CV884652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884652 vs. ExPASy Swiss-Prot
Match: RL19_PYRFU (50S ribosomal protein L19e OS=Pyrococcus furiosus GN=rpl19e PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.485e-26 Identity = 55/138 (39.86%), Postives = 86/138 (62.32%), Query Frame = 1 Query: 34 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVL 447 M +LK+Q+R++A +LKCG ++W+DP +++++ A +R++I++L+K+G I +KP K SR RA+ E K+KGRH G G RKG + AR+ K K + KKID+ Y +Y++ KG FKNK L Sbjct: 1 MNTLKMQRRIAAEILKCGENRIWIDPERIDDVASAITREDIKRLIKEGVIKKKPIKGQSRYRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
BLAST of CV884652 vs. ExPASy Swiss-Prot
Match: RL19_MAIZE (60S ribosomal protein L19 (Fragment) OS=Zea mays GN=RPL19 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.069e-24 Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = 1 Query: 43 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARR 228 LKLQKRL+AS LKCG+GKVWLDPNEV+EISMANSRQNIRKLVKDGFII+KP KIHSRSR ++ Sbjct: 1 LKLQKRLAASYLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKIHSRSRCKK 62
BLAST of CV884652 vs. ExPASy Swiss-Prot
Match: RL19_ARCFU (50S ribosomal protein L19e OS=Archaeoglobus fulgidus GN=rpl19e PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.681e-22 Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 34 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKN 435 ++ L LQ+RL+ASVLKCG +VW DP + +I+ A ++Q+IR+L++ G I RKP SR+R + K KRKGR G+G RKG + AR+P K + + +D+ Y +Y K KG F++ Sbjct: 3 VMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRILYRKAKGGEFRS 136
BLAST of CV884652 vs. ExPASy Swiss-Prot
Match: RL19_METJA (50S ribosomal protein L19e OS=Methanocaldococcus jannaschii GN=rpl19e PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.819e-21 Identity = 47/135 (34.81%), Postives = 81/135 (60.00%), Query Frame = 1 Query: 34 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNK 438 ++ + +Q+R++A +LKCG +VW+DP +++ + MA S+ +IR L+K+G I +K K S +R +++KE ++KGR G G R+G AR P K + R+S KID+ +Y +Y KG F+++ Sbjct: 3 IMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSR 137
BLAST of CV884652 vs. ExPASy Swiss-Prot
Match: RL19_METTH (50S ribosomal protein L19e OS=Methanobacterium thermoautotrophicum GN=rpl19e PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.071e-20 Identity = 48/134 (35.82%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 37 VSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNK 438 ++L QKRL+A +LK G ++W+DP ++E+S A +R +++L+KDG I KP K S R++++ + K+KGR G G KG + AR P K + R++++I+K Y +Y KG FK+K Sbjct: 1 MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSK 134
BLAST of CV884652 vs. ExPASy Swiss-Prot
Match: RL19_METVA (50S ribosomal protein L19e OS=Methanococcus vannielii GN=rpl19e PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.944e-20 Identity = 45/134 (33.58%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 37 VSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNK 438 + + Q+R++A+VL CG +VW+DP + ++ MA ++ +IR L+ DG I++K K S +R + ++E KRKG+ G G R+G + AR P K + RE++KI++ Y +Y KG F+++ Sbjct: 1 MDVSTQRRIAAAVLDCGIDRVWVDPENLEKVKMAITKDDIRLLINDGIIVKKQEKGISSARKKEVQEQKRKGKRKGPGSRRGAKGARTPKKEKWMNTIRPLRTLLKELRENEKIERSSYRKLYRMAKGGAFRSR 134
BLAST of CV884652 vs. ExPASy Swiss-Prot
Match: RL19_HALMA (50S ribosomal protein L19e OS=Haloarcula marismortui GN=rpl19e PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14 Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = 1 Query: 34 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVF 429 M L QKRL+A VL G+ +VW +P +I+ A +R+++R+LV +G I K K +SR RAR ++ + G G G RKG AR +K + R+ + Y D+Y K G F Sbjct: 1 MTDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEF 132
BLAST of CV884652 vs. ExPASy Swiss-Prot
Match: RL19E_HALSA (50S ribosomal protein L19e OS=Halobacterium salinarium GN=rpl19e PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14 Identity = 48/145 (33.10%), Postives = 69/145 (47.59%), Query Frame = 1 Query: 34 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKS 468 M L QKRL+A VL G +VW DP+ +EI+ A +R++IR+LV DG I + T+ +SR RAR + G G G RKG AR K + R+ + Y +MY G F + R L + ++ Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSRGRARERDAKESYGHKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQYREMYNMANGGEFDSVRRLTNYVEEN 145
BLAST of CV884652 vs. ExPASy Swiss-Prot
Match: RL19_SULAC (50S ribosomal protein L19e OS=Sulfolobus acidocaldarius GN=rpl19e PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.074e-12 Identity = 47/149 (31.54%), Postives = 71/149 (47.65%), Query Frame = 1 Query: 34 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKR-KGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKN----KRVLMESIHK 465 M +LQ+RL+A + G + +P + E+ A +R++I+KL+K+ +I P + S R + K +R KG +G RKG AR K R++ IDKH Y +Y + KGN FKN K L + HK Sbjct: 1 MPEFQLQRRLAADIAGVGLNNIKFNPERLEEVEEALTREDIKKLIKERAVIVNPKRGISSGRLKERKHKRRSKGEGRKHGSRKGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVIDKHTYRLLYKRAKGNYFKNLSDVKSYLRQMGHK 149
BLAST of CV884652 vs. ExPASy Swiss-Prot
Match: RL19_AERPE (50S ribosomal protein L19e OS=Aeropyrum pernix GN=rpl19e PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.551e-11 Identity = 41/132 (31.06%), Postives = 65/132 (49.24%), Query Frame = 1 Query: 46 KLQKRLSASVLKCGRGKVWL--DPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKN 435 + Q+RL+A +L G ++W+ DP EI A ++ ++R L+K G I P K ++ ++ +RKGR G G+RKG ARL K R+ + ID+ Y +YM KG F++ Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKGGTFRD 135 The following BLAST results are available for this feature:
BLAST of CV884652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884652 ID=CV884652; Name=CV884652; organism=Citrus sinensis; type=EST; length=777bpback to top |