EY665450

Overview
NameEY665450
Unique NameEY665450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.498e-58
Identity = 118/202 (58.42%), Postives = 154/202 (76.24%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKNMSLA 606
            AVA+H   TFIRV GSELV  +IGEG+R+V ELF MA+E AP+IIF+DEID+IG+ RM+  +G G+ EV RT+++LL ++DGF+    +KV+ ATNR DILD ALLRPGR DR IE P P+   RL+ILK+H+R+MNL R +DL  IA+   GASGA+LKA+ TEAGMFA+R+RR +VTQEDF  AV KV+  E +   ++A
Sbjct:  191 AVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTG-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNL-RNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVLGAEKRLAQAIA 390          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.609e-57
Identity = 114/195 (58.46%), Postives = 145/195 (74.36%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 585
            AVA+ T  TFIRV GSE V  YIGEG+R+VRE+F +A+E APSIIF+DE+D+I + R  S + +GD EVQRTM++LL +LDGF+    +KV+ ATNRIDILD A+LRPGR DR IE P P  E R+ I KIH+R+M L   +D K++A    GASGA++KA+CTEAGMFA+RE R  VT  DF  A+ KV+KK T
Sbjct:  194 AVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDT-SGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLKKTT 387          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 4.714e-57
Identity = 111/196 (56.63%), Postives = 151/196 (77.04%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM--KKE 582
            AVA+ T  TF+RV GSEL+  Y+G+G ++VRELF +A EHAPSI+F+DEID++G+ R +S SG G+ E+QRTMLELLNQLDGF++   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I  IH+ RM L   ++L ++    +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +   V+  KKE
Sbjct:  237 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKE 431          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.041e-57
Identity = 114/198 (57.58%), Postives = 151/198 (76.26%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKKN 594
            AVA+H   TFIR++  ELV  +IGEG+R+VRELF +ARE APSIIF+DEID+IG+ RM   + +GD EVQRT+ +LL ++DGF+  + IKV+ ATNR DILD ALLRPGR DR I+ P P+EE R +I KIH+R MNL   +DL+K+A+   GASGA++KA+CTEAGM A+RE R  VT +DF  AV +VM K+ +++
Sbjct:  232 AVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDAT-SGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGKKEEES 428          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.041e-57
Identity = 110/194 (56.70%), Postives = 149/194 (76.80%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 582
            AVA+ T  TF+RV GSEL+  Y+G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I +IH+ RM L   + L  +    +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +   V+ K+
Sbjct:  238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKK 430          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.041e-57
Identity = 110/194 (56.70%), Postives = 149/194 (76.80%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 582
            AVA+ T  TF+RV GSEL+  Y+G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I +IH+ RM L   + L  +    +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +   V+ K+
Sbjct:  238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKK 430          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.041e-57
Identity = 110/194 (56.70%), Postives = 149/194 (76.80%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 582
            AVA+ T  TF+RV GSEL+  Y+G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I +IH+ RM L   + L  +    +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +   V+ K+
Sbjct:  238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKK 430          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.050e-56
Identity = 109/196 (55.61%), Postives = 150/196 (76.53%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETK 588
            AVA+ T  TF+RV GSEL+  Y+G+G ++VRELF +A EH PSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I +IH+ RM L   + L ++    +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +    + K+T+
Sbjct:  238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENFLYKKTE 432          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.372e-56
Identity = 111/196 (56.63%), Postives = 153/196 (78.06%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM--KKE 582
            AVA+ T  TF+R+ GSEL+  Y+G+G +MVRELF +A E+APSI+F+DEID++G+ R +S SG G+ E+QRTMLELLNQLDGF++   +KVLMATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I +IH+ RM L + ++L++     +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +   V+  KKE
Sbjct:  241 AVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKKE 435          
BLAST of EY665450 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.212e-56
Identity = 111/197 (56.35%), Postives = 152/197 (77.16%), Query Frame = 1
Query:    1 AVAHHTPFTFIRVSGSELVPIYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETKK 591
            AVA  T  TFIRV GSELV  +IGEG+ +V+++F +A+E APSIIF+DEID+I + R ++ +G GD EVQRT+++LL ++DGF+A   +K++ ATNR DILD A+LRPGR DR IE P P+E+ RL+ILKIH+R+MNL   ++L++IA+   G  GAELKA+CTEAGM A+RE R +VT +DF  AV K+M+K+  K
Sbjct:  223 AVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTG-GDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK 418          
The following BLAST results are available for this feature:
BLAST of EY665450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
PSMR_THEGJ9.498e-5858.42Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_ARCFU3.609e-5758.46Proteasome-activating nucleotidase OS=Archaeoglobu... [more]
PRS4_DROME4.714e-5756.6326S protease regulatory subunit 4 OS=Drosophila me... [more]
PSMR_METKA8.041e-5757.58Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PRS4_RAT8.041e-5756.7026S protease regulatory subunit 4 OS=Rattus norveg... [more]
PRS4_MOUSE8.041e-5756.7026S protease regulatory subunit 4 OS=Mus musculus ... [more]
PRS4_HUMAN8.041e-5756.7026S protease regulatory subunit 4 OS=Homo sapiens ... [more]
PRS4_CHICK1.050e-5655.6126S protease regulatory subunit 4 OS=Gallus gallus... [more]
PRS4_CAEEL1.372e-5656.63Probable 26S protease regulatory subunit 4 OS=Caen... [more]
PSMR_METJA5.212e-5656.35Proteasome-activating nucleotidase OS=Methanocaldo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665450 ID=EY665450; Name=EY665450; organism=Citrus sinensis; type=EST; length=835bp
GCTGTGGCTCATCATACCCCTTTTACTTTCATCAGGGTTTCTGGTTCTGA
ATTAGTCCCCATTTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTT
TTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATT
GACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAG
TGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTG
AAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATT
CTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATT
TCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAA
GAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAG
ATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGG
TATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTG
AGATGGCAGTGGCCAAGGTCATGAAAAAAGAAACAAAGAAAAACATGTCC
TTGGCGAAGTTGTGGGAGTAATCATTTCCATGTGCTGTGCTGGGTATTTG
CTTATTTTCTGAGCAAAATTCAAGTAGCCCTTAACGGGCCTTCCTTCTGG
TTCTGGGGACATTTGCCCAATAAGCCCCTTTTTCCCTGACTGGTTGTCTT
TTCTGGCCCTCCTACCCCCCTATGGAAAACAAAATTTGCCACCCTATTTT
TATCCAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
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