EY665401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665401 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 4.219e-18 Identity = 49/105 (46.67%), Postives = 63/105 (60.00%), Query Frame = 3 Query: 45 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQDWCVAN---RSFGVQRIPTPKQPAEPSLVRTLLNQASSES 350 IP F CP+SLELM DPV V TGQTY+R I+ W+ GN TCP T+ L +FTL PN+ LR LI WC + + G T K + S++R L+ + SS S Sbjct: 241 IPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAGYINGRT-KNSGDMSVIRALVQRLSSRS 344
BLAST of EY665401 vs. ExPASy Swiss-Prot
Match: PUB8_ARATH (U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.039e-16 Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 3 Query: 33 LSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFT-LIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPS----LVRTLLNQASSESN 353 ++ +P FRCPISLE+M DPV + +G T+DR SI+ W+ +GN TCP+T+ PL++ LIPNH LR LI ++ A+ S P +Q S L+ TL++Q+SS ++ Sbjct: 1 MAFDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHALRSLILNF--AHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNAS 110
BLAST of EY665401 vs. ExPASy Swiss-Prot
Match: PUB27_ARATH (U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.039e-16 Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 30 DLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQDW 245 DL + +P FRCPISL++M PV++CTG TYDR SI+ W+ GN TCP T L + IPN TL+RLI+ W Sbjct: 5 DLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLIEIW 76
BLAST of EY665401 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.039e-16 Identity = 48/104 (46.15%), Postives = 63/104 (60.58%), Query Frame = 3 Query: 48 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQP--AEPSLVRTLLNQASSESN 353 P FRCPISLELM DPV V +GQTY+R I+ W+ G+ TCP T+ LT + PN+ LR LI WC +N I PK+P ++PS ++ASS S+ Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESN------GIEPPKRPNISQPS------SKASSSSS 348
BLAST of EY665401 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.357e-16 Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 3 Query: 36 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSES 350 S+ +P+ F CPI+LE+M DPV + TGQTY++ SI+ W G+ TCP TR L +L PN L+ LI WC N ++ +P E +LL +A S S Sbjct: 287 SLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSS 391
BLAST of EY665401 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.357e-16 Identity = 39/71 (54.93%), Postives = 48/71 (67.61%), Query Frame = 3 Query: 36 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQDWC 248 ++ IP F CPISLELM DP V TGQTY+R I+ W+ GN +CP T+ L +FTL PN+ LR LI WC Sbjct: 240 NLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRSLISQWC 310
BLAST of EY665401 vs. ExPASy Swiss-Prot
Match: PUB17_ARATH (U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.773e-16 Identity = 45/109 (41.28%), Postives = 62/109 (56.88%), Query Frame = 3 Query: 30 DLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQDWCVANR-SFGVQRIPTPKQPAEPSLVRTLLNQASSESN 353 D + +P F CPISL+LM DPV + TGQTYDR SI W+ G+ TCP T L D ++PN L+ LI WC A+ S+ + +P + S L +A+ E+N Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNE----SFASALPTKAAVEAN 404
BLAST of EY665401 vs. ExPASy Swiss-Prot
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 2.315e-16 Identity = 39/74 (52.70%), Postives = 50/74 (67.57%), Query Frame = 3 Query: 39 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQDWCVANR 260 + IP +FRCP+S ELM DPV V +GQT+DR SI+ W+ G CP TR LT LIPN+T++ +I W ANR Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVKAMIASWLEANR 309
BLAST of EY665401 vs. ExPASy Swiss-Prot
Match: PUB16_ARATH (U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.023e-16 Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 3 Query: 45 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQDWC 248 IP FRCPI+LELM DPV V TGQTYDR SI+ W+ +G+ TCP T L +L+PN L+ LI WC Sbjct: 274 IPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVLWC 341
BLAST of EY665401 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.736e-16 Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 3 Query: 45 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQDWCVAN 257 IP +FRCPISLELM DPV V TGQTY+R SI+ W+ G+ TCP ++ L L PN+ L+ LI WC +N Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESN 318 The following BLAST results are available for this feature:
BLAST of EY665401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665401 ID=EY665401; Name=EY665401; organism=Citrus sinensis; type=EST; length=984bpback to top |