CV884662

Overview
NameCV884662
Unique NameCV884662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_ECO7I (Manganese transport protein mntH OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.366e-22
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D  E IG+AI
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_ECO5E (Manganese transport protein mntH OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.366e-22
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D  E IG+AI
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_ECO57 (Manganese transport protein mntH OS=Escherichia coli O157:H7 GN=mntH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.366e-22
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D  E IG+AI
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_ECO55 (Manganese transport protein mntH OS=Escherichia coli (strain 55989 / EAEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.366e-22
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D  E IG+AI
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_ECO45 (Manganese transport protein mntH OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.366e-22
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D  E IG+AI
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_ECO24 (Manganese transport protein mntH OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.366e-22
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D  E IG+AI
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_ENTS8 (Probable manganese transport protein mntH OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mntH PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.093e-21
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D  E IG+AI
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQVLSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_ENT38 (Probable manganese transport protein mntH OS=Enterobacter sp. (strain 638) GN=mntH PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.093e-21
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D  E IG+AI
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYKLLWVVVWANLMAMLIQVLSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAI 118
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_VIBHB (Probable manganese transport protein mntH OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=mntH PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.427e-21
Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = 2 
Query:  305 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPN-WARFVLWFMAEVALIGADFQEVIGSAI 613
            K+  +  GP F+ +I ++DPGN   +++SG+  GY LLW+++WA LM +LIQ LSA++G+ TG++LAE  R+  PN WA    W  AE+  I  D  E IG+A+
Sbjct:   28 KRKLMMLGPAFIAAIGYIDPGNFATNIESGSSFGYQLLWVVLWANLMAMLIQYLSAKLGIVTGKNLAEHLRDHLPNKWAVGFYWIQAEIIAIATDLAEFIGAAV 131
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_KLEP7 (Probable manganese transport protein mntH OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mntH PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.427e-21
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 2 
Query:  326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D  E IG+AI
Sbjct:   23 GPAFVAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQVLSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAI 118
The following BLAST results are available for this feature:
BLAST of CV884662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MNTH_ECO7I8.366e-2246.88Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECO5E8.366e-2246.88Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECO578.366e-2246.88Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECO558.366e-2246.88Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECO458.366e-2246.88Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECO248.366e-2246.88Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ENTS81.093e-2146.88Probable manganese transport protein mntH OS=Enter... [more]
MNTH_ENT381.093e-2146.88Probable manganese transport protein mntH OS=Enter... [more]
MNTH_VIBHB1.427e-2144.23Probable manganese transport protein mntH OS=Vibri... [more]
MNTH_KLEP71.427e-2146.88Probable manganese transport protein mntH OS=Klebs... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008G10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884662 ID=CV884662; Name=CV884662; organism=Citrus sinensis; type=EST; length=619bp
GACCGTTTTCACCAGTCCTCAGAGGTGAGATCTGTGGAACAGAATCTACT
GCCGAGTTTGGAATATTCCGTGCGTAGATAAAACAAAGAAAGTGAAAATG
GACTCCTCCGAAACCCGAGAAGAAGAAAGCGGGTCCAAAGACAGCAATGA
AACCAACCGCCTCCTTCCAATACCGTCACCACCGTCCTCAACGGAGGACG
ACGAGGAAGTCGCGTTCGATTCACGAGAGAAAATCTTGATCGTCGACGCA
GATTCAGCCTCCACGTTGAACGTTGACGGTGACCAAGTGCCGCCTTTTTC
GTGGAAAAAGCTTTGGTTATTCACTGGACCCGGTTTCTTAATGAGCATAG
CGTTTCTGGATCCGGGGAATCTGGAGGGGGATCTCCAATCGGGGGCGATA
GCAGGGTACTCGCTTCTTTGGTTGCTAATGTGGGCCACCCTCATGGGCTT
GCTTATTCAGCTGCTGTCGGCACGAGTAGGGGTGGCCACGGGGCGTCACT
TGGCAGAGCTGTGTAGAGAGGAGTACCCCAATTGGGCGCGATTCGTGTTG
TGGTTCATGGCTGAAGTGGCCTTGATTGGTGCCGATTTTCAGGAAGTAAT
TGGGAGTGCCATTGCTATC
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