EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2)

HSP 1 Score: 333.569 bits (854), Expect = 8.511e-91
Identity = 174/214 (81.31%), Postives = 193/214 (90.19%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAKLWE*SFPCAVL 642
            AVAHHT  TFIRVSGSELV  +IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS R+E GSG GDSEVQRTMLELLNQLDGFEA+  IKV+MATNRIDILD ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K+++KNMS+ KLW+  F   +L
Sbjct:  197 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWKCFFLVPIL 408          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 2.096e-89
Identity = 167/206 (81.07%), Postives = 182/206 (88.35%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAKLWE 618
            AVAHHT  TFIRVSGSELV  YIGEGS+MVRELFVMAREHAPSIIFMDEIDSIGS R E G G GDSEVQRTMLELLNQLDGFE++  IK++MATNRIDILD ALLRPGRIDRKIEFPNPNE +RLDILKIHSRRMNL RGI+L+KIA  + GASGAE+KA CTEAGMFALRERR+HVTQED EMAVAKVMK+  + NMS  KL++
Sbjct:  209 AVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLEMAVAKVMKRGDESNMSFKKLFK 414          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 6.744e-88
Identity = 167/206 (81.07%), Postives = 181/206 (87.86%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAKLWE 618
            AVAHHT   FIRVSGSELV  YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS+R +S  G+GDSEVQRTMLELLNQLDGFEA+  IKV+MATNRIDILD ALLRPGRIDRKIEFP P+ E+R +IL+IHSR MNL RGIDLK IAEKMNGASGAELK VCTEAGMFALRERR+HVTQEDFE+AVAKV+ K     MSL KL++
Sbjct:  198 AVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNKGDSGEMSLQKLFK 403          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4)

HSP 1 Score: 311.997 bits (798), Expect = 2.652e-84
Identity = 159/206 (77.18%), Postives = 181/206 (87.86%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAKLWE 618
            AVAHHT   FIRVSG+ELV  YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS R+E GSG GDSEVQRTMLELLNQLDGFE S  IK++MATNR+DILD ALLRPGRIDRKIEFP P+  +R +IL+IHSR+MNL RGI+L+K+AEKMNG SGA++K VCTEAGM+ALRERRIHVTQEDFE+AV KVM K  +  +S+AKL++
Sbjct:  201 AVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVE-GSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVMNKNQETAISVAKLFK 405          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.482e-82
Identity = 160/204 (78.43%), Postives = 175/204 (85.78%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLAKL 612
            AVAHHT   FIRVSGSELV  YIGEGSR+VRELF+MAREHAPSIIFMDEIDSIGS R +S  G+ DSEVQRTMLELLNQLDGFE+ N IKV+MATNRIDILD ALLR GRIDRKIEFP PNE +RL+ILKIHSR+MNL +GIDL+ IA KM G SGAE+KAVCTEAGM+ALRERR+HVTQEDFEMAV KV+KK    N  L KL
Sbjct:  249 AVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGS-DSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDFEMAVHKVLKKTGDLNSDLRKL 451          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.731e-59
Identity = 120/196 (61.22%), Postives = 152/196 (77.55%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETK 588
            A+AH    TFIRV GSELV  YIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+  +G G+ EV RT+++LL ++DGF+    +KV+ ATNR DILD ALLRPGR DR IE P P+ E RL+ILK+H+RRM L +G+DL+ IAE   GASGA+LKA+ TEAGMFA+RERR +VTQEDF  AV KV+  E K
Sbjct:  193 ALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTG-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.261e-59
Identity = 119/196 (60.71%), Postives = 152/196 (77.55%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETK 588
            A+AH    TFIRV GSELV  YIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ R++  +G G+ EV RT+++LL ++DGF+    +KV+ ATNR DILD ALLRPGR DR IE P P+ E RL+ILK+H+RRM L RG+DL+ IAE   GASGA+LKA+ TEAGMFA+RERR +VTQEDF  A+ KV+  E K
Sbjct:  190 AIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTG-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVLGNEKK 383          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.856e-59
Identity = 118/202 (58.42%), Postives = 157/202 (77.72%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLA 606
            A+AH    TFIRV GSELV  +IGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+  +G G+ EV RT+++LL ++DGF+ S  +K++ ATNR DILD ALLRPGR DR IE P PN +SRL+ILKIH++RMNL +G+DL+ IAE   GASGA+LKA+  EAGMFA+R+RR +VTQEDF  A+ KV+  E + +  +A
Sbjct:  192 ALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDEIDAIGAKRMDETTG-GEREVNRTLMQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNL-KGVDLRIIAEMTEGASGADLKAITMEAGMFAIRDRREYVTQEDFLKAIEKVLGSEQRLSQQIA 391          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.914e-58
Identity = 119/196 (60.71%), Postives = 151/196 (77.04%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETK 588
            A+AH    TFIRV GSELV  YIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+  +G G+ EV RT+++LL ++DGF+    +KV+ ATNR DILD ALLRPGR DR IE P P+ E RL+ILK+H+RRM L + +DL+ IAE   GASGA+LKA+ TEAGMFA+RERR +VTQEDF  AV KV+  E K
Sbjct:  193 ALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTG-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.500e-58
Identity = 117/202 (57.92%), Postives = 156/202 (77.23%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLA 606
            AVA+H   TFIRV GSELV  +IGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+  +G G+ EV RT+++LL ++DGF+    +KV+ ATNR DILD ALLRPGR DR IE P P+ + RL+ILK+H+R+MNL +G+DL+ IAE   GASGA+LKA+ TEAGMFA+R+RR +VTQ+DF  AV KV+  E +    +A
Sbjct:  191 AVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTG-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVIGSEKRLAQQIA 390          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
PRS8_XENLA8.511e-9181.3126S protease regulatory subunit 8 OS=Xenopus laevi... [more]
PRS8_NAEFO2.096e-8981.0726S protease regulatory subunit 8 homolog OS=Naegl... [more]
PRS8_SCHPO6.744e-8881.0726S protease regulatory subunit 8 homolog OS=Schiz... [more]
PRS8_YEAST2.652e-8477.1826S protease regulatory subunit 8 homolog OS=Sacch... [more]
PRS8_ENCCU2.482e-8278.4326S protease regulatory subunit 8 homolog OS=Encep... [more]
PSMR_PYRHO1.731e-5961.22Proteasome-activating nucleotidase OS=Pyrococcus h... [more]
PSMR_PYRFU2.261e-5960.71Proteasome-activating nucleotidase OS=Pyrococcus f... [more]
PSMR_THEON3.856e-5958.42Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_PYRAB1.914e-5860.71Proteasome-activating nucleotidase OS=Pyrococcus a... [more]
PSMR_PYRKO2.500e-5857.92Proteasome-activating nucleotidase OS=Pyrococcus k... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
back to top