CN186183
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186183 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13 Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = -1 Query: 268 DWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 528 D KE P A+ F D+PGL + R+L ISGER +E+ E + K+ R+ER GKF+R+F LPDNA ++++ A +GVLTVT Sbjct: 56 DVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRREERE-DAKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVT 141
BLAST of CN186183 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13 Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = -1 Query: 268 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 579 N PS A R+ A D E P A+VF D+PG++ +L +SG+R ++ +E K+ R+ER GKF+R+F+LPDNA +E++ A+ +GVL VT Sbjct: 30 NNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVT 136
BLAST of CN186183 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = -1 Query: 268 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQI--------------SGERSKEQEEKND--KWHRVERSSGK---FLRRFRLPDNAKVEQVKASMENGVLTVT 543 A +DW+ETP AHVF+ DLPGL +G IL++ +G+ S E+EE+ND +WH ER++G+ + +FRLP++A ++ A M +GVLTVT Sbjct: 25 ARPPMDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGVLTVT 135
BLAST of CN186183 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12 Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = -1 Query: 271 FDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGER-----SKEQE-EKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 609 F G L P S A A +DW ETP +HV + ++PGL +G +L + G KE+E EK+ WH ER +F R LP +VEQ++AS++NGVLTV Sbjct: 6 FGGPFRRILYGRPFPPDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTV 124
BLAST of CN186183 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 39/107 (36.45%), Postives = 59/107 (55.14%), Query Frame = -1 Query: 268 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 579 N PS R+ A D E P A+ F D+PG++ +L +SGER +E +E K+ R+ER GKF+R+F+LP+NA ++++ A +GVL VT Sbjct: 29 NNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVT 135 The following BLAST results are available for this feature:
BLAST of CN186183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186183 ID=CN186183; Name=CN186183; organism=Citrus sinensis; type=EST; length=720bpback to top |