EY665182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: RH27_ORYSJ (DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica GN=Os03g0802700 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 5.028e-57 Identity = 119/193 (61.66%), Postives = 147/193 (76.17%), Query Frame = 1 Query: 1 EDLARLSFQ------TTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPSIF*RAGKNPLVKKIMN 561 ++ A+LSF+ + PVY+ VDD T T EGLQQGYCV+ SA+RF++LY+FLK+ +KKVMVFFSSCNSVKFH+ELL ++Q++C DIHGKQKQQKRTTTFF+FCKAEKGILLCT+VAARGLDIP VD+IVQYDPPDEPK+ Y TA +KG KG A LFL + L F I+ +A K L + + N Sbjct: 289 KEFAKLSFEKNEESTSKPVYVGVDDAETNATVEGLQQGYCVIDSARRFLVLYAFLKKKQNKKVMVFFSSCNSVKFHAELLNFLQIECSDIHGKQKQQKRTTTFFNFCKAEKGILLCTNVAARGLDIPDVDFIVQYDPPDEPKD-YIHRVGRTARGEKG-KGEALLFL-LPQELKF-LIYLKAAKISLTELVFN 477
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: RH51_ARATH (DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana GN=RH51 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 3.051e-54 Identity = 118/199 (59.30%), Postives = 146/199 (73.37%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPSIF*RAGKNPLVKKIMNFEPKKTGSKVQS 597 +DLAR+S T+PV++DVDDGR KVTNEGL+QGYCVVPS +R ILL SFLK+NL+KK+MVFFS+C SV+FH+E+++ VD DIHG Q +RT TFFDF KA+KGILLCTDVAARGLDIP+VDWI+QYDPPD+P E VG +GAKG A L L + L F + +A K P+ K + F K+ S VQS Sbjct: 282 KDLARVSL-TSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFLKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHR--VGRTARGEGAKGKALLVL-IPEELQFIR-YLKAAKVPV--KELEFNEKRL-SNVQS 472
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX18_DICDI (Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium discoideum GN=ddx18 PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.085e-51 Identity = 98/161 (60.87%), Postives = 124/161 (77.02%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483 +D+A++S +PVY+ VDD R T EGL+QGY V PS +RF+LLY+FLK+NLSKK++VF SSCN+VK+ +ELL YI + ++HG+QKQQKRT TF++F AEKGIL+CTDVAARGLDIP+VDWI+QYDPPD+PKE VG G KG A LFL Sbjct: 312 DDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPSERRFLLLYTFLKKNLSKKIIVFLSSCNAVKYTAELLNYIDIPVLELHGRQKQQKRTNTFYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHR--VGRTARGVGKKGRALLFL 470
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_SCHPO (ATP-dependent RNA helicase has1 OS=Schizosaccharomyces pombe GN=has1 PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.851e-51 Identity = 103/161 (63.98%), Postives = 125/161 (77.64%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483 EDLAR+S + P+Y++VD G+ T EGL+QGY VV S KRF+LL+SFLKRNL KKV+VF SSC SVK+ +ELL YI + D+HGKQKQQ+RT TFF+FC AEKGILLCT+VAARGLDIPAVDWIVQYDPPD+P++ Y TA KG G + +FL Sbjct: 283 EDLARISLKPGPLYVNVDSGKPTSTVEGLEQGYVVVDSDKRFLLLFSFLKRNLKKKVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRD-YIHRVGRTARGTKGT-GKSLMFL 441
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX18_MOUSE (ATP-dependent RNA helicase DDX18 OS=Mus musculus GN=Ddx18 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 4.123e-51 Identity = 95/137 (69.34%), Postives = 110/137 (80.29%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE 411 EDLAR+S + P+Y+ VDD + T +GL+QGY V PS KRF+LL++FLK+N KKVMVFFSSC SVK+H ELL YI + IHGKQKQ KRTTTFF FC A+ GILLCTDVAARGLDIP VDWIVQYDPPD+PKE Sbjct: 362 EDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKE 498
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_NEUCR (ATP-dependent RNA helicase has-1 OS=Neurospora crassa GN=has-1 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 9.185e-51 Identity = 115/230 (50.00%), Postives = 149/230 (64.78%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPSIF*RAGKNPLVKKIMNFEPKKTGSKVQSPSGEKIGLANTYLILKPTPPKNGVTHFLFPY 690 EDLAR+S + P+Y++VD+ + T EGL QGY VV + KRF+LL+SFLK+ KKV+VFFSSCNSVK++SELL+YI + D+HGKQKQQKRT TFF+FC A++G L+CTDVAARGLDIPAVDWIVQ+DPPD+P++ VG KG + LFL + + +A K P+V+ PK VQS + IG N YL K+G +L Y Sbjct: 300 EDLARISLRPGPLYVNVDEEKQFSTVEGLDQGYVVVDADKRFLLLFSFLKKMQKKKVIVFFSSCNSVKYYSELLQYIDLQVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHR--VGRTARGNNTKGRSLLFLQPNELGFLAHL--KAAKVPVVEYDF---PKSKILNVQSQLEKLIG-QNYYL---NQSAKDGYRSYLHAY 518
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_COCIM (ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis GN=HAS1 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 9.185e-51 Identity = 96/161 (59.63%), Postives = 122/161 (75.78%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483 EDLAR+S + P+YI+VD + T EGL+QGY + S KRF+LL+SFLKRNL KK++VFFSSCN VK+H+ELL YI + D+HGKQKQQKRT TFF+FC A++G L+CTDVAARGLDIPAVDWI+Q+DPPD+P++ VG KG + +FL Sbjct: 318 EDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICDSDKRFLLLFSFLKRNLKKKIIVFFSSCNCVKYHAELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHR--VGRTARGANGKGRSLMFL 476
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX18_HUMAN (ATP-dependent RNA helicase DDX18 OS=Homo sapiens GN=DDX18 PE=1 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 1.567e-50 Identity = 93/137 (67.88%), Postives = 109/137 (79.56%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE 411 EDLAR+S + P+Y+ VDD + T +GL+QGY V PS KRF+LL++FLK+N KK+MVFFSSC SVK+H ELL YI + IHGKQKQ KRTTTFF FC A+ G LLCTDVAARGLDIP VDWIVQYDPPD+PKE Sbjct: 372 EDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKE 508
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_NEOFI (ATP-dependent RNA helicase has1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=has1 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 2.046e-50 Identity = 95/161 (59.01%), Postives = 123/161 (76.40%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483 EDLAR+S + P+YI+VD + T EGL+QGY + + KRF+LL+SFLKRNL KK++VFFSSCN VK+H+ELL YI + ++HGKQKQQKRT TFF+FC A++G L+CTDVAARGLDIPAVDWI+Q+DPPD+P++ VG AKG + +FL Sbjct: 334 EDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKIIVFFSSCNCVKYHAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHR--VGRTARGANAKGRSLMFL 492
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_ASPFU (ATP-dependent RNA helicase has1 OS=Aspergillus fumigatus GN=has1 PE=3 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 2.046e-50 Identity = 95/161 (59.01%), Postives = 123/161 (76.40%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483 EDLAR+S + P+YI+VD + T EGL+QGY + + KRF+LL+SFLKRNL KK++VFFSSCN VK+H+ELL YI + ++HGKQKQQKRT TFF+FC A++G L+CTDVAARGLDIPAVDWI+Q+DPPD+P++ VG AKG + +FL Sbjct: 334 EDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKIIVFFSSCNCVKYHAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHR--VGRTARGTNAKGRSLMFL 492 The following BLAST results are available for this feature:
BLAST of EY665182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665182 ID=EY665182; Name=EY665182; organism=Citrus sinensis; type=EST; length=1045bpback to top |