EY665459

Overview
NameEY665459
Unique NameEY665459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.849e-66
Identity = 115/146 (78.77%), Postives = 126/146 (86.30%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK  +RFT +GA+IPKGVLLVGPPGTGKTLLAKA+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF++AK NAPCIVF+DEIDAV           NDEREQTLNQLLTEMDGFEGNTGII++AATNR D+LDSAL+R   F
Sbjct:  177 VDFLKNADRFTELGAKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRF 322          

HSP 2 Score: 45.0542 bits (105), Expect = 2.849e-66
Identity = 28/65 (43.08%), Postives = 34/65 (52.31%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQV VD PD  G+ R+I       K   +  V L     +TPGF  AD + L  +A I A
Sbjct:  319 PGRFDRQVVVDRPDYAGR-REILNVHARGKTL-SQDVDLDKIARRTPGFTGADLSNLLNEAAILA 381          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 6.887e-65
Identity = 115/146 (78.77%), Postives = 121/146 (82.88%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK   +FT VGA IPKGVLLVGPPGTGKTLLAKAIAGEA  PFFSISGSEFVEMFVGVGASRVRDLFKKAKE APCIVF+DEIDAV           NDEREQTLNQLLTEMDGF G+TG+IV+AATNR D+LDSALLR   F
Sbjct:  187 VAFLKDSRKFTNVGATIPKGVLLVGPPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRF 332          

HSP 2 Score: 46.2098 bits (108), Expect = 6.887e-65
Identity = 28/70 (40.00%), Postives = 36/70 (51.43%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDRQ+ V +P+I G+   +K    S KK     V L     +TPGF  AD A L  +A I     G+
Sbjct:  329 PGRFDRQIMVSLPNINGRLAILK--VHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGK 396          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.977e-65
Identity = 108/146 (73.97%), Postives = 124/146 (84.93%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK+P+++T VGA+IPKG+LLVGPPGTGKTLLAKAIA EA VPFFS++GSEFVEMF+G+GA+RVRDLFKKA ENAPCIVF+DEIDAV           NDEREQTLNQLLTEMDGF+ N G+IV+ ATNRADILD+ALLR   F
Sbjct:  202 VSFLKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLRPGRF 347          

HSP 2 Score: 48.9062 bits (115), Expect = 8.977e-65
Identity = 29/65 (44.62%), Postives = 37/65 (56.92%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQVTV++PD  G+   +K    +  K     VSL+    +TPGF  AD A L  +A I A
Sbjct:  344 PGRFDRQVTVNLPDRLGRVGILK--VHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAAILA 406          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.413e-64
Identity = 110/146 (75.34%), Postives = 120/146 (82.19%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK P +F  +GARIPKGVLLVGPPGTGKTLLAKA AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAPC++F+DEIDAV           +DEREQTLNQLL EMDGF  N GII+IAATNRADILD ALLR   F
Sbjct:  177 VEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRF 322          

HSP 2 Score: 49.2914 bits (116), Expect = 4.413e-64
Identity = 28/71 (39.44%), Postives = 38/71 (53.52%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQ 647
            PGRFDRQ+TVD PD+ G+   +K     NK  D   V+L     +TPGF  AD   L  +A + A    ++
Sbjct:  319 PGRFDRQITVDRPDVIGREAVLK-VHARNKPLDET-VNLKSIAMRTPGFSGADLENLLNEAALVAARQNKK 387          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 5.752e-64
Identity = 111/146 (76.03%), Postives = 123/146 (84.25%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK P +F+A+GARIPKGVLLVGPPGTGKTLLA+A+AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAPCI+F+DEIDAV           +DEREQTLNQLL EMDGF  N GII+IAATNRADILD ALLR   F
Sbjct:  182 VEFLKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRF 327          

HSP 2 Score: 44.669 bits (104), Expect = 5.752e-64
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQ+ V+ PD+ G+  ++ +    NK  + + V+L     +TPGF  AD   L  +A + A
Sbjct:  324 PGRFDRQIQVNRPDVNGR-EEVLKVHARNKPLN-DDVNLKTIATRTPGFSGADLENLLNEAALVA 386          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.749e-64
Identity = 137/214 (64.02%), Postives = 155/214 (72.43%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF**TGYC*CS*HSRKEQRY*KVHG*QQKI*CKWCLLDGKARTNPWVPGC*LCNPQRTGRHLCVRRRAAS 649
            V FLK+PERFTAVGA+IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC++F+DEIDAV           NDEREQTLNQLLTEMDGFEGNTGII+IAATNR D+LDSAL+R   F          +S +++   +VH   +K+      +D  AR  P   G  L N       L  RRR ++
Sbjct:  188 VTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEIL-EVHARNKKL-APEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSA 399          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 7.498e-64
Identity = 107/146 (73.29%), Postives = 123/146 (84.25%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK P+++TA+GA+IPKG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK  APCIVF+DEIDAV           NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLR   F
Sbjct:  266 VDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRF 411          

HSP 2 Score: 48.1358 bits (113), Expect = 7.498e-64
Identity = 28/65 (43.08%), Postives = 34/65 (52.31%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQVTVD PD+ G+ + +K    S  K     V       +TPGF  AD   L  +A I A
Sbjct:  408 PGRFDRQVTVDRPDVAGRVQILK--VHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILA 470          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 2.167e-63
Identity = 107/146 (73.29%), Postives = 123/146 (84.25%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK P+++TA+GA+IPKG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK  APCIVF+DEIDAV           NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLR   F
Sbjct:  278 VDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRF 423          

HSP 2 Score: 46.595 bits (109), Expect = 2.167e-63
Identity = 27/65 (41.54%), Postives = 34/65 (52.31%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQVTVD PD+ G+ + ++    S  K     V       +TPGF  AD   L  +A I A
Sbjct:  420 PGRFDRQVTVDRPDVAGRVKILQ--VHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILA 482          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.827e-63
Identity = 106/146 (72.60%), Postives = 123/146 (84.25%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK P+++TA+GA+IPKG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK  APCIVF+DEIDAV           NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LD+ALLR   F
Sbjct:  248 VDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRF 393          

HSP 2 Score: 48.1358 bits (113), Expect = 2.827e-63
Identity = 28/65 (43.08%), Postives = 35/65 (53.85%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQVTVD PD+ G+ + ++    S  K  A  V       +TPGF  AD   L  +A I A
Sbjct:  390 PGRFDRQVTVDRPDVAGRVKILE--VHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILA 452          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 4.805e-63
Identity = 107/146 (73.29%), Postives = 123/146 (84.25%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK P+++TA+GA+IPKG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK  APCIVF+DEIDAV           NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLR   F
Sbjct:  269 VDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRF 414          

HSP 2 Score: 45.4394 bits (106), Expect = 4.805e-63
Identity = 26/65 (40.00%), Postives = 34/65 (52.31%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQVTVD PD+ G+ + ++    S  K     V       +TPG+  AD   L  +A I A
Sbjct:  411 PGRFDRQVTVDRPDVAGRIKILQ--VHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILA 473          
The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
FTSH4_SYNY32.849e-6678.77Cell division protease ftsH homolog 4 OS=Synechocy... [more]
FTSH_CYACA6.887e-6578.77Cell division protease ftsH homolog OS=Cyanidium c... [more]
FTSH_ODOSI8.977e-6573.97Cell division protease ftsH homolog OS=Odontella s... [more]
FTSH_BACSU4.413e-6475.34Cell division protease ftsH homolog OS=Bacillus su... [more]
FTSH_BACPF5.752e-6476.03Cell division protease ftsH homolog OS=Bacillus ps... [more]
FTSH1_SYNY36.749e-6464.02Cell division protease ftsH homolog 1 OS=Synechocy... [more]
FTSH5_ARATH7.498e-6473.29Cell division protease ftsH homolog 5, chloroplast... [more]
FTSH1_ARATH2.167e-6373.29Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH1_ORYSJ2.827e-6372.60Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH_TOBAC4.805e-6373.29Cell division protease ftsH homolog, chloroplastic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC
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