EY665182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: RH55_ARATH (DEAD-box ATP-dependent RNA helicase 55 OS=Arabidopsis thaliana GN=RH55 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.445e-11 Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 82 GLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYI----QVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWI 378 GL+ Y + ++ L L N +KK++VFF +C V + ++ I + F HGK Q+ R T F +A G+LLCTDVAARGLDIP + +I Sbjct: 212 GLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYI 314
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_PHANO (ATP-dependent rRNA helicase SPB4 OS=Phaeosphaeria nodorum GN=SPB4 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.194e-11 Identity = 53/153 (34.64%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 52 DDGRT--KVTNEGLQQGYCVVPSAKRFILLYSFLK--RNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKA-EKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE-*YSSGGVGTAPWKKGAKGNAPLFLD 486 +DG+ K T LQ Y V P + + + L + +K +++ S+C SV + +L + D +HGK + R F F + ILL TDVAARGLDIP+VD + Q DPP +PK + G G A G +G A FL+ Sbjct: 264 EDGKIEDKRTPASLQMSYLVTPPSHKIPAMKKILSSLQPQPQKSILYLSTCFSVDYFQHVLPEVLQGYDIVPLHGKHPDKVRRKNFNKFVDSVTPSILLTTDVAARGLDIPSVDLVFQLDPPSDPKTFIHRCGRAGRA----GRRGLAVTFLN 412
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP8_BOTFB (ATP-dependent RNA helicase dbp8 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp8 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.194e-11 Identity = 53/169 (31.36%), Postives = 81/169 (47.93%), Query Frame = 1 Query: 34 PVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFL--KRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPSIF*RAGK 534 PV++ D + L Q + VP R L+ FL ++NL K +++F + + + + LLR + +H K Q++R F + IL+ TDVAARGLDIP V ++ YD P +P + Y TA + G KG A F+ R +I R G+ Sbjct: 327 PVFVCEVDTQALAIPPSLNQMHLQVPVTHREHYLHMFLLTEKNLPKSIVIFCNRTATADYLTHLLRLLDHRVTALHSKLPQRQRIDNLGRFRASAARILVATDVAARGLDIPEVGLVINYDIPRDPDD-YIHRVGRTA--RAGRKGEAVSFVGQRDVQLIQAIENRVGR 492
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_ENCCU (ATP-dependent rRNA helicase SPB4 OS=Encephalitozoon cuniculi GN=SPB4 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.171e-11 Identity = 51/155 (32.90%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 22 FQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQV-DCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483 F PV I+V + V E Y VV ++ ++L + ++ +VFF++C+ V F S L+ + IHGK Q +R + +F + + G+L CTDVAARG+D VD +V +D P E G TA + G+KG + LF+ Sbjct: 198 FLRNPVSINVGNNEMPVALE-----YIVVSPMEKLLVLMDIVT---GRRCIVFFATCSEVDFFSGLVSRAGFGNICKIHGKISQDERNRVYEEFFQRD-GLLFCTDVAARGIDFRGVDLVVHFDVPKEYSSIVHRSG-RTA--RNGSKGESVLFV 340
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP8_NEUCR (ATP-dependent RNA helicase dbp-8 OS=Neurospora crassa GN=dbp-8 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.171e-11 Identity = 51/155 (32.90%), Postives = 76/155 (49.03%), Query Frame = 1 Query: 34 PVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFL--KRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSR 492 PV++ D + L+Q + VP R L+ FL +N+ K V++F + ++ F LLR + +H K Q +R F + IL+ TDVAARGLDIP V ++ YD P +P + Y TA + G KG+A F+ R Sbjct: 406 PVFVCEVDTQRLAIPATLRQMHLQVPVTHREHYLHMFLLTPQNVDKSVIIFCNRTSTADFLHHLLRLLDHRVTSLHSKLPQSQRIDNLGRFRASAARILVATDVAARGLDIPEVKIVINYDIPRDPDD-YIHRVGRTA--RAGRKGDAVTFVGQR 557
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_COCIM (ATP-dependent rRNA helicase SPB4 OS=Coccidioides immitis GN=SPB4 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.448e-11 Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 154 NLSKKVMVFFSSCNSVKFHSELLRYIQVDCF---DIHGKQKQQKRTTTFFDFCKA-EKGILLCTDVAARGLDIPAVDWIVQYDPPDEPK 408 N +K +++FS+C +V + S +L + + F +HGK R F F + +LL TDVAARGLDIP VD ++Q+DPP +PK Sbjct: 274 NTPQKTILYFSTCAAVDYWSHVLPSLLPEIFVTLPLHGKHPPNVRQKNFSRFTNSVSPSVLLTTDVAARGLDIPLVDLVIQFDPPTDPK 362
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: MAK5_EMENI (ATP-dependent RNA helicase mak5 OS=Emericella nidulans GN=mak5 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.448e-11 Identity = 44/134 (32.84%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 7 LARLSF-QTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGK--QKQQKRTTTFFDFCKAEKG-ILLCTDVAARGLDIPAVDWIVQYDPP 396 L +L+F + P +IDV+ EGL++G P+ ++ + LY+ L + + +VF +S ++V+ ++LL+ +Q+ +H QK + R+ F A G IL+ TDVAARGLDI +D+++ Y P Sbjct: 449 LQKLNFREEKPKFIDVNP--VSQMAEGLKEGIVECPAMEKDLYLYTLLLYHPKHRTLVFTNSISAVRRITQLLQTLQLPALALHSSMAQKARLRSVERFSSSTANPGTILVATDVAARGLDIKGIDFVIHYHAP 580
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_VANPO (ATP-dependent rRNA helicase SPB4 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=SPB4 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.115e-11 Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 103 VVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYI--------QVDCFDIHGKQKQQKRTTTFFDFCKA-EKGILLCTDVAARGLDIPAVDWIVQYDPPDEPK 408 VV + K+ + S + KK + +F +C+SV + ++Y+ ++ + +HGK + R T F + +LL TDVAARG+DIP VD ++Q DPP +P+ Sbjct: 242 VVETDKKLEQVISIINNYKFKKCIAYFPTCHSVTYFYSFMQYLLKKGIIKEEIQIYSLHGKLQTSARIKTLETFTETISNAVLLTTDVAARGIDIPDVDLVLQLDPPTDPE 352
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: MAK5_GIBZE (ATP-dependent RNA helicase MAK5 OS=Gibberella zeae GN=MAK5 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.115e-11 Identity = 40/127 (31.50%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 16 LSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPP 396 L F+ P +IDV+ EGL++G + ++ + LY+ L N ++ +VF +S ++V+ + LL + + +H + Q+ R + F + IL+ TDVAARGLDI VD ++ Y P Sbjct: 460 LKFRGEPKFIDVNP--VSQMAEGLREGLIECGAMEKDLYLYTVLILNPGRRTLVFTNSISAVRRLTPLLTNLNLTALPLHSQMAQKARHRSLERFTASRNSILIATDVAARGLDIKEVDQVLHYHVP 584 The following BLAST results are available for this feature:
BLAST of EY665182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665182 ID=EY665182; Name=EY665182; organism=Citrus sinensis; type=EST; length=1045bpback to top |