EY665459

Overview
NameEY665459
Unique NameEY665459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 7.939e-41
Identity = 80/143 (55.94%), Postives = 95/143 (66.43%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKGVLL GPPGTGKTLLAKA+A E    F  + GSE V+ F+G GA  VRD+FK AKE +PCI+F+DEIDAV           + E ++TL QLL EMDGF+    + +IAATNR DILD A+LR   F
Sbjct:  168 LKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRF 310          

HSP 2 Score: 36.965 bits (84), Expect = 7.939e-41
Identity = 22/71 (30.99%), Postives = 35/71 (49.30%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQ 647
            PGRFDR + + +PD  G+   +K  T   +K +  GV L    +       AD   +  +AG+FA  + R+
Sbjct:  307 PGRFDRIIEISMPDEDGRLEILKIHT---EKMNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREERE 374          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.034e-40
Identity = 80/143 (55.94%), Postives = 95/143 (66.43%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKGVLL GPPGTGKTLLAKA+A E    F  + GSE V+ F+G GA  VRD+FK AKE +PCI+F+DEIDAV           + E ++TL QLL EMDGF+    + +IAATNR DILD A+LR   F
Sbjct:  168 LKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRF 310          

HSP 2 Score: 36.5798 bits (83), Expect = 1.034e-40
Identity = 22/71 (30.99%), Postives = 35/71 (49.30%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQ 647
            PGRFDR + + +PD  G+   +K  T   +K +  GV L    +       AD   +  +AG+FA  + R+
Sbjct:  307 PGRFDRIIEISMPDEDGRLDILKIHT---EKMNLKGVDLREVAKLAENMVGADLKAVCTEAGMFAIREERE 374          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.339e-40
Identity = 77/150 (51.33%), Postives = 100/150 (66.67%), Query Frame = 2
Query:    8 VRFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG----IIVIAATNRADILDSALLRAWTF 445
            V FL+ P  FT +G ++P+GVLL GPPGTGKT+LA+A+AGEA VPFF +SGS+F EM+VGVGA RVR+LF  A++ AP I+F+DE+DA+                QTLNQLL ++DGF  N      ++ I ATN  + LD AL R   F
Sbjct:  283 VDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNARDAA---HMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRF 429          

HSP 2 Score: 40.0466 bits (92), Expect = 1.339e-40
Identity = 23/65 (35.38%), Postives = 35/65 (53.85%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA 629
            PGRFDR + V +PD+RG+   + + T          +S++ +   T GF  AD A L  QA ++A
Sbjct:  426 PGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIAR--GTSGFAGADLANLINQAAVYA 488          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.348e-40
Identity = 80/143 (55.94%), Postives = 95/143 (66.43%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKGVLL GPPGTGKTLLAKA+A E    F  + GSE V+ F+G GA  VRD+FK AKE +PCI+F+DEIDAV           + E ++TL QLL EMDGF+    + +IAATNR DILD A+LR   F
Sbjct:  168 LKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRF 310          

HSP 2 Score: 35.8094 bits (81), Expect = 1.348e-40
Identity = 21/71 (29.58%), Postives = 33/71 (46.48%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQ 647
            PGRFDR + +  PD  G+   ++ F     K +   V L    +       AD   +  +AG+FA  +GR+
Sbjct:  307 PGRFDRIIEIAAPDEDGR---LEIFKIHTDKMNIKSVDLREIAKMAENMVGADIKAVCTEAGMFAIREGRE 374          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.348e-40
Identity = 80/143 (55.94%), Postives = 95/143 (66.43%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKGVLL GPPGTGKTLLAKA+A E    F  + GSE V+ F+G GA  VRD+FK AKE +PCI+F+DEIDAV           + E ++TL QLL EMDGF+    + +IAATNR DILD A+LR   F
Sbjct:  168 LKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRF 310          

HSP 2 Score: 36.1946 bits (82), Expect = 1.348e-40
Identity = 22/71 (30.99%), Postives = 35/71 (49.30%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQ 647
            PGRFDR + + +PD  G+   +K  T   +K +  GV L    +       AD   +  +AG+FA  + R+
Sbjct:  307 PGRFDRIIEISMPDEDGRLDILKIHT---EKMNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREERE 374          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.757e-40
Identity = 76/143 (53.15%), Postives = 88/143 (61.54%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKGVLL GPPG GKTL+AKA+A      F  + GSE V  F+G GA  V +LF+ AKE AP I+F+DEIDA+             E  +TL QLL EMDGF+    + VIAATNR DILD ALLR   F
Sbjct:  158 LKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRF 300          

HSP 2 Score: 46.595 bits (109), Expect = 1.757e-40
Identity = 27/70 (38.57%), Postives = 37/70 (52.86%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +PD +G+   +K  T   +K +  GV L    E T G   AD   +  +AG+FA  D R
Sbjct:  297 PGRFDRLIEVPLPDYQGRLEILKVHT---RKMNLKGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRR 363          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.981e-40
Identity = 80/143 (55.94%), Postives = 95/143 (66.43%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKGVLL GPPGTGKTLLAKA+A E    F  + GSE V+ F+G GA  VRD+FK AKE +PCI+F+DEIDAV           + E ++TL QLL EMDGF+    + +IAATNR DILD A+LR   F
Sbjct:  168 LKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRF 310          

HSP 2 Score: 35.039 bits (79), Expect = 2.981e-40
Identity = 21/71 (29.58%), Postives = 34/71 (47.89%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQ 647
            PGRFDR + + +PD  G+   +K  T   +K +   V L    +       AD   +  +AG+FA  + R+
Sbjct:  307 PGRFDRIIEISMPDEDGRLEILKIHT---EKMNLKNVDLREVAKLAENMVGADLKAVCTEAGMFAIREERE 374          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.885e-40
Identity = 76/143 (53.15%), Postives = 90/143 (62.94%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKGVLL GPPG GKTL+AKA+A E    F  + GSE V  F+G GA  V +LF+ AKE AP I+F+DEIDA+             E  +TL QLL EMDGF+ +  + +IAATNR DILD ALLR   F
Sbjct:  159 LKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRF 301          

HSP 2 Score: 44.2838 bits (103), Expect = 3.885e-40
Identity = 25/71 (35.21%), Postives = 37/71 (52.11%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQ 647
            PGRFDR + V +P+ + +   +K  T   K+ +  GV L    E T G   AD   +  +AG+FA  D R+
Sbjct:  298 PGRFDRLIEVPLPNFKSRLEILKIHT---KRMNLKGVDLRIIAEMTEGASGADLKAITMEAGMFAIRDRRE 365          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.063e-40
Identity = 76/143 (53.15%), Postives = 88/143 (61.54%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKGVLL GPPG GKTL+AKA+A      F  + GSE V  F+G GA  V +LF+ AKE AP I+F+DEIDA+             E  +TL QLL EMDGF+    + VIAATNR DILD ALLR   F
Sbjct:  158 LKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRF 300          

HSP 2 Score: 44.669 bits (104), Expect = 5.063e-40
Identity = 26/70 (37.14%), Postives = 36/70 (51.43%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +PD RG+   +K  T   +K +   V L    + T G   AD   +  +AG+FA  D R
Sbjct:  297 PGRFDRLIEVPLPDFRGRLEILKVHT---RKMNLRNVDLSIIADITEGASGADLKAIATEAGMFAIRDRR 363          
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.594e-40
Identity = 76/143 (53.15%), Postives = 89/143 (62.24%), Query Frame = 2
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKGVLL GPPG GKTL+AKA+A E    F  + GSE V  ++G GA  V +LF+ AKE AP I+F+DEIDA+             E  +TL QLL EMDGF+    + VIAATNR DILD ALLR   F
Sbjct:  160 LKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRF 302          

HSP 2 Score: 45.4394 bits (106), Expect = 8.594e-40
Identity = 25/70 (35.71%), Postives = 35/70 (50.00%), Query Frame = 3
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +PD  G+   +K  T   ++    GV L    E T G   AD   +  +AG+FA  + R
Sbjct:  299 PGRFDRLIEVPLPDFEGRLEILKVHT---RRMKLKGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERR 365          
The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
PSMR_METMP7.939e-4155.94Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM61.034e-4055.94Proteasome-activating nucleotidase OS=Methanococcu... [more]
YME1_SCHPO1.339e-4051.33Protein YME1 homolog OS=Schizosaccharomyces pombe ... [more]
PSMR_METVS1.348e-4055.94Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM51.348e-4055.94Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_PYRKO1.757e-4053.15Proteasome-activating nucleotidase OS=Pyrococcus k... [more]
PSMR_METM72.981e-4055.94Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_THEON3.885e-4053.15Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_THEGJ5.063e-4053.15Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_PYRHO8.594e-4053.15Proteasome-activating nucleotidase OS=Pyrococcus h... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC
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