CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_POPAL (ATP-dependent Clp protease proteolytic subunit OS=Populus alba GN=clpP PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.102e-40 Identity = 79/193 (40.93%), Postives = 125/193 (64.77%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R PGE S W+D++N LYRER++F+GQ+ID E SNQ++ M+YL + + K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P +R+ + P A Q + EA+ELL++R+ + + +++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRNPGEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHARVMIHQPFAAFYEAQIGEFVLEAEELLKLREILTRVYAQRTGKPLWVVSEDMERDVFMSAAEAQVHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PELTS (ATP-dependent Clp protease proteolytic subunit OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=clpP PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.102e-40 Identity = 81/171 (47.37%), Postives = 114/171 (66.67%), Query Frame = -1 Query: 252 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 764 D+++ L ++R+IF+G ID+ +N I+A ML+L++ D K + YIN PGG VT +AIYDTMQ ++SPV T C+G A +A LLA G KG R ++P +RI + P G +GQA DI A E+LR+R ++ + LSR TGQP EKI +D R +QEA EYG+ID + Sbjct: 19 DIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQFYINSPGGVVTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARILIHQPLGGVQGQATDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEAKEYGIIDEV 189
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PINCO (ATP-dependent Clp protease proteolytic subunit OS=Pinus contorta GN=clpP PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.276e-40 Identity = 81/199 (40.70%), Postives = 122/199 (61.31%), Query Frame = -1 Query: 234 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 827 MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +K ++ +IN PGG V P + +Y MQ++ V T C+G A + F+L GGE R A+P +R+ + PA + G A D NE+ + VR+YI + +TGQP E I +DL+R + EA YG++D + P I Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDANKEIFSFINCPGGSVIPGVGLYRMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPHARVMIHQPASSYYDGSAADFHNESKHVTLVREYITECYIERTGQPEEVIQRDLNRDVFMSATEAQAYGIVDVVAEDPLI 199
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_NANDO (ATP-dependent Clp protease proteolytic subunit OS=Nandina domestica GN=clpP PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.276e-40 Identity = 80/193 (41.45%), Postives = 123/193 (63.73%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P +R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_HELAN (ATP-dependent Clp protease proteolytic subunit OS=Helianthus annuus GN=clpP PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.276e-40 Identity = 79/193 (40.93%), Postives = 124/193 (64.25%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD++ +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + F+L GGE R A P +R+ + PAG+ + + E ELL++R+ + + ++TG+P +++D+ R + EA YG++D + Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDTQDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPHARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRTGKPVWVVSEDMERDVFMSATEAQAYGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_DRANE (ATP-dependent Clp protease proteolytic subunit OS=Draba nemorosa GN=clpP PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.276e-40 Identity = 80/193 (41.45%), Postives = 123/193 (63.73%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P +R+ + PA + Q + EA+EL+++R+ I + ++TG+P +++D+ R + EA +G +D + Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELIKIRETITRVYVQRTGKPIWVVSEDMKRDVFMSATEAQAHGNVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ACTPJ (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=clpP PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.276e-40 Identity = 81/196 (41.33%), Postives = 129/196 (65.82%), Query Frame = -1 Query: 249 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 836 +A++PI + + GE S+ D+++ L +ER+IF+ +++ +N I+A ML+L++ D K +Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +GQPFEK+ D R + EA+EYGLID+++ Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ACTP2 (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=clpP PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.276e-40 Identity = 81/196 (41.33%), Postives = 129/196 (65.82%), Query Frame = -1 Query: 249 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 836 +A++PI + + GE S+ D+++ L +ER+IF+ +++ +N I+A ML+L++ D K +Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +GQPFEK+ D R + EA+EYGLID+++ Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNPX (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain WH8102) GN=clpP2 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.276e-40 Identity = 81/172 (47.09%), Postives = 116/172 (67.44%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YIN PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI + P G ARGQA DIR +ADE+L +++ + +ELS +TGQP ++I +D R EA+EYGLID +I Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILYLKERLNQELSDRTGQPLDRIQQDTDRDFFMSPGEAVEYGLIDSVI 188
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_BUXMI (ATP-dependent Clp protease proteolytic subunit OS=Buxus microphylla GN=clpP PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.211e-39 Identity = 80/193 (41.45%), Postives = 122/193 (63.21%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+K +Y++IN PGG V P +AIYDTMQ + + T C+G A + FLL GGE R A P +R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGIAIYDTMQFVPPDIHTICMGLAASMGSFLLVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETVTRVYVQRTGNPLWVVSEDMERDVFMSAIEAQAHGIVDLV 193 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |