EY665459

Overview
NameEY665459
Unique NameEY665459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.351e-58
Identity = 103/144 (71.53%), Postives = 119/144 (82.64%), Query Frame = 2
Query:   14 FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            FL+ P R+ A+GA+IPKGVLL GPPGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF++AK+N+PCI+FVDEIDAV           +DEREQTLNQLL EMDGF    G+I+IAATNR DILD ALLR   F
Sbjct:  181 FLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRF 324          

HSP 2 Score: 38.891 bits (89), Expect = 7.351e-58
Identity = 24/72 (33.33%), Postives = 35/72 (48.61%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQV 650
            PGRFDRQ+ V  PD+ G+ R + R     K   A+   L G  ++T G   AD A +  +A +    +   V
Sbjct:  321 PGRFDRQIPVSNPDLAGR-RAVLRVHSKGKPMAAD-ADLDGLAKRTVGMTGADLANVINEAALLTARENGTV 390          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 9.601e-58
Identity = 97/146 (66.44%), Postives = 119/146 (81.51%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK P+++T +G +IP+GVLLVGPPGTGKTLLA+A+AGEA VPFF ISGS+F+EMFVG+GASRVRDLFK+A+E AP I+F+DE+DA+           NDEREQTLNQLL EMDGF+  TG+I++AATNR D+LD ALLR   F
Sbjct:  157 VDFLKFPKKYTEIGGKIPRGVLLVGPPGTGKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAI-GKSRLNAIHSNDEREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRF 301          

HSP 2 Score: 47.3654 bits (111), Expect = 9.601e-58
Identity = 30/74 (40.54%), Postives = 37/74 (50.00%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQVAI 656
            PGRFDRQV VD PD++G+   I R    N K  A  V L      T G+  AD A +  +A + A   GR   I
Sbjct:  298 PGRFDRQVCVDRPDLKGREA-ILRIHAQNVKL-APEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVI 369          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.997e-57
Identity = 102/144 (70.83%), Postives = 117/144 (81.25%), Query Frame = 2
Query:   14 FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            FL+ P R+  +GA+IPKGVLL GPPGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF +AK+N+PCI+FVDEIDAV           +DEREQTLNQLL EMDGF    G+I+IAATNR DILD ALLR   F
Sbjct:  181 FLQNPCRYQTLGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRF 324          

HSP 2 Score: 39.2762 bits (90), Expect = 7.997e-57
Identity = 23/63 (36.51%), Postives = 33/63 (52.38%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGI 623
            PGRFDRQ+ V  PD+ G+ R + R     K   A+   L G  ++T G   AD A +  +A +
Sbjct:  321 PGRFDRQIPVSNPDLAGR-RAVLRVHSKGKPI-ADDADLDGLAKRTVGMTGADLANVVNEAAL 381          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 8.005e-57
Identity = 102/147 (69.39%), Postives = 118/147 (80.27%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN-TGIIVIAATNRADILDSALLRAWTF 445
            V FLK P+++  +GARIP GVLL GPPGTGKTLLAKA+AGEAGVPF+SISGS+FVEMFVGVGASRVRDLF+ AK+ AP I+F+DEIDAV           NDEREQTLNQLL EMDGF+ +   +IVIAATNR+D+LD ALLR   F
Sbjct:  209 VDFLKNPKKYHDLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALLRPGRF 355          

HSP 2 Score: 44.669 bits (104), Expect = 8.005e-57
Identity = 24/71 (33.80%), Postives = 37/71 (52.11%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQ 647
            PGRFDR+V V  PD++G+   +K    +  K  A+ V L     QTPG+  AD   +  +A + A    ++
Sbjct:  352 PGRFDRKVLVGAPDVKGREAVLK--VHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKK 420          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH3_SYNY3 (Cell division protease ftsH homolog 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1463 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.044e-56
Identity = 103/148 (69.59%), Postives = 118/148 (79.73%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFE-GNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK P+R+TA+GA+IPKGVLLVGPPGTGKTLLAKA AGEAGVPFF ISGSEFVE+FVG GA+RVRDLF++AK+ APCIVF+DE+DA+            NDEREQTLNQLLTEMDGF      +IV+AATNR + LD ALLR   F
Sbjct:  190 VDFLKFPQRYTALGAKIPKGVLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDPALLRPGRF 337          

HSP 2 Score: 46.2098 bits (108), Expect = 1.044e-56
Identity = 28/65 (43.08%), Postives = 34/65 (52.31%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQV VD PD+ G+ + I        K D   V L     +TPGF  AD A L  +A + A
Sbjct:  334 PGRFDRQVLVDRPDLAGRLK-ILEIYAKKIKLDKE-VELKNIATRTPGFAGADLANLVNEAALLA 396          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.136e-55
Identity = 99/147 (67.35%), Postives = 114/147 (77.55%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            + +LK P +F  +G R PKGVLL G PG GKTLLAKAIAGEA VPF S+SGS+FVEMFVGVGA+RVRDLF+ AK++APCI+F+DEIDAV            +DEREQTLNQLL EMDGF+ + GIIVIAATNR DILD ALLR   F
Sbjct:  171 IEYLKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRF 317          

HSP 2 Score: 49.6766 bits (117), Expect = 1.136e-55
Identity = 28/71 (39.44%), Postives = 38/71 (53.52%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQ 647
            PGRFDRQ+ +  PD+RG+  +I +    NKK  A  V L      TPGF  AD   L  +A + A   G++
Sbjct:  314 PGRFDRQIFIPKPDVRGR-YEILKVHARNKKL-AKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKE 382          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 4.269e-55
Identity = 94/146 (64.38%), Postives = 112/146 (76.71%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK P+++  +GA+IPKG LLVGPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR LF++A++ AP I+F+DEIDA+           NDERE TLNQLL EMDGF    G++V+A TNR DILD ALLR   F
Sbjct:  338 VHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 483          

HSP 2 Score: 46.9802 bits (110), Expect = 4.269e-55
Identity = 24/65 (36.92%), Postives = 34/65 (52.31%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQ+T+D PDI+G+++  K +    K               TPGF  AD A +  +A + A
Sbjct:  480 PGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIA 544          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.050e-54
Identity = 94/147 (63.95%), Postives = 114/147 (77.55%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK P+++  +GA+IPKG LLVGPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A++ AP I+F+DEIDA+            NDERE TLNQLL EMDGF   +G++V+A TNR DILD ALLR   F
Sbjct:  351 VHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRF 497          

HSP 2 Score: 46.595 bits (109), Expect = 6.050e-54
Identity = 23/65 (35.38%), Postives = 35/65 (53.85%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQ+T+D PDI+G+++  + +    K  +            TPGF  AD A +  +A + A
Sbjct:  494 PGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 558          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 2.283e-53
Identity = 99/148 (66.89%), Postives = 115/148 (77.70%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK PER+  +GA+IPKGVLLVGPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+DEIDA+            NDEREQTLNQLL EMDGF   N  +IV+AATNR +ILD AL+R   F
Sbjct:  186 VDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRF 333          

HSP 2 Score: 42.743 bits (99), Expect = 2.283e-53
Identity = 26/65 (40.00%), Postives = 33/65 (50.77%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQV VD PD  G+   +K      K   AN V+L    + T G   AD A +  +A + A
Sbjct:  330 PGRFDRQVLVDKPDFNGRVEILKVHIKGVKL--ANDVNLQEVAKLTAGLAGADLANIINEAALLA 392          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.283e-53
Identity = 99/148 (66.89%), Postives = 115/148 (77.70%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLRAWTF 445
            V FLK PER+  +GA+IPKGVLLVGPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+DEIDA+            NDEREQTLNQLL EMDGF   N  +IV+AATNR +ILD AL+R   F
Sbjct:  186 VDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRF 333          

HSP 2 Score: 42.743 bits (99), Expect = 2.283e-53
Identity = 26/65 (40.00%), Postives = 33/65 (50.77%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDRQV VD PD  G+   +K      K   AN V+L    + T G   AD A +  +A + A
Sbjct:  330 PGRFDRQVLVDKPDFNGRVEILKVHIKGVKL--ANDVNLQEVAKLTAGLAGADLANIINEAALLA 392          
The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
FTSH_MYCBO7.351e-5871.53Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_TREPA9.601e-5866.44Cell division protease ftsH homolog OS=Treponema p... [more]
FTSH_MYCLE7.997e-5770.83Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_LACLA8.005e-5769.39Cell division protease ftsH homolog OS=Lactococcus... [more]
FTSH3_SYNY31.044e-5669.59Cell division protease ftsH homolog 3 OS=Synechocy... [more]
FTSH_AQUAE1.136e-5567.35Cell division protease ftsH homolog OS=Aquifex aeo... [more]
FTSH3_ARATH4.269e-5564.38Cell division protease ftsH homolog 3, mitochondri... [more]
FTSH8_ORYSJ6.050e-5463.95Cell division protease ftsH homolog 8, mitochondri... [more]
FTSH_HELPY2.283e-5366.89Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_HELPJ2.283e-5366.89Cell division protease ftsH homolog OS=Helicobacte... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC
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