CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ARAHI (ATP-dependent Clp protease proteolytic subunit OS=Arabis hirsuta GN=clpP PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.525e-39 Identity = 80/193 (41.45%), Postives = 123/193 (63.73%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T +G A +A F+L GG R A P +R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTIGMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKIRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_NYMAL (ATP-dependent Clp protease proteolytic subunit OS=Nymphaea alba GN=clpP PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39 Identity = 78/193 (40.41%), Postives = 124/193 (64.25%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D+++ +Y++IN PGG V P +AIYD MQ + V T C+G A + F+L GGE R A P +R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNTRDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLREILTRVYVQRTGKPLWVVSEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_NUPAD (ATP-dependent Clp protease proteolytic subunit OS=Nuphar advena GN=clpP PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39 Identity = 78/193 (40.41%), Postives = 124/193 (64.25%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D+++ +Y++IN PGG V P +AIYD MQ + V T C+G A + F+L GGE R A P +R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNTRDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLREILTRVYVQRTGKPLWVVSEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CARHZ (ATP-dependent Clp protease proteolytic subunit OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=clpP PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39 Identity = 85/189 (44.97%), Postives = 122/189 (64.55%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+W+ L ++R IFIG ID+ +N ++A ML+L++ D K +++YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA G KG R ++P +RI + P G +GQA DI A E+LR+RD + + L++ TGQP EKI +D R + EA EYG+ID +I Sbjct: 6 PIVIEQTSRGERSY---DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIIDEVI 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_MORIN (ATP-dependent Clp protease proteolytic subunit OS=Morus indica GN=clpP PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.012e-39 Identity = 81/193 (41.97%), Postives = 122/193 (63.21%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PG+ WVD+ N LYRER++F+GQ +D E SNQ++ M++L DD+K +Y++IN PGG V P L IYDTMQ ++ V T C+G A + F+L GGE R A P +R+ + PA + Q + EA+ELL++R+ I + ++TG+ I++D+ R + EA +GL+D + Sbjct: 1 MPIGVPKVPFRSPGDEDASWVDVINRLYRERLLFLGQEVDSEISNQLIGLMVFLSIEDDTKDLYLFINSPGGWVIPGLGIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKSLWVISEDMERDVFMSATEAQAHGLVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CALFG (ATP-dependent Clp protease proteolytic subunit OS=Calycanthus floridus var. glaucus GN=clpP PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.012e-39 Identity = 79/193 (40.93%), Postives = 122/193 (63.21%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P +R+ + PA + + EA+ELL++R+ + + ++TG P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLTIEDDTKDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.012e-39 Identity = 78/172 (45.35%), Postives = 114/172 (66.28%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L R+R+IF+G +D++ +N I+A MLYL+S D K +Y+YIN PGG V +AIYDTMQ ++ V T C+G A + FLLAGG KG R A+P +RI + P G A+G A DI +A E+L +++ + L+ TGQP E+I +D R ++A EYGLID++I Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.012e-39 Identity = 78/172 (45.35%), Postives = 114/172 (66.28%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L R+R+IF+G +D++ +N I+A MLYL+S D K +Y+YIN PGG V +AIYDTMQ ++ V T C+G A + FLLAGG KG R A+P +RI + P G A+G A DI +A E+L +++ + L+ TGQP E+I +D R ++A EYGLID++I Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PINTH (ATP-dependent Clp protease proteolytic subunit OS=Pinus thunbergii GN=clpP PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.852e-39 Identity = 79/191 (41.36%), Postives = 119/191 (62.30%), Query Frame = -1 Query: 258 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLID 827 MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P +RI + PA + G A D NE+ + +RDYI + +T QP E I +DL+R + EA YG++D Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSNKDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPHARIMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTDQPGEVIQRDLNRDVFMSATEAQAYGIVD 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CITSI (ATP-dependent Clp protease proteolytic subunit OS=Citrus sinensis GN=clpP PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.026e-38 Identity = 78/193 (40.41%), Postives = 123/193 (63.73%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARG-QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV YR+PG+ WVD++N LYRER++F+GQ ++ + SNQ++ M+YL +++K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLA G R A P +R+ + P GA G Q + + +ELLR+R+ + +++G+P +++D+ R + EA +GL+D + Sbjct: 1 MPIGVPKVPYRSPGDKHPSWVDIYNRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHARVMIHQPIGAFYGAQTGEFILDTEELLRLREILTMVYVQRSGKPLWVVSEDMERDTFMSATEAQAHGLVDLV 193 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |