EY665416

Overview
NameEY665416
Unique NameEY665416
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER1_PHYAM (Ferredoxin-1 OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.134e-25
Identity = 52/84 (61.90%), Postives = 62/84 (73.81%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            G + I+CPDD+++LDAAEEAGLDLPYSCRAG+CSSCTGKV +GTV            I   F LTC A+P  DVTIETHKEE++
Sbjct:   12 GTQTIDCPDDTYVLDAAEEAGLDLPYSCRAGSCSSCTGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAFPKGDVTIETHKEEDI 95          

HSP 2 Score: 23.483 bits (49), Expect = 4.134e-25
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKV L+TP G
Sbjct:    1 ATYKVTLVTPSG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.134e-25
Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            GE  I C DD++ILDAAEEAGLDLPYSCRAGACS+C GK+ +G+V            I   + LTC AYPTSD TIETHKEE+L
Sbjct:   13 GENSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96          

HSP 2 Score: 25.409 bits (54), Expect = 4.134e-25
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  172 MATYKVKLITPEGRGRNQLS 231
            MA+Y VKLITP+G    + S
Sbjct:    1 MASYTVKLITPDGENSIECS 20          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_SYNY3 (Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803) GN=petF PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.134e-25
Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            GE  I C DD++ILDAAEEAGLDLPYSCRAGACS+C GK+ +G+V            I   + LTC AYPTSD TIETHKEE+L
Sbjct:   13 GESSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96          

HSP 2 Score: 25.409 bits (54), Expect = 4.134e-25
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  172 MATYKVKLITPEGRGRNQLS 231
            MA+Y VKLITP+G    + S
Sbjct:    1 MASYTVKLITPDGESSIECS 20          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER1_APHFL (Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 5.381e-25
Identity = 52/80 (65.00%), Postives = 62/80 (77.50%), Query Frame = 2
Query:  221 INCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            I+CPDD++ILDAAEEAGLDLPYSCRAGACS+C GK+V+GT+            +   + LTC AYPTSDVTIETHKEE+L
Sbjct:   18 IDCPDDTYILDAAEEAGLDLPYSCRAGACSTCAGKLVTGTIDQSDQSFLDDDQVEAGYVLTCVAYPTSDVTIETHKEEDL 97          

HSP 2 Score: 22.3274 bits (46), Expect = 5.381e-25
Identity = 10/13 (76.92%), Postives = 10/13 (76.92%), Query Frame = 1
Query:  172 MATYKVKLITPEG 210
            MATYKV LI  EG
Sbjct:    1 MATYKVTLIDAEG 13          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_SOLLS (Ferredoxin OS=Solanum lasiocarpum PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.381e-25
Identity = 54/86 (62.79%), Postives = 58/86 (67.44%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E NCPDD +ILD AEE G DLPYSCRAGACSSC GK+V G+V            IG  F LTC AYP S+VTIETHKEE L G
Sbjct:   12 GPIEFNCPDDVYILDRAEEEGHDLPYSCRAGACSSCAGKIVDGSVDQSDNSFLDDDQIGGGFVLTCVAYPKSNVTIETHKEEALVG 97          

HSP 2 Score: 25.409 bits (54), Expect = 5.381e-25
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            A+YKVKLITP+G
Sbjct:    1 ASYKVKLITPDG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_DATAR (Ferredoxin OS=Datura arborea PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 5.381e-25
Identity = 52/86 (60.47%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTV            + + F LTC AYP SDVTIETHKEEEL G
Sbjct:   12 GPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          

HSP 2 Score: 26.5646 bits (57), Expect = 5.381e-25
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TP+G
Sbjct:    1 ATYKVKLVTPDG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_COLES (Ferredoxin OS=Colocasia esculenta PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.005e-25
Identity = 52/84 (61.90%), Postives = 58/84 (69.05%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            G++E  CPDD +ILD AEE G+DLPYSCRAG+CSSC GKV  G V            IGE + LTC AYP SD TIETHKEEEL
Sbjct:   12 GQQEFQCPDDVYILDQAEEVGIDLPYSCRAGSCSSCAGKVKVGDVDQSDGSFLDDEQIGEGWVLTCVAYPVSDGTIETHKEEEL 95          

HSP 2 Score: 26.1794 bits (56), Expect = 7.005e-25
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  175 ATYKVKLITPEGR 213
            ATYKVKL+TP G+
Sbjct:    1 ATYKVKLVTPSGQ 13          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FERB_ALOMA (Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.005e-25
Identity = 52/81 (64.20%), Postives = 57/81 (70.37%), Query Frame = 2
Query:  218 EINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            E  CPDD +ILD AEE G+DLPYSCRAG+CSSC GKV +G V            IGE + LTC AYPTSDV IETHKEEEL
Sbjct:   16 EFECPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVKNGNVDQSDGSFLDDDQIGEGWVLTCVAYPTSDVVIETHKEEEL 96          

HSP 2 Score: 26.1794 bits (56), Expect = 7.005e-25
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  175 ATYKVKLITPEGR 213
            ATYKVKL+TP G+
Sbjct:    1 ATYKVKLVTPSGQ 13          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_ATRBE (Ferredoxin OS=Atropa belladonna PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.119e-25
Identity = 52/86 (60.47%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTV            + + F LTC AYP SDVTIETHKEEEL G
Sbjct:   12 GPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          

HSP 2 Score: 26.5646 bits (57), Expect = 9.119e-25
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TP+G
Sbjct:    1 ATYKVKLVTPDG 12          
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_SOLAB (Ferredoxin OS=Solanum abutiloides PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.187e-24
Identity = 51/84 (60.71%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            G  E  CPDD +ILD AEE G DLPYSCRAG+CSSC GK+ +G+V            I + F LTC AYP SDVTIETHKEEEL
Sbjct:   12 GPVEFECPDDEYILDRAEEEGHDLPYSCRAGSCSSCAGKIAAGSVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEEL 95          

HSP 2 Score: 26.5646 bits (57), Expect = 1.187e-24
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TP+G
Sbjct:    1 ATYKVKLVTPDG 12          
The following BLAST results are available for this feature:
BLAST of EY665416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER1_PHYAM4.134e-2561.90Ferredoxin-1 OS=Phytolacca americana PE=1 SV=1[more]
FER_SYNY44.134e-2561.90Ferredoxin OS=Synechocystis sp. (strain PCC 6714) ... [more]
FER_SYNY34.134e-2561.90Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803... [more]
FER1_APHFL5.381e-2565.00Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2[more]
FER_SOLLS5.381e-2562.79Ferredoxin OS=Solanum lasiocarpum PE=1 SV=1[more]
FER_DATAR5.381e-2560.47Ferredoxin OS=Datura arborea PE=1 SV=1[more]
FER_COLES7.005e-2561.90Ferredoxin OS=Colocasia esculenta PE=1 SV=1[more]
FERB_ALOMA7.005e-2564.20Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1[more]
FER_ATRBE9.119e-2560.47Ferredoxin OS=Atropa belladonna PE=1 SV=1[more]
FER_SOLAB1.187e-2460.71Ferredoxin OS=Solanum abutiloides PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665416 ID=EY665416; Name=EY665416; organism=Citrus sinensis; type=EST; length=1026bp
CAACTGTCCCTTCCTTGAGCAAGAGCAGCAACCATGGCCACCCTCTCAAG
CGCCATGGTCAGCACCTCATTCATCAGAAGCAAGCCTACAGCGACCAGCC
TCAAAGCCATGCCTAACATGGGTCAGGCTATATTTGGCCTCAAAGCCAAC
AGAGGTGGCCGTGTTGTAGCCATGGCTACATACAAAGTCAAGCTCATTAC
ACCTGAGGGGAGAGGAAGAAATCAACTGTCCTGATGACTCGTTTATTCTT
GATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGG
GGCTTGCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGT
CGGAGCAAAGCTCTCTGGATGATGATCAAATTGGAGAAAGGTTTTGTCTC
ACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAGAGACTCACAAGGA
AGAGGAGCTCGCTGGTTATAATGTGCTCTTGAATCTCATAATATCTTCTC
TTTATGTGTTGTGTTTTGCTGATAATTTTATGCTTTGAAAGGAAATTGAG
TATTTGAGAAGATTCTGGAATGTGTTTTTATTCTTGTTGCAAAAAATTGT
TGAATTGCACCGGCCAGAATGCCCTCGACCTAAAAGGGGAGTTCCCCTCC
ATCCAAACTGGTACCTTTCAAATTAAAATTCAACAAAAACAAAATTTTCC
GATAAAAAATCCACAGATAAAAAAACAATAAAAAGATTGTAAAGAATGAA
GATGACGAGAAAAATGAAGTGAACCATGGACGTTGATGATGAAAAGAGAT
GGGGGGGGGGGGGCCTAGGAGAAATAAGGAGGGGGGGGTTCTCTCTTTAT
ATCCTATACATAACGTGGTATTGACGGGGGGGACCCTGTTCACATCCCCA
ATGAACACTTCTCAGGATAAAAAACCCCAAACTCCAATTACAAGTGGAAA
ACCCCTTGAATTATGGGAGGTCGTTATTACATATATCTGTCTTTTTTTCT
GCAANATAATAAGGAGTGTAAATATA
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