EY665411

Overview
NameEY665411
Unique NameEY665411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length979
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 3.497e-73
Identity = 151/223 (67.71%), Postives = 173/223 (77.58%), Query Frame = 1
Query:  106 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTFGRPPLFDPFEEGFF 774
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQSDMK WPF+V++  G KP + V YKGE + F  EEISSMVL KMKEIAEAYLG  +++AV+TVPAYFNDSQRQATKDAG I+ L      +  PTAAAIA   G  ++   G +K   +F + GGGTF    L    E+G F
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRI-INEPTAAAIAY--GLDKKGCAGGEKNVLIFDL-GGGTFDVSIL--TIEDGIF 220          
BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 4.568e-73
Identity = 151/223 (67.71%), Postives = 172/223 (77.13%), Query Frame = 1
Query:  106 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTFGRPPLFDPFEEGFF 774
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQSDMK WPF+V++  G KP + V YKGE + F  EEISSMVL KMKEIAEAYLG  + +AV+TVPAYFNDSQRQATKDAG I+ L      +  PTAAAIA   G  ++   G +K   +F + GGGTF    L    E+G F
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRI-INEPTAAAIAY--GLDKKGCAGGEKNVLIFDL-GGGTFDVSIL--TIEDGIF 220          
BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 4.568e-73
Identity = 151/223 (67.71%), Postives = 173/223 (77.58%), Query Frame = 1
Query:  106 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTFGRPPLFDPFEEGFF 774
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQSDMK WPF+V++  G KP + V YKGE + F  EEISSMVL KMKEIAEAYLG  +++AV+TVPAYFNDSQRQATKDAG I+ L      +  PTAAAIA   G  ++   G +K   +F + GGGTF    L    E+G F
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRI-INEPTAAAIAY--GLDKKGCAGGEKNVLIFDL-GGGTFDVSIL--TIEDGIF 220          
BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 4.568e-73
Identity = 151/223 (67.71%), Postives = 173/223 (77.58%), Query Frame = 1
Query:  106 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTFGRPPLFDPFEEGFF 774
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQSDMK WPF+V++  G KP + V YKGE + F  EEISSMVL KMKEIAEAYLG  +++AV+TVPAYFNDSQRQATKDAG I+ L      +  PTAAAIA   G  ++   G +K   +F + GGGTF    L    E+G F
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRI-INEPTAAAIAY--GLDKKGCAGGEKNVLIFDL-GGGTFDVSIL--TIEDGIF 220          
BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 4.568e-73
Identity = 148/207 (71.50%), Postives = 162/207 (78.26%), Query Frame = 1
Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTF 732
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP VQSDMK WPF+V+   GDKP + VNYKGE   F  EEISSMVL KMKEIAEAYLG  + NAV+TVPAYFNDSQRQATKDAGVI+ L      +  PTAAAIA    +     TG  ++  L    GGGTF
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVV-NDGDKPKVQVNYKGENRSFYPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRI-INEPTAAAIAYGLDR-----TGKGERNVLIFDLGGGTF 205          
BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 7.791e-73
Identity = 152/224 (67.86%), Postives = 171/224 (76.34%), Query Frame = 1
Query:  103 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTFGRPPLFDPFEEGFF 774
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNPTNT+FDAKRLIGRRF D  VQ+DMK WPFKVI+  G +P + V YKGE + F  EEISSMVL KMKEIAEAYLG +I NAV+TVPAYFNDSQRQ TKDAG IS L      +  PTAAAIA    KK     G ++   +F + GGGTF    L    E+G F
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFEDSVVQADMKHWPFKVISDGG-RPRLEVEYKGEAKNFYPEEISSMVLVKMKEIAEAYLGKSINNAVITVPAYFNDSQRQRTKDAGTISGLNVLRI-INEPTAAAIAYGLDKK----VGSERNVLIFDL-GGGTFDVSIL--TIEDGIF 217          
BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 274.248 bits (700), Expect = 7.791e-73
Identity = 145/207 (70.05%), Postives = 164/207 (79.23%), Query Frame = 1
Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTF 732
            AIGIDLGTTYSCVGVWQ++RVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNPTNTVFDAKRLIGR+FSD  VQSDMK WPFKV+    DKP+I V ++GE + F+ EEISSMVL KMKE+AE+YLG  +  AVVTVPAYFNDSQRQATKDAG I+ L+     +  PTAAAIA    K  +     K++  L    GGGTF
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDSVVQSDMKHWPFKVVTKGDDKPVIQVQFRGETKTFNPEEISSMVLLKMKEVAESYLGKQVAKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRI-INEPTAAAIAYGLDKADEG----KERNVLIFDLGGGTF 207          
BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 7.791e-73
Identity = 149/224 (66.52%), Postives = 171/224 (76.34%), Query Frame = 1
Query:  103 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTFGRPPLFDPFEEGFF 774
            +GP+IGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ+DMK WPFKV++  G KP + V+YKGE + F+ EEISSMVL KM+EIAEAYLG  + NAV+TVPAYFNDSQRQATKDAGVI+ L      +  PTAAAIA    K        +++  L    GGGTF    L    E+G F
Sbjct:    5 KGPSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTVFDAKRLIGRKFNDQVVQADMKHWPFKVVSDGG-KPKVQVDYKGENKSFNPEEISSMVLVKMREIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRI-INEPTAAAIAYGMDKGMS-----RERNVLIFDLGGGTFDVSIL--TIEDGIF 219          
BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 1.018e-72
Identity = 151/221 (68.33%), Postives = 167/221 (75.57%), Query Frame = 1
Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTFGRPPLFDPFEEGFF 774
            AIGIDLGTTYSCV VWQ+DRVE+IANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F D  VQSDMK WPF+V    G KP I + YKGE++ F+ EEISSMVL KM+E AEAYLG T+K+AVVTVPAYFNDSQRQATKDAG+IS L      +  PTAAAIA    KK +      +K  L    GGGTF    L    EEG F
Sbjct:    4 AIGIDLGTTYSCVAVWQNDRVEVIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDAEVQSDMKHWPFEV-TSVGGKPQIRIEYKGEKKTFTPEEISSMVLLKMRETAEAYLGGTVKDAVVTVPAYFNDSQRQATKDAGIISGLNVMRI-INEPTAAAIAYGLDKKTE-----GEKNVLIFDLGGGTFDVSLL--TIEEGIF 215          
BLAST of EY665411 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 1.018e-72
Identity = 148/207 (71.50%), Postives = 162/207 (78.26%), Query Frame = 1
Query:  112 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEEQFSAEEISSMVLNKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISXLKCDAY*LTNPTAAAIALWAGKKRQEITG*KKKGPLF*IWGGGTF 732
            AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQSDMK WPFKV     DKP+I V Y+GEE+ F+ E+ISSMVL KMKE AEAYLG  +K AVVTVPAYFNDSQRQATKDAG IS L+     +  PTAAAIA    K        K++  L    GGGTF
Sbjct:    6 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDLVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEKISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTISGLEVLRI-INEPTAAAIAYGLDKGDDG----KERNVLIFDLGGGTF 207          
The following BLAST results are available for this feature:
BLAST of EY665411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_RAT3.497e-7367.71Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_HUMAN4.568e-7367.71Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP72_CAPHI4.568e-7367.71Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN4.568e-7367.71Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP71_RAT4.568e-7371.50Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]
HSP7C_ICTPU7.791e-7367.86Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP74_TRYBB7.791e-7370.05Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_ONCTS7.791e-7366.52Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP72_USTMA1.018e-7268.33Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP70_LEIAM1.018e-7271.50Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665411 ID=EY665411; Name=EY665411; organism=Citrus sinensis; type=EST; length=979bp
CAATCAATAAGTAAACACTAAAGCTCGCAAATCATCCGTGCTTTTTTTCT
TTTTTTATTGTTGATAGATTCTTGATTTTGTTAATCGATGGCTGGAAAAG
GCGAAGGTCCTGCTATTGGAATTGACTTGGGCACGACTTACTCCTGTGTC
GGTGTGTGGCAACATGATCGAGTTGAGATCATCGCTAATGATCAAGGTAA
CCGAACGACGCCGTCTTATGTGGCGTTTACTGACACTGAGCGTTTGATCG
GTGACGCTGCCAAGAACCAGGTCGCCATGAACCCCACCAACACTGTTTTT
GATGCTAAGCGTTTGATTGGGAGGCGATTCAGTGATCCTTCAGTACAGAG
TGACATGAAACTATGGCCGTTCAAGGTCATTGCTGGAGCAGGTGACAAGC
CTATGATCGTTGTCAATTACAAAGGCGAAGAAGAGCAATTTTCTGCGGAA
GAAATCTCCTCAATGGTTCTTAATAAGATGAAAGAGATTGCTGAGGCTTA
TCTGGGCACTACTATTAAGAATGCTGTTGTCACAGTACCTGCTTACTTTA
ATGACTCACAGCGTCAAGCCACGAAGGACGCTGGTGTTATTTCTTNCCTT
AAATGTGATGCGTATTAATTAACGAACCCAACAGCTGCTGCTATTGCTTT
ATGGGCTGGAAAAAAAAGGCAGGAAATAACTGGGTGAAAAAAAAAGGGGC
CCCTTTTTTGAATCTGGGGGGGGGGAACTTTTGGAAGGCCCCCCCTTTTT
GACCCTTTTGAGGAAGGGTTTTTTTCCAAAATGGAAAGGCCTCCTGGGCG
GGGGGAAAACCCCCCTTTGGGGAAGGGTGAAAAAAATTTTTGAACAAACC
AAAAAGGGGGGAAAACCCCCTTTTTGTTTTCTCAGAAAAATTTTCAAAAA
AAAAGGAAAAAAAAAAACAAAAAAAAAGGGGAAAATTTTTTATATGGGGG
GAAAAAAACCCCCCCCCACACAAAAAAGC
back to top