EY665182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_AJECN (ATP-dependent rRNA helicase SPB4 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=SPB4 PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.889e-12 Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 67 KVTNEGLQQGYCVVPSAKRFILLYSFLKRNLS---KKVMVFFSSCNSVKFHSELLRYIQVDCFD---IHGKQKQQKRTTTFFDFCKA-EKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE-*YSSGGVGTAPWKKGAKGNAPLFL 483 K T LQ Y + P + + ++ LS ++ +++FS+C +V ++ +L I D F +HGK Q R F F + ILL TDVAARGLDIPAVD ++Q DPP +PK + G G A G +G + +FL Sbjct: 274 KRTPASLQMTYLLTPPTHKLPAV-KYIVSTLSPTPQRSILYFSTCAAVDYYQHILPCILPDRFTTIPLHGKHPPQVRQKNFTRFVNSVTSSILLTTDVAARGLDIPAVDLVIQIDPPTDPKAFLHRCGRAGRA----GRRGLSVIFL 415
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP7_SCHPO (ATP-dependent RNA helicase dbp7 OS=Schizosaccharomyces pombe GN=dbp7 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.889e-12 Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 46 DVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLS--KKVMVFFSSCNSVKFHSELLRY---------------------------IQVD----CFDIHGKQKQQKRTTTFFDFCKAEKG---ILLCTDVAARGLDIPAVDWIVQYDPP 396 + +DG ++ + LQ+ Y VVP R + L + L+ ++ KK+++F S +SV FH E R +++D + +HG QQ RT+T F +E ILLCTDVAARGLD+P VD +VQYD P Sbjct: 373 ETNDGYSQAPEQLLQR-YVVVPPKLRLVSLVALLRSHVRSYKKIIIFLSCSDSVDFHFEAFRCAINADEMEEAVKEKPDSEGDIISNAPALRIDGKSNVYRLHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAP 524
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_SCHPO (ATP-dependent rRNA helicase spb4 OS=Schizosaccharomyces pombe GN=spb4 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.773e-12 Identity = 50/133 (37.59%), Postives = 76/133 (57.14%), Query Frame = 1 Query: 163 KKVMVFFSSCNSVK-FHSELLRY-IQVDCFDIHGKQKQQKRTTTFFDFCKA-EKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE-*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPSIF*RAGKNPLVK 549 +K +VFFSSC SV+ F+S L Y + + +HG+Q Q R+ F F K+ +K +L TD+A+RGLDIP VD+++Q DPP +PK + G G A G G A + L+ + + + R K P+ + Sbjct: 257 EKAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNFEKFKKSNKKTVLFTTDIASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRA----GRAGVAIVLLNDGREEEYEELL-RVRKVPITR 384
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_PICGU (ATP-dependent rRNA helicase SPB4 OS=Pichia guilliermondii GN=SPB4 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.773e-12 Identity = 43/134 (32.09%), Postives = 69/134 (51.49%), Query Frame = 1 Query: 28 TTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ----VDCFDIHGKQKQQKRTTTFFDFCKAE----KGILLCTDVAARGLDIPAVDWIVQYDPPDEP 405 + PV I V+ + + + L Y +V + +L + L KK +V+F +C SVK+ + + + V+ IHG+ + R F + + K +LL TDVAARG+DIP VD ++Q DPP +P Sbjct: 223 SNPVKISVNSNKAESKPQSLTVNYMMVNPETKIAVLINMLSTLQYKKCIVYFPTCASVKYFYSVFQKLHPLEDVNLTSIHGQLLAKARLKAMNKFTEGDVRTSKHVLLTTDVAARGIDIPEVDLVIQLDPPTDP 356
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP8_GIBZE (ATP-dependent RNA helicase DBP8 OS=Gibberella zeae GN=DBP8 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.927e-12 Identity = 51/155 (32.90%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 34 PVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFL--KRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSR 492 PV++ D +T L+Q Y VP + L++FL + N+ K V++F + ++ + LLR ++ +H K Q++R F + IL+ TDVAARGLDIP V ++ YD P +P + Y TA + G KG A F+ R Sbjct: 327 PVFVCEVDTQTLAIPATLKQMYIKVPVTHKEHYLHTFLLTEANVDKTVILFCNRTSTADYLHHLLRMLEHRVTSLHSKLPQRQRIDNLARFRASAARILVATDVAARGLDIPEVSLVINYDLPRDPDD-YIHRVGRTA--RAGRKGEAVSFVGQR 478
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP7_YARLI (ATP-dependent RNA helicase DBP7 OS=Yarrowia lipolytica GN=DBP7 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.927e-12 Identity = 54/161 (33.54%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 85 LQQGYCVVPSAKRFILLYSFLKRNL-------SKKVMVFFSSCNSVKFHSE--------------------LLRYIQVDCFDIHGKQKQQKRTTTFFDFCK-AEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483 L Q + VVP+ R + L L+ ++ + KV+VF S +SV FH + LL + + +HG QQ RT T F K + ILLCTDVA+RGLD+P + +++YDPP ++ G TA + G G A LFL Sbjct: 488 LVQEWVVVPAKLRLVTLLGALRGDILQSSEKTNTKVIVFLSCSDSVDFHFDVLSRDGSQINKMDTAKTAPLLLDDVSTSVYKLHGSLSQQARTATLASFAKNSTPSILLCTDVASRGLDLPKITHVIEYDPPFSIEDHLHRVG-RTA--RAGQDGRALLFL 645
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: RRP3_USTMA (ATP-dependent rRNA helicase RRP3 OS=Ustilago maydis GN=RRP3 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.404e-12 Identity = 44/126 (34.92%), Postives = 63/126 (50.00%), Query Frame = 1 Query: 34 PVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE 411 PV ++VD T V+ L+Q Y +P A + L ++VF + + + S LLR + +HG+ QQ R F + IL+ TDVA+RGLDIPAVD +V YD P K+ Sbjct: 303 PVRVEVDTKYTTVST--LKQHYMFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHGQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKD 426
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: MAK5_NEUCR (ATP-dependent RNA helicase mak-5 OS=Neurospora crassa GN=mak-5 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.404e-12 Identity = 46/139 (33.09%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 7 LARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKG---------ILLCTDVAARGLDIPAVDWIVQYDPP 396 L +L+F+ TP ++D + N L++G + ++ + LY+ L +++ +VF +S NSV+ + LL + + F +H QQ R + F KA +G IL+ TDVAARGLDIP VD ++ Y P Sbjct: 471 LQKLNFRETPKFVDANPVHQMAEN--LKEGLIMCGDMEKDLYLYATLMLQPTRRALVFTNSVNSVRRLTPLLENLNLPAFPLHSGMIQQARLRSIDRF-KANEGAKKKNGSAAILVATDVAARGLDIPDVDLVIHYHVP 606
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX55_CAEEL (Probable ATP-dependent RNA helicase DDX55 homolog OS=Caenorhabditis elegans GN=ZK512.2 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 8.404e-12 Identity = 43/155 (27.74%), Postives = 77/155 (49.68%), Query Frame = 1 Query: 43 IDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYI--QVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTA--PWKKGAKGNAPLFLDSRK 495 + V R L+ Y + ++ + F+++ KK+++FF SCNSV++ ++ + F +HGK R + F + G+++ TDV ARG+DI +DW++Q+D P +SS V A + G +GNA + + S + Sbjct: 218 VKVAQERNSAAPSTLKNYYVECRADEKTSVCLEFIRQRTDKKILIFFPSCNSVRYFYKIFERCLGKRPLFAVHGKCSNPHRASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPK-----HSSWFVHRAGRTARCGREGNALILIASEQ 367
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_EMENI (ATP-dependent rRNA helicase spb4 OS=Emericella nidulans GN=spb4 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.098e-11 Identity = 50/126 (39.68%), Postives = 64/126 (50.79%), Query Frame = 1 Query: 49 VDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLK--RNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDI---HGKQKQQKRTTTFFDFCKAEK-GILLCTDVAARGLDIPAVDWIVQYDPPDEPK 408 VDD RT + LQ Y P +F L L + K + F S+C+ V + S +L I + F + HGK R F F A ILL TDVA+RGLDIP+VD +VQ DPP +PK Sbjct: 259 VDDKRTPAS---LQMTYLTQPPTGKFPALKHILNSVQPTPSKSIFFVSTCSGVDYLSVILPLILGNDFQLIPLHGKHPANVRQKNFNRFVNAHNPAILLTTDVASRGLDIPSVDLVVQIDPPSDPK 381 The following BLAST results are available for this feature:
BLAST of EY665182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665182 ID=EY665182; Name=EY665182; organism=Citrus sinensis; type=EST; length=1045bpback to top |