EY665416

Overview
NameEY665416
Unique NameEY665416
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER2_APHSA (Ferredoxin-2 OS=Aphanothece sacrum PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.340e-14
Identity = 44/88 (50.00%), Postives = 52/88 (59.09%), Query Frame = 2
Query:  212 EEEINC----PDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTV-XXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            EE IN      DD  ILDA EEAGLDLP SCRAG+CS+C GK+VSG               +   + +TC AYPT D TI TH+E E+
Sbjct:   12 EEGINAILEVADDQTILDAGEEAGLDLPSSCRAGSCSTCAGKLVSGAAPNQDDQAFLDDDQLAAGWVMTCVAYPTGDCTIMTHQESEV 99          

HSP 2 Score: 20.4014 bits (41), Expect = 1.340e-14
Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 1
Query:  172 MATYKVKLITPE 207
            MATYKV LI  E
Sbjct:    1 MATYKVTLINEE 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FERH_ANAVT (Ferredoxin, heterocyst OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=fdxH1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.992e-14
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 2
Query:  221 INCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELA 463
            I   +++ ILD AEE G++LP+SC +G+CSSC GKVV G V            +G+ F L C  YP S+ TI+TH+E  LA
Sbjct:   19 IEIDEETTILDGAEENGIELPFSCHSGSCSSCVGKVVEGEVDQSDQIFLDDEQVGKGFALLCVTYPRSNCTIKTHQEPYLA 99          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FERH_ANASP (Ferredoxin, heterocyst OS=Anabaena sp. (strain PCC 7120) GN=fdxH PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 5.104e-14
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 2
Query:  221 INCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELA 463
            I   +++ ILD AEE G++LP+SC +G+CSSC GKVV G V            +G+ F L C  YP S+ TI+TH+E  LA
Sbjct:   19 IEIDEETTILDGAEENGIELPFSCHSGSCSSCVGKVVEGEVDQSDQIFLDDEQMGKGFALLCVTYPRSNCTIKTHQEPYLA 99          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER2_PLEBO (Ferredoxin-2 OS=Plectonema boryanum GN=fdxH PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.666e-14
Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 2
Query:  233 DDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            +D+ +L+AAEEA LDLP+SC +GACSSC GKVV G +            + + F L C  YP +D TI TH+E  L
Sbjct:   23 EDTTVLEAAEEAELDLPFSCHSGACSSCVGKVVEGEINQDDQTFLDEEQVAKGFVLLCVTYPRTDCTIRTHQEAYL 98          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER2_EQUTE (Ferredoxin-2 OS=Equisetum telmateia PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.643e-13
Identity = 40/77 (51.95%), Postives = 49/77 (63.64%), Query Frame = 2
Query:  230 PDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            P +  I  A+E+A  DLP SC+AGACS+C GK+VSGTV            I + + LTC A P SDV IETHKE+EL
Sbjct:   19 PGERLIDIASEKA--DLPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPESDVVIETHKEDEL 93          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER2_EQUAR (Ferredoxin-2 OS=Equisetum arvense PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.642e-12
Identity = 39/77 (50.65%), Postives = 48/77 (62.34%), Query Frame = 2
Query:  230 PDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            P +  I   +E+A  DLP SC+AGACS+C GK+VSGTV            I + + LTC A P SDV IETHKE+EL
Sbjct:   19 PGERLIDIGSEKA--DLPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPESDVVIETHKEDEL 93          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FERH_FREDI (Ferredoxin, heterocyst OS=Fremyella diplosiphon GN=fdxH PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.801e-12
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 2
Query:  212 EEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            +  I   +D+ IL+ A E G++LP+SC +G+CSSC GKVV G V            + + F L C  YP S+ TI+TH+E  L
Sbjct:   16 DSTIEIDEDTTILEGAAENGIELPFSCHSGSCSSCVGKVVEGEVDQSDQIFLDDEQMSKGFALLCVTYPRSNCTIKTHQEPYL 98          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER2_SYNP6 (Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petF2 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 8.149e-12
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 2
Query:  236 DSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            D  +LD+A+ AG+DLP SC  G C++C  +++SG V              + + L C AYP SD+ IETHKE+EL
Sbjct:   22 DQSVLDSAQAAGVDLPASCLTGVCTTCAARILSGEVDQPDAMGVGPEPAKQGYTLLCVAYPRSDLKIETHKEDEL 96          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FERV_ANAVT (Ferredoxin, vegetative OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=fdxH2 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.815e-11
Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 2
Query:  233 DDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            +++ ILDAAE+  ++LP+SC++G+CSSC  KVV G V            + + F + C +YP SD TI TH+E  L
Sbjct:   23 ENTTILDAAEQQDIELPFSCQSGSCSSCVAKVVEGEVDQSEQVFLDEEQMAKGFIVLCVSYPRSDCTIRTHQEPYL 98          
The following BLAST results are available for this feature:
BLAST of EY665416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER2_APHSA1.340e-1450.00Ferredoxin-2 OS=Aphanothece sacrum PE=1 SV=2[more]
FERH_ANAVT2.992e-1445.68Ferredoxin, heterocyst OS=Anabaena variabilis (str... [more]
FERH_ANASP5.104e-1445.68Ferredoxin, heterocyst OS=Anabaena sp. (strain PCC... [more]
FER2_PLEBO6.666e-1447.37Ferredoxin-2 OS=Plectonema boryanum GN=fdxH PE=3 S... [more]
FER2_EQUTE5.643e-1351.95Ferredoxin-2 OS=Equisetum telmateia PE=1 SV=1[more]
FER2_EQUAR1.642e-1250.65Ferredoxin-2 OS=Equisetum arvense PE=1 SV=1[more]
FERH_FREDI2.801e-1240.96Ferredoxin, heterocyst OS=Fremyella diplosiphon GN... [more]
FER2_SYNP68.149e-1242.67Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 271... [more]
FERV_ANAVT1.815e-1142.11Ferredoxin, vegetative OS=Anabaena variabilis (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665416 ID=EY665416; Name=EY665416; organism=Citrus sinensis; type=EST; length=1026bp
CAACTGTCCCTTCCTTGAGCAAGAGCAGCAACCATGGCCACCCTCTCAAG
CGCCATGGTCAGCACCTCATTCATCAGAAGCAAGCCTACAGCGACCAGCC
TCAAAGCCATGCCTAACATGGGTCAGGCTATATTTGGCCTCAAAGCCAAC
AGAGGTGGCCGTGTTGTAGCCATGGCTACATACAAAGTCAAGCTCATTAC
ACCTGAGGGGAGAGGAAGAAATCAACTGTCCTGATGACTCGTTTATTCTT
GATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGG
GGCTTGCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGT
CGGAGCAAAGCTCTCTGGATGATGATCAAATTGGAGAAAGGTTTTGTCTC
ACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAGAGACTCACAAGGA
AGAGGAGCTCGCTGGTTATAATGTGCTCTTGAATCTCATAATATCTTCTC
TTTATGTGTTGTGTTTTGCTGATAATTTTATGCTTTGAAAGGAAATTGAG
TATTTGAGAAGATTCTGGAATGTGTTTTTATTCTTGTTGCAAAAAATTGT
TGAATTGCACCGGCCAGAATGCCCTCGACCTAAAAGGGGAGTTCCCCTCC
ATCCAAACTGGTACCTTTCAAATTAAAATTCAACAAAAACAAAATTTTCC
GATAAAAAATCCACAGATAAAAAAACAATAAAAAGATTGTAAAGAATGAA
GATGACGAGAAAAATGAAGTGAACCATGGACGTTGATGATGAAAAGAGAT
GGGGGGGGGGGGGCCTAGGAGAAATAAGGAGGGGGGGGTTCTCTCTTTAT
ATCCTATACATAACGTGGTATTGACGGGGGGGACCCTGTTCACATCCCCA
ATGAACACTTCTCAGGATAAAAAACCCCAAACTCCAATTACAAGTGGAAA
ACCCCTTGAATTATGGGAGGTCGTTATTACATATATCTGTCTTTTTTTCT
GCAANATAATAAGGAGTGTAAATATA
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