EY665182

Overview
NameEY665182
Unique NameEY665182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1045
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP8_SCLS1 (ATP-dependent RNA helicase dbp8 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp8 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.098e-11
Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = 1
Query:   34 PVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFL--KRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSR 492
            PV++   D +       L Q +  VP   R   L+ FL  ++NL K +++F +   +  + + LLR ++     +H K  Q++R      F  +   IL+ TDVAARGLDIP V  ++ YD P +P + Y      TA  + G KG A  F+  R
Sbjct:  322 PVFVCEVDTQALAIPSSLNQMHLQVPVTHREHYLHMFLLTEKNLPKSIVIFCNRTATADYLTHLLRLLEHRVTALHSKLPQRQRIDNLGRFRASAARILVATDVAARGLDIPEVGLVINYDVPRDPDD-YIHRVGRTA--RAGRKGEAVTFVGQR 473          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_ASPOR (ATP-dependent rRNA helicase spb4 OS=Aspergillus oryzae GN=spb4 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.434e-11
Identity = 47/120 (39.17%), Postives = 61/120 (50.83%), Query Frame = 1
Query:   67 KVTNEGLQQGYCVVPSAKRFILLYSFLKR--NLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDI---HGKQKQQKRTTTFFDFCKA-EKGILLCTDVAARGLDIPAVDWIVQYDPPDEPK 408
            K T   LQ  Y   P+  +F  L   L       +K + F S+C+ V + S +L  I  D F +   HGK     R   F  F  +    ILL TDVA+RGLDIP+VD +VQ DPP +PK
Sbjct:  262 KRTPASLQMTYLTTPTIHKFDALKHILHSVDPTPQKTIFFASTCSGVDYLSAILPLILGDDFQLISLHGKHPANVREKNFNRFVNSYSPAILLTTDVASRGLDIPSVDLVVQIDPPSDPK 381          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_ASPNC (ATP-dependent rRNA helicase spb4 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=spb4 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.434e-11
Identity = 47/122 (38.52%), Postives = 64/122 (52.46%), Query Frame = 1
Query:   67 KVTNEGLQQGYCVVPSAKRFI----LLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDI---HGKQKQQKRTTTFFDFCKAEK-GILLCTDVAARGLDIPAVDWIVQYDPPDEPK 408
            K T   LQ  Y   P   +F     +LYS       +K ++F S+C+ V + S +L  I  D F +   HGK +   R   F  F  +    ILL TDVA+RGLDIP+VD ++Q DPP +PK
Sbjct:  263 KRTPASLQMTYLTAPPTHKFPAIKHILYSL--EPAPQKTIMFVSTCSGVDYLSAILPSIIGDDFQLIPLHGKHQANVREKNFNRFVNSHTPAILLTTDVASRGLDIPSVDVVIQIDPPSDPK 382          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_NEUCR (ATP-dependent rRNA helicase spb-4 OS=Neurospora crassa GN=spb-4 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.872e-11
Identity = 41/118 (34.75%), Postives = 66/118 (55.93%), Query Frame = 1
Query:   73 TNEGLQQGYCVVPSAKRFILLYSFLKR--NLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDI---HGKQKQQKRTTTFFDFCKAEKG-ILLCTDVAARGLDIPAVDWIVQYDPPDEPK 408
            T   LQ  Y V P++++   +   L++     ++ ++FFSSC +VK+ S +L  +    F +   HGK + + R   +  F       +LL TD+AARGLDIP VD ++Q+DPP + K
Sbjct:  267 TPMSLQMSYLVTPASQKMPAIVQLLEKLEPRPQRSIIFFSSCMAVKYFSRILGAVLPAGFSVTSLHGKLEPKVREKNYERFVNTTSPMVLLTTDLAARGLDIPQVDLVIQHDPPTDTK 384          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_LODEL (ATP-dependent rRNA helicase SPB4 OS=Lodderomyces elongisporus GN=SPB4 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.872e-11
Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = 1
Query:   85 LQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYI------QVDC-----FDIHGKQKQQKRTTTFFDFCK----AEKGILLCTDVAARGLDIPAVDWIVQYDPPDEP 405
            LQ  Y ++    +   +   L+ N  KK +V+F +C SVK   ++L  +       +D      F +HG+   + R  T   F +    ++K IL+ TDVAARG+DIP VD ++Q DPP +P
Sbjct:  254 LQLSYMMIEPEHKLTTMLQMLRDNQFKKAIVYFPTCTSVKHFYQMLSKLCKSSANDIDISALLFFSLHGQLTTKSRLNTLEKFTEGNDESKKYILMATDVAARGIDIPDVDLVIQIDPPTDP 375          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_KLULA (ATP-dependent rRNA helicase SPB4 OS=Kluyveromyces lactis GN=SPB4 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.872e-11
Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = 1
Query:   85 LQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKF------HSELLRYIQVDC--FDIHGKQKQQKRTTTFFDFCK-AEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402
            L   Y V+P   +  LL + L     KK +V+F +C SV +      H + L  IQ D   F +HGK + Q R  T   F       +L  TDVAARG+DIP VD ++Q DPP +
Sbjct:  236 LSINYIVIPPKDKLQLLLTLLNNYRFKKCIVYFPTCISVTYFYAFINHLKELNLIQDDLKLFSLHGKLQTQSRMKTLDSFTSNLTDAVLFTTDVAARGIDIPDVDLVIQLDPPTD 350          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB42_CANAL (ATP-dependent rRNA helicase SPB42 OS=Candida albicans GN=SPB42 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.872e-11
Identity = 40/128 (31.25%), Postives = 65/128 (50.78%), Query Frame = 1
Query:   58 GRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--------VDCFDIHGKQKQQKRTTTFFDFCKAE----KGILLCTDVAARGLDIPAVDWIVQYDPPDEP 405
            G    + + LQ  Y ++    +   L + L +   KK +V+F +C SVK   ++   +         +  F +HG+   + R  T  +F + +    K IL+ TDVAARG+DIP VD ++Q DPP +P
Sbjct:  244 GEQSNSPKSLQLSYMMINPELKITTLLTILSKYQYKKAIVYFPTCTSVKHFYQIFNKVYQQESSDEPLKFFSLHGQLNTKSRLKTLDNFTQGDINLYKHILMTTDVAARGIDIPDVDLVIQIDPPTDP 371          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB41_CANAL (ATP-dependent rRNA helicase SPB41 OS=Candida albicans GN=SPB41 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.872e-11
Identity = 40/128 (31.25%), Postives = 65/128 (50.78%), Query Frame = 1
Query:   58 GRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--------VDCFDIHGKQKQQKRTTTFFDFCKAE----KGILLCTDVAARGLDIPAVDWIVQYDPPDEP 405
            G    + + LQ  Y ++    +   L + L +   KK +V+F +C SVK   ++   +         +  F +HG+   + R  T  +F + +    K IL+ TDVAARG+DIP VD ++Q DPP +P
Sbjct:  244 GEQSNSPKSLQLSYMMINPELKITTLLTILSKYQYKKAIVYFPTCTSVKHFYQIFNKVYQQESSDEPLKFFSLHGQLNTKSRLKTLDNFTQGDINLYKHILMTTDVAARGIDIPDVDLVIQIDPPTDP 371          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP8_MAGGR (ATP-dependent RNA helicase DBP8 OS=Magnaporthe grisea GN=DBP8 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.872e-11
Identity = 49/155 (31.61%), Postives = 76/155 (49.03%), Query Frame = 1
Query:   34 PVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFL--KRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSR 492
            PV++   D +     + L+Q Y  +    R   L+ FL    N  + +++F +  ++ +F   LLR +      +H K +QQ+R      F  +   IL+ TDVA+RGLDIP V  +V YD P +P + Y      TA  + G KG A  F+  R
Sbjct:  347 PVHVCEVDTQVLAIPDSLKQSYIQLTVTHREHFLHEFLLTAANTERSIIIFVNRTSTAQFLHHLLRLLDHRVTSLHSKLRQQQRIDNLGRFRASAARILVATDVASRGLDIPEVSVVVNYDLPRDPDD-YIHRVGRTA--RAGRKGEAVNFVGQR 498          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP7_GIBZE (ATP-dependent RNA helicase DBP7 OS=Gibberella zeae GN=DBP7 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.872e-11
Identity = 55/169 (32.54%), Postives = 78/169 (46.15%), Query Frame = 1
Query:    4 DLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSK-----KVMVFFSSCNSVKFHSELLR--------------------------YI------QVDCFDIHGKQKQQKRTTTF--FDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDP 393
            D   L+ +   + +DV     K   + L Q Y VVP+  R + L S+LK   S+     K ++F S  +SV FH ELLR                          YI      +V    +HG   Q  RT T   F  CK+   +L+ TDV++RGLDIP+VD +++YDP
Sbjct:  378 DATFLAAKKEDMELDVQKSEMKAPAQ-LHQYYSVVPAKLRLVTLISYLKSTFSRRGKTMKAIIFISCADSVDFHYELLRDPNTTEAPVAASKEAESISKTVSKAAYITSPASPEVVLHRMHGSLSQPIRTATLKSFSACKSPS-LLITTDVSSRGLDIPSVDLVIEYDP 544          
The following BLAST results are available for this feature:
BLAST of EY665182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
DBP8_SCLS11.098e-1132.26ATP-dependent RNA helicase dbp8 OS=Sclerotinia scl... [more]
SPB4_ASPOR1.434e-1139.17ATP-dependent rRNA helicase spb4 OS=Aspergillus or... [more]
SPB4_ASPNC1.434e-1138.52ATP-dependent rRNA helicase spb4 OS=Aspergillus ni... [more]
SPB4_NEUCR1.872e-1134.75ATP-dependent rRNA helicase spb-4 OS=Neurospora cr... [more]
SPB4_LODEL1.872e-1133.61ATP-dependent rRNA helicase SPB4 OS=Lodderomyces e... [more]
SPB4_KLULA1.872e-1138.26ATP-dependent rRNA helicase SPB4 OS=Kluyveromyces ... [more]
SPB42_CANAL1.872e-1131.25ATP-dependent rRNA helicase SPB42 OS=Candida albic... [more]
SPB41_CANAL1.872e-1131.25ATP-dependent rRNA helicase SPB41 OS=Candida albic... [more]
DBP8_MAGGR1.872e-1131.61ATP-dependent RNA helicase DBP8 OS=Magnaporthe gri... [more]
DBP7_GIBZE1.872e-1132.54ATP-dependent RNA helicase DBP7 OS=Gibberella zeae... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-A02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665182 ID=EY665182; Name=EY665182; organism=Citrus sinensis; type=EST; length=1045bp
GAGGATCTTGCTCGCTTGTCATTTCAGACAACTCCAGTTTATATTGATGT
GGATGATGGGAGAACTAAGGTCACCAACGAAGGCCTGCAGCAAGGCTATT
GTGTGGTGCCCAGTGCCAAGAGATTTATCCTTCTATATTCCTTCTTGAAG
AGGAATCTGTCAAAGAAAGTGATGGTCTTCTTCTCCTCGTGTAATTCAGT
CAAATTTCATTCAGAACTTCTCAGATATATTCAGGTGGATTGCTTTGATA
TCCATGGAAAGCAAAAGCAACAGAAACGAACCACTACCTTCTTTGACTTC
TGCAAGGCGGAGAAGGGCATCTTGTTGTGTACTGATGTAGCTGCCCGTGG
ACTTGACATTCCTGCTGTGGACTGGATTGTGCAGTATGATCCTCCTGATG
AACCCAAGGAATAATATTCTTCGGGTGGGGTCGGGACAGCCCCGTGGAAG
AAAGGTGCAAAAGGAAATGCCCCACTTTTTCTTGATTCCAGAAAGAATTT
ACATTTTCCTTCCATATTCTGAAGGGCTGGCAAAAATCCCCTGGTTAAAA
AAATTATGAATTTTGAACCAAAAAAAACTGGGTCTAAGGTGCAGTCCCCT
TCCGGGGAAAAAATTGGGTTGGCTAACACCTATTTAATTTTGAAACCAAC
CCCCCCTAAAAATGGCGTTACGCATTTTTTATTTCCATACCAATAGATTT
CCCCACCCCCTAAGAAAGAATAAATCTTCCAAGGTATACCCCCCCCTATT
GATTTGGAAGGGGGAACCCGCCCTCGTTTTTATTTATTGTTTTTTTTTCT
CCCCCCCCCCCTAGAGGGGGAAAAATCCAAACACATAGAAAACCACGCTG
GTCCCCTCTTATAATTTTTTAAAAAAATAAAAAACCACCCCAAAAAAACT
CACACAAAAGAGAACACAAAAACAAATTGGTTTTTTTCTCATTGAAAACA
CTCCACCCCCCTTTTTATTGGAGTGGTAGGAAACAGAAGAAAGAATAATA
AAAAATAAAAATAAAAATACACACCCCCCCCACTTTTGTTTTTAT
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