EY665416

Overview
NameEY665416
Unique NameEY665416
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_SCEQU (Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.545e-24
Identity = 54/84 (64.29%), Postives = 61/84 (72.62%), Query Frame = 2 
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            G++ I CPDD++ILDAAEEAGLDLPYSCRAGACSSC GKV +GTV            +   F LTC AYPTSD TI THKEE+L
Sbjct:   12 GDQTIECPDDTYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTVDQSDQSFLDDSQMDGGFVLTCVAYPTSDCTIATHKEEDL 95

HSP 2 Score: 21.1718 bits (43), Expect = 1.545e-24
Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 1 
Query:  175 ATYKVKLITPEG 210
            ATYKV L TP G
Sbjct:    1 ATYKVTLKTPSG 12
[Close]
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_SOLNI (Ferredoxin OS=Solanum nigrum PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.545e-24
Identity = 51/86 (59.30%), Postives = 59/86 (68.60%), Query Frame = 2 
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTV            + + F LTC AYP SDVTIETHKEE+L G
Sbjct:   12 GPIEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPKSDVTIETHKEEDLTG 97

HSP 2 Score: 26.5646 bits (57), Expect = 1.545e-24
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TP+G
Sbjct:    1 ATYKVKLVTPDG 12
[Close]
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_PHYAF (Ferredoxin OS=Physalis alkekengi var. francheti PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.545e-24
Identity = 51/84 (60.71%), Postives = 58/84 (69.05%), Query Frame = 2 
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            G    +CPD+ +ILDAAEE G DLPYSCRAG+CSSC GKV +GTV            + + F LTC AYP SDVTIETHKEEEL
Sbjct:   12 GPVVFDCPDNEYILDAAEEQGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQVADGFVLTCVAYPQSDVTIETHKEEEL 95

HSP 2 Score: 26.9498 bits (58), Expect = 1.545e-24
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:  175 ATYKVKLITPEG 210
            ATYKVKLITP+G
Sbjct:    1 ATYKVKLITPDG 12
[Close]
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_LYCCN (Ferredoxin OS=Lycium chinense PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.011e-24
Identity = 52/86 (60.47%), Postives = 58/86 (67.44%), Query Frame = 2 
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTV            I + F LTC AYP SDVTIETHKEE L G
Sbjct:   12 GPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEALTG 97

HSP 2 Score: 26.5646 bits (57), Expect = 2.011e-24
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TP+G
Sbjct:    1 ATYKVKLVTPDG 12
[Close]
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER2_HYONI (Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.011e-24
Identity = 51/86 (59.30%), Postives = 59/86 (68.60%), Query Frame = 2 
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEELAG 466
            G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTV            + + F LTC AYP SDVTIETHKEE+L G
Sbjct:   12 GPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVKAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEDLTG 97

HSP 2 Score: 26.5646 bits (57), Expect = 2.011e-24
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TP+G
Sbjct:    1 ATYKVKLVTPDG 12
[Close]
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_HORVU (Ferredoxin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.011e-24
Identity = 51/84 (60.71%), Postives = 59/84 (70.24%), Query Frame = 2 
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GK+VSG +            + E + LTCAAYP SDV IETHKEEEL
Sbjct:   12 GEVELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEEGWVLTCAAYPKSDVVIETHKEEEL 95

HSP 2 Score: 27.7202 bits (60), Expect = 2.011e-24
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:  175 ATYKVKLITPEG 210
            ATYKVKL+TPEG
Sbjct:    1 ATYKVKLVTPEG 12
[Close]
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_CHLFU (Ferredoxin OS=Chlorella fusca PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.442e-24
Identity = 55/84 (65.48%), Postives = 61/84 (72.62%), Query Frame = 2 
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            GEE I CP+D++ILDAAEEAGLDLPYSCRAGACSSC GKV SG V            +G+ F LTC AYPTSDVTI TH+E  L
Sbjct:   10 GEETIECPEDTYILDAAEEAGLDLPYSCRAGACSSCAGKVESGEVDQSDQSFLDDAQMGKGFVLTCVAYPTSDVTILTHQEAAL 93
[Close]
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_CHLRE (Ferredoxin, chloroplastic OS=Chlamydomonas reinhardtii GN=PETF PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 3.190e-24
Identity = 53/84 (63.10%), Postives = 61/84 (72.62%), Query Frame = 2 
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            G++ I CP D++ILDAAEEAGLDLPYSCRAGACSSC GKV +GTV            +G  F LTC AYPTSD TI+TH+EE L
Sbjct:   42 GDKTIECPADTYILDAAEEAGLDLPYSCRAGACSSCAGKVAAGTVDQSDQSFLDDAQMGNGFVLTCVAYPTSDCTIQTHQEEAL 125
[Close]
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER2_SPIOL (Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.407e-24
Identity = 53/84 (63.10%), Postives = 59/84 (70.24%), Query Frame = 2 
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            G + I C DD +ILDAAEE G+DLPYSCRAGACSSC GKV SG+V            + E + LTC AYPT DVTIETHKEEEL
Sbjct:   12 GSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEEL 95

HSP 2 Score: 23.483 bits (49), Expect = 3.407e-24
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 
Query:  175 ATYKVKLITPEG 210
            ATYKV L+TP G
Sbjct:    1 ATYKVTLVTPSG 12
[Close]
BLAST of EY665416 vs. ExPASy Swiss-Prot
Match: FER_TOBAC (Ferredoxin OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.407e-24
Identity = 51/84 (60.71%), Postives = 57/84 (67.86%), Query Frame = 2 
Query:  209 GEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVXXXXXXXXXXXXIGERFCLTCAAYPTSDVTIETHKEEEL 460
            G  E +CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +G V            + + F LTC AYP SDVTIETHKEEEL
Sbjct:   12 GAVEFDCPDDVYILDQAEEMGHDLPYSCRAGSCSSCAGKVTAGNVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95

HSP 2 Score: 26.5646 bits (57), Expect = 3.407e-24
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:  175 ATYKVKLITPEG 210
            A+YKVKLITPEG
Sbjct:    1 ASYKVKLITPEG 12
The following BLAST results are available for this feature:
BLAST of EY665416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER_SCEQU1.545e-2464.29Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1[more]
FER_SOLNI1.545e-2459.30Ferredoxin OS=Solanum nigrum PE=1 SV=1[more]
FER_PHYAF1.545e-2460.71Ferredoxin OS=Physalis alkekengi var. francheti PE... [more]
FER_LYCCN2.011e-2460.47Ferredoxin OS=Lycium chinense PE=1 SV=1[more]
FER2_HYONI2.011e-2459.30Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_HORVU2.011e-2460.71Ferredoxin OS=Hordeum vulgare PE=1 SV=1[more]
FER_CHLFU2.442e-2465.48Ferredoxin OS=Chlorella fusca PE=1 SV=1[more]
FER_CHLRE3.190e-2463.10Ferredoxin, chloroplastic OS=Chlamydomonas reinhar... [more]
FER2_SPIOL3.407e-2463.10Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1[more]
FER_TOBAC3.407e-2460.71Ferredoxin OS=Nicotiana tabacum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665416 ID=EY665416; Name=EY665416; organism=Citrus sinensis; type=EST; length=1026bp
CAACTGTCCCTTCCTTGAGCAAGAGCAGCAACCATGGCCACCCTCTCAAG
CGCCATGGTCAGCACCTCATTCATCAGAAGCAAGCCTACAGCGACCAGCC
TCAAAGCCATGCCTAACATGGGTCAGGCTATATTTGGCCTCAAAGCCAAC
AGAGGTGGCCGTGTTGTAGCCATGGCTACATACAAAGTCAAGCTCATTAC
ACCTGAGGGGAGAGGAAGAAATCAACTGTCCTGATGACTCGTTTATTCTT
GATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGG
GGCTTGCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGT
CGGAGCAAAGCTCTCTGGATGATGATCAAATTGGAGAAAGGTTTTGTCTC
ACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAGAGACTCACAAGGA
AGAGGAGCTCGCTGGTTATAATGTGCTCTTGAATCTCATAATATCTTCTC
TTTATGTGTTGTGTTTTGCTGATAATTTTATGCTTTGAAAGGAAATTGAG
TATTTGAGAAGATTCTGGAATGTGTTTTTATTCTTGTTGCAAAAAATTGT
TGAATTGCACCGGCCAGAATGCCCTCGACCTAAAAGGGGAGTTCCCCTCC
ATCCAAACTGGTACCTTTCAAATTAAAATTCAACAAAAACAAAATTTTCC
GATAAAAAATCCACAGATAAAAAAACAATAAAAAGATTGTAAAGAATGAA
GATGACGAGAAAAATGAAGTGAACCATGGACGTTGATGATGAAAAGAGAT
GGGGGGGGGGGGGCCTAGGAGAAATAAGGAGGGGGGGGTTCTCTCTTTAT
ATCCTATACATAACGTGGTATTGACGGGGGGGACCCTGTTCACATCCCCA
ATGAACACTTCTCAGGATAAAAAACCCCAAACTCCAATTACAAGTGGAAA
ACCCCTTGAATTATGGGAGGTCGTTATTACATATATCTGTCTTTTTTTCT
GCAANATAATAAGGAGTGTAAATATA
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