CV884662

Overview
NameCV884662
Unique NameCV884662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_YERPS (Probable manganese transport protein mntH OS=Yersinia pseudotuberculosis GN=mntH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22
Identity = 44/96 (45.83%), Postives = 70/96 (72.92%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +IA++DPGN   ++Q+GA  GY+LLW+++WA +M +L+QLLSA++G+ATG++LAE  R+ +P    +  W  AE+ ++  D  E IG+AI
Sbjct:   23 GPAFIAAIAYIDPGNFATNIQAGATFGYTLLWVVVWANVMAMLVQLLSAKLGIATGKNLAEHIRDRFPRPVVWAYWVQAEIIVMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_YERPP (Probable manganese transport protein mntH OS=Yersinia pestis (strain Pestoides F) GN=mntH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22
Identity = 44/96 (45.83%), Postives = 70/96 (72.92%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +IA++DPGN   ++Q+GA  GY+LLW+++WA +M +L+QLLSA++G+ATG++LAE  R+ +P    +  W  AE+ ++  D  E IG+AI
Sbjct:   23 GPAFIAAIAYIDPGNFATNIQAGATFGYTLLWVVVWANVMAMLVQLLSAKLGIATGKNLAEHIRDRFPRPVVWAYWVQAEIIVMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_YERPN (Probable manganese transport protein mntH OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mntH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22
Identity = 44/96 (45.83%), Postives = 70/96 (72.92%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +IA++DPGN   ++Q+GA  GY+LLW+++WA +M +L+QLLSA++G+ATG++LAE  R+ +P    +  W  AE+ ++  D  E IG+AI
Sbjct:   23 GPAFIAAIAYIDPGNFATNIQAGATFGYTLLWVVVWANVMAMLVQLLSAKLGIATGKNLAEHIRDRFPRPVVWAYWVQAEIIVMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_YERPE (Probable manganese transport protein mntH OS=Yersinia pestis GN=mntH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22
Identity = 44/96 (45.83%), Postives = 70/96 (72.92%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +IA++DPGN   ++Q+GA  GY+LLW+++WA +M +L+QLLSA++G+ATG++LAE  R+ +P    +  W  AE+ ++  D  E IG+AI
Sbjct:   23 GPAFIAAIAYIDPGNFATNIQAGATFGYTLLWVVVWANVMAMLVQLLSAKLGIATGKNLAEHIRDRFPRPVVWAYWVQAEIIVMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_YERPB (Probable manganese transport protein mntH OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mntH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22
Identity = 44/96 (45.83%), Postives = 70/96 (72.92%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +IA++DPGN   ++Q+GA  GY+LLW+++WA +M +L+QLLSA++G+ATG++LAE  R+ +P    +  W  AE+ ++  D  E IG+AI
Sbjct:   23 GPAFIAAIAYIDPGNFATNIQAGATFGYTLLWVVVWANVMAMLVQLLSAKLGIATGKNLAEHIRDRFPRPVVWAYWVQAEIIVMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_YERPA (Probable manganese transport protein mntH OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mntH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22
Identity = 44/96 (45.83%), Postives = 70/96 (72.92%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +IA++DPGN   ++Q+GA  GY+LLW+++WA +M +L+QLLSA++G+ATG++LAE  R+ +P    +  W  AE+ ++  D  E IG+AI
Sbjct:   23 GPAFIAAIAYIDPGNFATNIQAGATFGYTLLWVVVWANVMAMLVQLLSAKLGIATGKNLAEHIRDRFPRPVVWAYWVQAEIIVMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_YERP3 (Probable manganese transport protein mntH OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mntH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22
Identity = 44/96 (45.83%), Postives = 70/96 (72.92%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +IA++DPGN   ++Q+GA  GY+LLW+++WA +M +L+QLLSA++G+ATG++LAE  R+ +P    +  W  AE+ ++  D  E IG+AI
Sbjct:   23 GPAFIAAIAYIDPGNFATNIQAGATFGYTLLWVVVWANVMAMLVQLLSAKLGIATGKNLAEHIRDRFPRPVVWAYWVQAEIIVMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_YERE8 (Probable manganese transport protein mntH OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=mntH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22
Identity = 48/109 (44.04%), Postives = 75/109 (68.81%), Query Frame = 2 
Query:  290 PPFSWKKLWL-FTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            PP + +++ L   GP F+ +I ++DPGN   ++Q+GA  GY+LLW+++WA  M +LIQLLSA++G+ATG++LAE  R+ +P  A +  W  AE+  +  D  E IG+AI
Sbjct:   10 PPRTSRRIKLSLMGPAFIAAIGYIDPGNFATNIQAGASFGYTLLWVVVWANFMAMLIQLLSAKLGIATGKNLAEHIRDRFPRPAVWAYWVQAEIIAMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_RALSO (Probable manganese transport protein mntH OS=Ralstonia solanacearum GN=mntH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22
Identity = 47/105 (44.76%), Postives = 74/105 (70.48%), Query Frame = 2 
Query:  302 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIA 616
            WKKL  F GPG L+S+ ++DPGN   D+++G+  GYSLL++++ ++L  +++Q LSAR+G+ TG+ LA L RE Y   A  V W +AE++++  D  EV+G A+A
Sbjct:   33 WKKLLRFAGPGLLVSVGYMDPGNWATDIEAGSRYGYSLLFVVLLSSLAAMVLQCLSARLGIVTGKDLARLSRERYRPGAVRVQWLLAELSIVACDLAEVLGCALA 137
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_BLOPB (Probable manganese transport protein mntH OS=Blochmannia pennsylvanicus (strain BPEN) GN=mntH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22
Identity = 44/96 (45.83%), Postives = 69/96 (71.88%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA +M +LIQLLSA++G+ATG++LAE  R+++P    ++ W  AE+  +  D  E IG+AI
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGATFGYQLLWVVVWANIMAMLIQLLSAKLGIATGKNLAEHIRDQFPRSVVWMYWIQAEIIAMATDLAEFIGAAI 118
The following BLAST results are available for this feature:
BLAST of CV884662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MNTH_YERPS4.905e-2245.83Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERPP4.905e-2245.83Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERPN4.905e-2245.83Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERPE4.905e-2245.83Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERPB4.905e-2245.83Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERPA4.905e-2245.83Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERP34.905e-2245.83Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_YERE84.905e-2244.04Probable manganese transport protein mntH OS=Yersi... [more]
MNTH_RALSO4.905e-2244.76Probable manganese transport protein mntH OS=Ralst... [more]
MNTH_BLOPB4.905e-2245.83Probable manganese transport protein mntH OS=Bloch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008G10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884662 ID=CV884662; Name=CV884662; organism=Citrus sinensis; type=EST; length=619bp
GACCGTTTTCACCAGTCCTCAGAGGTGAGATCTGTGGAACAGAATCTACT
GCCGAGTTTGGAATATTCCGTGCGTAGATAAAACAAAGAAAGTGAAAATG
GACTCCTCCGAAACCCGAGAAGAAGAAAGCGGGTCCAAAGACAGCAATGA
AACCAACCGCCTCCTTCCAATACCGTCACCACCGTCCTCAACGGAGGACG
ACGAGGAAGTCGCGTTCGATTCACGAGAGAAAATCTTGATCGTCGACGCA
GATTCAGCCTCCACGTTGAACGTTGACGGTGACCAAGTGCCGCCTTTTTC
GTGGAAAAAGCTTTGGTTATTCACTGGACCCGGTTTCTTAATGAGCATAG
CGTTTCTGGATCCGGGGAATCTGGAGGGGGATCTCCAATCGGGGGCGATA
GCAGGGTACTCGCTTCTTTGGTTGCTAATGTGGGCCACCCTCATGGGCTT
GCTTATTCAGCTGCTGTCGGCACGAGTAGGGGTGGCCACGGGGCGTCACT
TGGCAGAGCTGTGTAGAGAGGAGTACCCCAATTGGGCGCGATTCGTGTTG
TGGTTCATGGCTGAAGTGGCCTTGATTGGTGCCGATTTTCAGGAAGTAAT
TGGGAGTGCCATTGCTATC
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