (64.77%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N LYRER++F+GQ ++ E SNQ++ M+YL DD K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGG+ R A P +R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R + EA YG++D + Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVNSEISNQLIGLMVYLSIEDDKKDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFVLAGGKITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWLVSEDMERDVFMSAAEAQAYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_LOBMA (ATP-dependent Clp protease proteolytic subunit OS=Lobularia maritima GN=clpP PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.918e-41 Identity = 82/193 (42.49%), Postives = 125/193 (64.77%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GGE R A P +R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CAPBU (ATP-dependent Clp protease proteolytic subunit OS=Capsella bursa-pastoris GN=clpP PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.918e-41 Identity = 82/193 (42.49%), Postives = 125/193 (64.77%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GGE R A P +R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP1_ARATH (ATP-dependent Clp protease proteolytic subunit 1 OS=Arabidopsis thaliana GN=clpP1 PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 4.918e-41 Identity = 83/193 (43.01%), Postives = 124/193 (64.25%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P +R+ + PA + Q + EA+ELL++R+ I + ++TG+P I++D+ R + EA YG++D + Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEAQAYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SOYBN (ATP-dependent Clp protease proteolytic subunit OS=Glycine max GN=clpP PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.424e-41 Identity = 82/193 (42.49%), Postives = 127/193 (65.80%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG P+V +R+PGE WVD++N LYRER++F+GQ +D E SNQ+++ M+YL +++K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGGE R A P +R+ + PA + Q + EA+ELL++R+ I + ++TG+P I++D+ R + EA +G++D + Sbjct: 1 MPIGVPRVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLISLMVYLSIEEENKDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFLLAGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKMRETITRVYVQRTGKPLWVISEDMERDVFMSAAEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PSINU (ATP-dependent Clp protease proteolytic subunit OS=Psilotum nudum GN=clpP PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.424e-41 Identity = 81/193 (41.97%), Postives = 127/193 (65.80%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R PGE WVD++N LYRER++F+GQ +D+E +NQ++ M+YL+ D+++ +Y YIN PGG V P +++YD MQ + V T C+G A + F+L GGE R A+P +R+ + PA + GQA + EA+E+L++RD I + +++T +P I++D+ R ++EA YG++D I Sbjct: 1 MPIGVPKVPFRLPGEEDAGWVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDENRDMYSYINSPGGAVLPGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHARVMIHQPASSYYDGQAGECIMEAEEILKLRDCITRVYAQRTEKPLWVISEDMERDIFMSAKEARAYGIVDLI 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ATRBE (ATP-dependent Clp protease proteolytic subunit OS=Atropa belladonna GN=clpP PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.424e-41 Identity = 81/193 (41.97%), Postives = 125/193 (64.77%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N LYRER++F+GQ I+ E SNQ++ M+YL D++K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P +R+ + PA G Q + EA+ELL++R+ + + ++TG+P +++D+ + + EA YG++D + Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQGINSEISNQLIGLMVYLSIEDETKELYLFINSPGGWVIPGIAIYDTMQFVRPDVHTVCMGLAASMGSFILVGGEITKRLAFPHARVMMHQPASGYYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMEKDVFMSATEAQAYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_VITVI (ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=clpP PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.096e-40 Identity = 82/193 (42.49%), Postives = 122/193 (63.21%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R PGE W+D++N LYRER++F+GQ ++ E SNQ++ M+YL D++K +Y +IN PGG V P +AIYDTMQ + V T C+G A + F+L GG R A P +R+ + PA A QA + EA+ELL++R+ I K ++TG+P +++DL R + EA +G++D + Sbjct: 1 MPIGVPKVPFRNPGEDDISWIDVYNRLYRERLLFLGQEVESEISNQLIGLMIYLSIEDENKDLYFFINSPGGWVLPGIAIYDTMQFVPPEVHTICLGLAASMGSFILVGGTITKRLAFPHARVMIHQPAAAFYEAQAGEFVMEAEELLKLREIITKVYVQRTGKPLWVVSEDLERDVFMSATEAQTHGIVDLV 193 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |