EY665182

Overview
NameEY665182
Unique NameEY665182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1045
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_ASPCL (ATP-dependent RNA helicase has1 OS=Aspergillus clavatus GN=has1 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 2.046e-50
Identity = 95/161 (59.01%), Postives = 123/161 (76.40%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            EDLAR+S +  P+YI+VD  +   T EGL+QGY +  + KRF+LL+SFLKRNL KK++VFFSSCN VK+H+ELL YI +   ++HGKQKQQKRT TFF+FC A++G L+CTDVAARGLDIPAVDWI+Q+DPPD+P++      VG       AKG + +FL
Sbjct:  337 EDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKIIVFFSSCNCVKYHAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHR--VGRTARGANAKGRSLMFL 495          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_KLULA (ATP-dependent RNA helicase HAS1 OS=Kluyveromyces lactis GN=HAS1 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 7.776e-50
Identity = 98/161 (60.87%), Postives = 125/161 (77.64%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            EDLAR+S +  P++I+VD  +   T +GL+QGY V  S KRF+LL+SFLKRN  KKV+VF SSCNSVK+++ELL YI +   ++HGKQKQQKRT TFF+FC AE+GIL+CTDVAARGLDIPAVDWI+Q+DPPD+P++ Y      TA   KG KG + +FL
Sbjct:  228 EDLARISLRPGPLFINVDSEKDTSTADGLEQGYVVCESDKRFLLLFSFLKRNQKKKVIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRD-YIHRVGRTARGTKG-KGKSLMFL 386          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: RH51_ORYSJ (Putative DEAD-box ATP-dependent RNA helicase 51 OS=Oryza sativa subsp. japonica GN=Os06g0535100 PE=3 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 1.016e-49
Identity = 103/169 (60.95%), Postives = 128/169 (75.74%), Query Frame = 1
Query:    1 EDLARLSF------QTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKK--VMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            ED A+L+F      Q T VY+ VDD  +K T EGL+QGYCV+PS +RF++LY+FLK+ LS+K  VMVFFSSCNSVKFH++LL +IQ++C+DIHG+ KQ +RT+TFF F KAE GILLCT+VAARGLDIP VD+IVQYDPPDE K+      VG        KG+A LFL
Sbjct:  280 EDFAKLTFGSKEERQRTLVYVGVDDHESKATVEGLKQGYCVIPSERRFLVLYAFLKKALSEKTKVMVFFSSCNSVKFHAQLLNFIQIECYDIHGQLKQHQRTSTFFKFHKAEHGILLCTNVAARGLDIPDVDYIVQYDPPDETKDYIHR--VGRTARGDNGKGSAILFL 446          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_EMENI (ATP-dependent RNA helicase has1 OS=Emericella nidulans GN=has1 PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.326e-49
Identity = 88/137 (64.23%), Postives = 114/137 (83.21%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE 411
            EDLAR+S +  P+YI+VD  +   T EGL+QGY +  + KRF+LL+SFLKRNL KK++VFFSSCN VK+H+ELL YI +   D+HGKQKQQKRT TFF+FC A++G+L+CTDVAARGLDIPAVDWI+Q+DPPD+ ++
Sbjct:  322 EDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKIIVFFSSCNCVKYHAELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGVLICTDVAARGLDIPAVDWIIQFDPPDDTRD 458          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_ASPOR (ATP-dependent RNA helicase has1 OS=Aspergillus oryzae GN=has1 PE=3 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 1.326e-49
Identity = 94/161 (58.39%), Postives = 121/161 (75.16%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            EDLAR+S +  P+YI+VD  +   T EGL+QGY +  + KRF+LL+SFLKRNL KK++VF SSCNSVK++ ELL YI +   D+HGKQKQQKRT TFF+FC A++G L+CTDVAARGLDIPAVDWI+Q+DPPD+P++      VG        KG + +FL
Sbjct:  313 EDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKIIVFLSSCNSVKYYGELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHR--VGRTARGSNGKGRSLMFL 471          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_LODEL (ATP-dependent RNA helicase HAS1 OS=Lodderomyces elongisporus GN=HAS1 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.732e-49
Identity = 96/161 (59.63%), Postives = 122/161 (75.78%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            EDLAR+S +  P+YI+V   +   T +GL+QGY V  S KRF+LL+SFLKRN+ KK++VF SSCNSVKF+SELL YI +   D+HGKQKQQKRT TFF+FC A++GIL+CTDVAARGLDIPAVDWI+Q+DPPD+P++      VG        KG + +FL
Sbjct:  287 EDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNIKKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHR--VGRTARGTDGKGKSLMFL 445          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_CANAL (ATP-dependent RNA helicase HAS1 OS=Candida albicans GN=HAS1 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.732e-49
Identity = 99/161 (61.49%), Postives = 125/161 (77.64%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            EDLAR+S +  P+YI+V   +   T +GL+QGY V  S KRF+LL+SFLKRN+ KK++VF SSCNSVKF+SELL YI +   D+HGKQKQQKRT TFF+FC A++GIL+CTDVAARGLDIPAVDWIVQ+DPPD+P++ Y      TA   +G KG + +FL
Sbjct:  301 EDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNVKKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRD-YIHRVGRTARGTQG-KGKSLMFL 459          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_CHAGB (ATP-dependent RNA helicase HAS1 OS=Chaetomium globosum GN=HAS1 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.262e-49
Identity = 112/230 (48.70%), Postives = 148/230 (64.35%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPSIF*RAGKNPLVKKIMNFEPKKTGSKVQSPSGEKIGLANTYLILKPTPPKNGVTHFLFPY 690
            EDLAR+S +  P+YI+VD+ +   T EGL QGY +V + KRF+LL+SFLK+   KK++VF SSCNSVK++SELL+YI +   D+HGKQKQQKRT TFF+FC A++G L+CTDVAARGLDIP VDWIVQ+DPPD+P++      VG        KG + LFL   +      +  +A K P+V+      PK     VQS   + IG +N YL       K+G   +L  Y
Sbjct:  305 EDLARISLRPGPLYINVDEEKQFSTVEGLDQGYVIVDADKRFLLLFSFLKKMAKKKIIVFLSSCNSVKYYSELLQYIDLQVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPQVDWIVQFDPPDDPRDYIHR--VGRTARGNNTKGRSLLFLQPCELGFLAHL--KAAKVPVVEYDF---PKNKILNVQSQLEKLIG-SNYYL---NQSAKDGYRSYLHAY 523          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: RH27_ARATH (DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana GN=RH27 PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.955e-49
Identity = 112/193 (58.03%), Postives = 133/193 (68.91%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKR-NLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPSIF*RAGKNPLVKKIMNFEPKK 576
            EDLAR+S  T+PVYIDVD+GR +VTNEGL+QGYCVVPSA R + L +FLKR    KK+MVFFS+C S KFH+EL RYI+ DC +I G   Q KRT TF  F KAE GILLCT+VAARGLD P VDWIVQYDPPD P +      VG     +GAKG A L L + + L F   + +A K P+ +    FE KK
Sbjct:  347 EDLARVSL-TSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHR--VGRTARGEGAKGKALLVL-TPQELKFIQ-YLKAAKIPVEEH--EFEEKK 532          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_GIBZE (ATP-dependent RNA helicase HAS1 OS=Gibberella zeae GN=HAS1 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.955e-49
Identity = 109/212 (51.42%), Postives = 144/212 (67.92%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPSIF*RAGKNPLVKKIMNFEPKKTGSKVQSPSGEKIGLANTYL 636
            EDLAR+S +  P+YI+VD+ +   T EGL+QGY +  +  RF+LL+SFLKRNL KK++VFFSSC  VK+H+ELL YI +   D+HGKQKQQKRT TFF+FC A++G L+CTDVAARGLDIP+VDWI+Q+DPPD+P++      VG        KG + +FL   + L F S   +A + P+ +   NF  KK    VQS   EK+   N YL
Sbjct:  308 EDLARISLRPGPLYINVDEEKQYSTVEGLEQGYIICETDMRFLLLFSFLKRNLKKKIIVFFSSCACVKYHAELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPSVDWIIQFDPPDDPRDYIHR--VGRTARGSNNKGRSLMFLQPNE-LGFLSHL-KAARVPVAE--FNFPTKKI-INVQSQL-EKLISQNYYL 511          
The following BLAST results are available for this feature:
BLAST of EY665182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
HAS1_ASPCL2.046e-5059.01ATP-dependent RNA helicase has1 OS=Aspergillus cla... [more]
HAS1_KLULA7.776e-5060.87ATP-dependent RNA helicase HAS1 OS=Kluyveromyces l... [more]
RH51_ORYSJ1.016e-4960.95Putative DEAD-box ATP-dependent RNA helicase 51 OS... [more]
HAS1_EMENI1.326e-4964.23ATP-dependent RNA helicase has1 OS=Emericella nidu... [more]
HAS1_ASPOR1.326e-4958.39ATP-dependent RNA helicase has1 OS=Aspergillus ory... [more]
HAS1_LODEL1.732e-4959.63ATP-dependent RNA helicase HAS1 OS=Lodderomyces el... [more]
HAS1_CANAL1.732e-4961.49ATP-dependent RNA helicase HAS1 OS=Candida albican... [more]
HAS1_CHAGB2.262e-4948.70ATP-dependent RNA helicase HAS1 OS=Chaetomium glob... [more]
RH27_ARATH2.955e-4958.03DEAD-box ATP-dependent RNA helicase 27 OS=Arabidop... [more]
HAS1_GIBZE2.955e-4951.42ATP-dependent RNA helicase HAS1 OS=Gibberella zeae... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-A02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665182 ID=EY665182; Name=EY665182; organism=Citrus sinensis; type=EST; length=1045bp
GAGGATCTTGCTCGCTTGTCATTTCAGACAACTCCAGTTTATATTGATGT
GGATGATGGGAGAACTAAGGTCACCAACGAAGGCCTGCAGCAAGGCTATT
GTGTGGTGCCCAGTGCCAAGAGATTTATCCTTCTATATTCCTTCTTGAAG
AGGAATCTGTCAAAGAAAGTGATGGTCTTCTTCTCCTCGTGTAATTCAGT
CAAATTTCATTCAGAACTTCTCAGATATATTCAGGTGGATTGCTTTGATA
TCCATGGAAAGCAAAAGCAACAGAAACGAACCACTACCTTCTTTGACTTC
TGCAAGGCGGAGAAGGGCATCTTGTTGTGTACTGATGTAGCTGCCCGTGG
ACTTGACATTCCTGCTGTGGACTGGATTGTGCAGTATGATCCTCCTGATG
AACCCAAGGAATAATATTCTTCGGGTGGGGTCGGGACAGCCCCGTGGAAG
AAAGGTGCAAAAGGAAATGCCCCACTTTTTCTTGATTCCAGAAAGAATTT
ACATTTTCCTTCCATATTCTGAAGGGCTGGCAAAAATCCCCTGGTTAAAA
AAATTATGAATTTTGAACCAAAAAAAACTGGGTCTAAGGTGCAGTCCCCT
TCCGGGGAAAAAATTGGGTTGGCTAACACCTATTTAATTTTGAAACCAAC
CCCCCCTAAAAATGGCGTTACGCATTTTTTATTTCCATACCAATAGATTT
CCCCACCCCCTAAGAAAGAATAAATCTTCCAAGGTATACCCCCCCCTATT
GATTTGGAAGGGGGAACCCGCCCTCGTTTTTATTTATTGTTTTTTTTTCT
CCCCCCCCCCCTAGAGGGGGAAAAATCCAAACACATAGAAAACCACGCTG
GTCCCCTCTTATAATTTTTTAAAAAAATAAAAAACCACCCCAAAAAAACT
CACACAAAAGAGAACACAAAAACAAATTGGTTTTTTTCTCATTGAAAACA
CTCCACCCCCCTTTTTATTGGAGTGGTAGGAAACAGAAGAAAGAATAATA
AAAAATAAAAATAAAAATACACACCCCCCCCACTTTTGTTTTTAT
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