EY665459

Overview
NameEY665459
Unique NameEY665459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.474e-39
Identity = 77/143 (53.85%), Postives = 94/143 (65.73%), Query Frame = 2 
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKG+LL GPPGTGKTLLAKA+A E    F  + GSE V+ F+G GAS V+D+FK AKE AP I+F+DEIDA+           + E ++TL QLL EMDGF+    + +I ATNR DILD A+LR   F
Sbjct:  190 LKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRF 332

HSP 2 Score: 34.6538 bits (78), Expect = 2.474e-39
Identity = 29/98 (29.59%), Postives = 43/98 (43.88%), Query Frame = 3 
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFA---------CDDGRQVAIVFEKK*PIQVKRNVH 701
            PGRFDR + V  PD +G+   +K  T   K   A  V+L    + T G   A+   +  +AG+ A          DD R+      +K  ++VK   H
Sbjct:  329 PGRFDRIIEVPAPDEKGRLEILKIHT--RKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVKVKEPAH 424
[Close]
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.476e-39
Identity = 77/143 (53.85%), Postives = 89/143 (62.24%), Query Frame = 2 
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  VG   PKGVLL GPPG GKTL+AKAIA E    F  + GSE V  ++G GA  V +LF+ AKE AP I+F+DEIDA+             E  +TL QLL EMDGF+    + VIAATNR DILD ALLR   F
Sbjct:  157 LKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRF 299

HSP 2 Score: 43.1282 bits (100), Expect = 2.476e-39
Identity = 25/70 (35.71%), Postives = 35/70 (50.00%), Query Frame = 3 
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +PD  G+   +K  T   ++    GV L    E T G   AD   +  +AG+FA  + R
Sbjct:  296 PGRFDRLIEVPLPDFEGRLEILKVHT---RRMKLRGVDLRLIAELTEGASGADLKAIATEAGMFAIRERR 362
[Close]
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.227e-39
Identity = 76/143 (53.15%), Postives = 92/143 (64.34%), Query Frame = 2 
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LKKPE F  +G   PKGVLL GPPGTGKT+LAKA+A E+   F  +  SEF + FVG GA  VR+LF+ AK  AP I+F+DEIDA+             E ++TL QLL E+DGF     + +IAATNR DILD ALLR   F
Sbjct:  154 LKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRF 296

HSP 2 Score: 39.6614 bits (91), Expect = 3.227e-39
Identity = 23/70 (32.86%), Postives = 33/70 (47.14%), Query Frame = 3 
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +PD RG+      +    K  D   + L+   + + GF  AD   +  +A   A  DGR
Sbjct:  293 PGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLS--QLSEGFSGADIKNVCVEAAYMAIRDGR 360
[Close]
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.227e-39
Identity = 76/143 (53.15%), Postives = 92/143 (64.34%), Query Frame = 2 
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LKKPE F  +G   PKGVLL GPPGTGKT+LAKA+A E+   F  +  SEF + FVG GA  VR+LF+ AK  AP I+F+DEIDA+             E ++TL QLL E+DGF     + +IAATNR DILD ALLR   F
Sbjct:  154 LKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRF 296

HSP 2 Score: 39.6614 bits (91), Expect = 3.227e-39
Identity = 23/70 (32.86%), Postives = 33/70 (47.14%), Query Frame = 3 
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +PD RG+      +    K  D   + L+   + + GF  AD   +  +A   A  DGR
Sbjct:  293 PGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLS--QLSEGFSGADIKNVCVEAAYMAIRDGR 360
[Close]
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.227e-39
Identity = 76/143 (53.15%), Postives = 92/143 (64.34%), Query Frame = 2 
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LKKPE F  +G   PKGVLL GPPGTGKT+LAKA+A E+   F  +  SEF + FVG GA  VR+LF+ AK  AP I+F+DEIDA+             E ++TL QLL E+DGF     + +IAATNR DILD ALLR   F
Sbjct:  154 LKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRF 296

HSP 2 Score: 39.6614 bits (91), Expect = 3.227e-39
Identity = 23/70 (32.86%), Postives = 33/70 (47.14%), Query Frame = 3 
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +PD RG+      +    K  D   + L+   + + GF  AD   +  +A   A  DGR
Sbjct:  293 PGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLS--QLSEGFSGADIKNVCVEAAYMAIRDGR 360
[Close]
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.227e-39
Identity = 76/143 (53.15%), Postives = 92/143 (64.34%), Query Frame = 2 
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LKKPE F  +G   PKGVLL GPPGTGKT+LAKA+A E+   F  +  SEF + FVG GA  VR+LF+ AK  AP I+F+DEIDA+             E ++TL QLL E+DGF     + +IAATNR DILD ALLR   F
Sbjct:  154 LKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRF 296

HSP 2 Score: 39.6614 bits (91), Expect = 3.227e-39
Identity = 23/70 (32.86%), Postives = 33/70 (47.14%), Query Frame = 3 
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +PD RG+      +    K  D   + L+   + + GF  AD   +  +A   A  DGR
Sbjct:  293 PGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLS--QLSEGFSGADIKNVCVEAAYMAIRDGR 360
[Close]
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.227e-39
Identity = 76/143 (53.15%), Postives = 92/143 (64.34%), Query Frame = 2 
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LKKPE F  +G   PKGVLL GPPGTGKT+LAKA+A E+   F  +  SEF + FVG GA  VR+LF+ AK  AP I+F+DEIDA+             E ++TL QLL E+DGF     + +IAATNR DILD ALLR   F
Sbjct:  154 LKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRF 296

HSP 2 Score: 39.6614 bits (91), Expect = 3.227e-39
Identity = 23/70 (32.86%), Postives = 33/70 (47.14%), Query Frame = 3 
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +PD RG+      +    K  D   + L+   + + GF  AD   +  +A   A  DGR
Sbjct:  293 PGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLS--QLSEGFSGADIKNVCVEAAYMAIRDGR 360
[Close]
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.227e-39
Identity = 76/143 (53.15%), Postives = 92/143 (64.34%), Query Frame = 2 
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LKKPE F  +G   PKGVLL GPPGTGKT+LAKA+A E+   F  +  SEF + FVG GA  VR+LF+ AK  AP I+F+DEIDA+             E ++TL QLL E+DGF     + +IAATNR DILD ALLR   F
Sbjct:  154 LKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRF 296

HSP 2 Score: 39.6614 bits (91), Expect = 3.227e-39
Identity = 23/70 (32.86%), Postives = 33/70 (47.14%), Query Frame = 3 
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +PD RG+      +    K  D   + L+   + + GF  AD   +  +A   A  DGR
Sbjct:  293 PGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLS--QLSEGFSGADIKNVCVEAAYMAIRDGR 360
[Close]
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.227e-39
Identity = 75/143 (52.45%), Postives = 92/143 (64.34%), Query Frame = 2 
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LK PE F  +G   PKGVLL GPPGTGKT+LAKA+A E+   F  +  SEF + FVG GA  VR+LF+ AK  AP I+F+DEIDA+             E ++TL QLL E+DGF+    + +IAATNR DILD ALLR   F
Sbjct:  154 LKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRF 296

HSP 2 Score: 40.817 bits (94), Expect = 3.227e-39
Identity = 29/90 (32.22%), Postives = 40/90 (44.44%), Query Frame = 3 
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGRQVAI---VFEKK*PIQVKRN 695
            PGRFDR + V +PD +G+      +    K  D   + L+   + T GF  AD   +  +A   A  DGR       + E    I VKRN
Sbjct:  293 PGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLS--QLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINVKRN 380
[Close]
BLAST of EY665459 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 4.201e-39
Identity = 77/143 (53.85%), Postives = 93/143 (65.03%), Query Frame = 2 
Query:   17 LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRAWTF 445
            LKKPE F  +G   PKGVLL GPPGTGKTLLAKA+A E    F  I  SEFV  ++G GA  VR +F+ AKE +P I+F+DEIDAV           + E ++TL QLL E+DGFE    + ++AATNR DILD ALLR   F
Sbjct:  171 LKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRF 313

HSP 2 Score: 36.5798 bits (83), Expect = 4.201e-39
Identity = 22/70 (31.43%), Postives = 34/70 (48.57%), Query Frame = 3 
Query:  435 PGRFDRQVTVDVPDIRGKNRDIKRFTGSNKKFDANGVSLMGKPEQTPGFQAADFATLKEQAGIFACDDGR 644
            PGRFDR + V +P+  G+   +K  T      +   + L+ +   T G   AD   +  +AG+FA  D R
Sbjct:  310 PGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLAR--ITDGASGADLKAICTEAGMFAIRDER 377
The following BLAST results are available for this feature:
BLAST of EY665459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
PSMR_METJA2.474e-3953.85Proteasome-activating nucleotidase OS=Methanocaldo... [more]
PSMR_PYRFU2.476e-3953.85Proteasome-activating nucleotidase OS=Pyrococcus f... [more]
PSMR_SULIY3.227e-3953.15Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIN3.227e-3953.15Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIM3.227e-3953.15Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIL3.227e-3953.15Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIK3.227e-3953.15Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIA3.227e-3953.15Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULSO3.227e-3952.45Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PSMR_METTH4.201e-3953.85Proteasome-activating nucleotidase OS=Methanobacte... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665459 ID=EY665459; Name=EY665459; organism=Citrus sinensis; type=EST; length=834bp
CCCACGCGTCCGGTTCCTTAAGAAGCCTGAGAGATTTACAGCTGTTGGAG
CTCGTATTCCAAAGGGTGTTCTTCTCGTTGGTCCTCCAGGAACTGGGAAG
ACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTTTCTC
CATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTCGGTGCATCTA
GAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTA
TTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAATTGG
AGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACAGAAA
TGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAACTAAC
AGGGCGGACATTCTTGATTCTGCCTTATTGAGGGCCTGGACGTTTTGATA
GACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAAGAACAGAGATATT
AAAAGGTTCACGGGTAGCAACAAAAAATTTGATGCAAATGGTGTCTCCTT
GATGGGAAAGCCAGAACAAACCCCTGGGTTCCAGGCTGCTGACTTTGCAA
CCCTCAAAGAACAGGCAGGCATCTTTGCGTGCGACGACGGGCGGCAAGTG
GCTATTGTATTTGAAAAAAAATGACCAATACAAGTGAAACGCAATGTTCA
TTCACACCCAACACAATCACCCTCACCAAACACGGGCAGAAACGACTGAT
AGTCGGAACGCACAAACACGCGCCCGAGAAAAAGCAAGCACCCGAAACCT
CGGAAACAATAATGCCATCATTACAACTCAGACC
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