EY665416

Overview
NameEY665416
Unique NameEY665416
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER3_RAPSA (Ferredoxin, leaf L-A OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.338e-28
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            GE+E+ C DD ++LDAAEEAG+DLPYSCRAG+CSSC GKVVSG+V            I E F LTCAAYPTSDVTIETH+EE++
Sbjct:   12 GEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIAEGFVLTCAAYPTSDVTIETHREEDM 95          

HSP 2 Score: 26.5646 bits (57), Expect = 4.338e-28
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKVK ITPEG
Sbjct:    1 ATYKVKFITPEG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_DATST (Ferredoxin OS=Datura stramonium PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.012e-26
Identity = 54/86 (62.79%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E NCPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTV            + + F LTC AYP SDVTIETHKEEEL G
Sbjct:   12 GPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          

HSP 2 Score: 26.5646 bits (57), Expect = 5.012e-26
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TP+G
Sbjct:    1 ATYKVKLVTPDG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_DATQU (Ferredoxin OS=Datura quercifolia PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.012e-26
Identity = 54/86 (62.79%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E NCPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTV            + + F LTC AYP SDVTIETHKEEEL G
Sbjct:   12 GPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          

HSP 2 Score: 26.5646 bits (57), Expect = 5.012e-26
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TP+G
Sbjct:    1 ATYKVKLVTPDG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_DATME (Ferredoxin OS=Datura metel PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 8.495e-26
Identity = 54/86 (62.79%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E +CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTV            + E F LTC AYP SDVTIETHKEEEL G
Sbjct:   12 GPVEFDCPDDVYILDRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSDVTIETHKEEELTG 97          

HSP 2 Score: 26.5646 bits (57), Expect = 8.495e-26
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TP+G
Sbjct:    1 ATYKVKLVTPDG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_DATIN (Ferredoxin OS=Datura inoxia PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 8.495e-26
Identity = 54/86 (62.79%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E +CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTV            + E F LTC AYP SDVTIETHKEEEL G
Sbjct:   12 GPVEFDCPDDVYILDRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSDVTIETHKEEELTG 97          

HSP 2 Score: 26.5646 bits (57), Expect = 8.495e-26
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TP+G
Sbjct:    1 ATYKVKLVTPDG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_SOLLY (Ferredoxin OS=Solanum lyratum PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.440e-25
Identity = 51/86 (59.30%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E NCPDD +ILD+AEE G DLPYSCRAGACSSC GK+ +G V            + E F LTC AYP S+VTIETHKE++L G
Sbjct:   12 GPVEFNCPDDVYILDSAEENGHDLPYSCRAGACSSCAGKITAGNVDQSDNSFLDDDQVAEGFVLTCVAYPKSNVTIETHKEDDLVG 97          

HSP 2 Score: 28.1054 bits (61), Expect = 1.440e-25
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKVKLITPEG
Sbjct:    1 ATYKVKLITPEG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER1_PHYES (Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.874e-25
Identity = 53/85 (62.35%), Postives = 62/85 (72.94%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELA 463
            G + I+CPDD+++LDAAEEAGLDLPYSCRAG+CSSC GKV +GTV            I   F LTC AYP  DVTIETHKEE++A
Sbjct:   12 GTQTIDCPDDTYVLDAAEEAGLDLPYSCRAGSCSSCAGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAYPKGDVTIETHKEEDIA 96          

HSP 2 Score: 23.483 bits (49), Expect = 1.874e-25
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKV L+TP G
Sbjct:    1 ATYKVTLVTPSG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER1_HYONI (Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.440e-25
Identity = 53/86 (61.63%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E NCPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTV            I + F LTC AYP SDVTIETHKEE+L G
Sbjct:   12 GPVEFNCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEDLTG 97          

HSP 2 Score: 26.5646 bits (57), Expect = 2.440e-25
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TP+G
Sbjct:    1 ATYKVKLVTPDG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_WHEAT (Ferredoxin, chloroplastic OS=Triticum aestivum GN=PETF PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.028e-25
Identity = 48/84 (57.14%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GK+VSG +            +   + LTC AYP SD+ IETHKEEEL
Sbjct:   58 GEVELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEAGWVLTCHAYPKSDIVIETHKEEEL 141          

HSP 2 Score: 35.039 bits (79), Expect = 4.028e-25
Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 1
Query:  142 KANRGGRVVAMATYKVKLITPEG 210
            K  RG R+ A ATYKVKL+TPEG
Sbjct:   36 KQVRGARLRAQATYKVKLVTPEG 58          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER5_MAIZE (Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.042e-25
Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GKVVSG++            + + + LTC AYPTSDV IETHKE++L
Sbjct:   50 GEVELQVPDDVYILDYAEEEGIDLPYSCRAGSCSSCAGKVVSGSLDQSDQSFLDDSQVADGWVLTCVAYPTSDVVIETHKEDDL 133          

HSP 2 Score: 30.4166 bits (67), Expect = 4.042e-25
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 1
Query:   34 MATLSSAMVSTSFIRSKPTATSLKAMPNMGQAIFGLKANRGGRVVAMATYKVKLITPEG 210
            MAT+ S+  + +F      + SL+A P    A   +      R+ A ATY VKLITPEG
Sbjct:    1 MATVLSSPRAPAF------SFSLRAAPATTVA---MTRGASSRLRAQATYNVKLITPEG 50          
The following BLAST results are available for this feature:
BLAST of EY665416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER3_RAPSA4.338e-2865.48Ferredoxin, leaf L-A OS=Raphanus sativus PE=1 SV=1[more]
FER_DATST5.012e-2662.79Ferredoxin OS=Datura stramonium PE=1 SV=1[more]
FER_DATQU5.012e-2662.79Ferredoxin OS=Datura quercifolia PE=1 SV=1[more]
FER_DATME8.495e-2662.79Ferredoxin OS=Datura metel PE=1 SV=1[more]
FER_DATIN8.495e-2662.79Ferredoxin OS=Datura inoxia PE=1 SV=1[more]
FER_SOLLY1.440e-2559.30Ferredoxin OS=Solanum lyratum PE=1 SV=1[more]
FER1_PHYES1.874e-2562.35Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1[more]
FER1_HYONI2.440e-2561.63Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_WHEAT4.028e-2557.14Ferredoxin, chloroplastic OS=Triticum aestivum GN=... [more]
FER5_MAIZE4.042e-2558.33Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665416 ID=EY665416; Name=EY665416; organism=Citrus sinensis; type=EST; length=1026bp
CAACTGTCCCTTCCTTGAGCAAGAGCAGCAACCATGGCCACCCTCTCAAG
CGCCATGGTCAGCACCTCATTCATCAGAAGCAAGCCTACAGCGACCAGCC
TCAAAGCCATGCCTAACATGGGTCAGGCTATATTTGGCCTCAAAGCCAAC
AGAGGTGGCCGTGTTGTAGCCATGGCTACATACAAAGTCAAGCTCATTAC
ACCTGAGGGGAGAGGAAGAAATCAACTGTCCTGATGACTCGTTTATTCTT
GATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGG
GGCTTGCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGT
CGGAGCAAAGCTCTCTGGATGATGATCAAATTGGAGAAAGGTTTTGTCTC
ACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAGAGACTCACAAGGA
AGAGGAGCTCGCTGGTTATAATGTGCTCTTGAATCTCATAATATCTTCTC
TTTATGTGTTGTGTTTTGCTGATAATTTTATGCTTTGAAAGGAAATTGAG
TATTTGAGAAGATTCTGGAATGTGTTTTTATTCTTGTTGCAAAAAATTGT
TGAATTGCACCGGCCAGAATGCCCTCGACCTAAAAGGGGAGTTCCCCTCC
ATCCAAACTGGTACCTTTCAAATTAAAATTCAACAAAAACAAAATTTTCC
GATAAAAAATCCACAGATAAAAAAACAATAAAAAGATTGTAAAGAATGAA
GATGACGAGAAAAATGAAGTGAACCATGGACGTTGATGATGAAAAGAGAT
GGGGGGGGGGGGGCCTAGGAGAAATAAGGAGGGGGGGGTTCTCTCTTTAT
ATCCTATACATAACGTGGTATTGACGGGGGGGACCCTGTTCACATCCCCA
ATGAACACTTCTCAGGATAAAAAACCCCAAACTCCAATTACAAGTGGAAA
ACCCCTTGAATTATGGGAGGTCGTTATTACATATATCTGTCTTTTTTTCT
GCAANATAATAAGGAGTGTAAATATA
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