EY665182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX31_HUMAN (Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens GN=DDX31 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.697e-18 Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 79 EGLQQGYCVVPSAKRFILLYSFL----KRNLSKKVMVFFSSCNSVKFHSELLRY------------------IQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE 411 E L+Q VVPS R + L +F+ K +K++VFFSSC V+FH L +++ +HG +Q++RT F +F + +G+LLCTDVAARGLD+P V WIVQY+ P P E Sbjct: 479 ESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAE 611
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_ASHGO (ATP-dependent RNA helicase DBP4 OS=Ashbya gossypii GN=DBP4 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.697e-18 Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 4 DLARLSFQTTPVYIDVDDGRTK---VTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 DLARLS +D +K T E L+Q Y V + +L+SF+K +L K++VF SS V F E R +Q + +HG+QKQ RT T F +A+ L TDV ARG+D P+VDW++Q D P++ Sbjct: 234 DLARLSLADYKTVGTMDGPSSKNKPATPENLEQFYIQVALPDKLDILFSFIKSHLKSKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQTARTETLDKFSRAQHVCLFSTDVVARGIDFPSVDWVIQTDCPED 371
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_CRYNE (ATP-dependent RNA helicase DBP4 OS=Cryptococcus neoformans GN=DBP4 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.523e-18 Identity = 56/138 (40.58%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 7 LARLSFQTTPVYIDVDD-GRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSS---CNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 LA+LS P+YI + G V L+Q Y VVP ++ L+ F+K +L K +VF +S V+F E R + + +HGKQKQ R F F ++ +L+CTDVAARGLD PAVDW++Q D PD+ Sbjct: 263 LAKLSLYE-PLYISCNKPGEEGVMPANLEQYYAVVPLERKLDALWGFVKSHLKMKGIVFVTSGKQARRVRFIFETFRRLHPGLPLMHLHGKQKQPTRLDIFQRFSSSKSALLICTDVAARGLDFPAVDWVIQLDCPDD 399
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX55_HUMAN (ATP-dependent RNA helicase DDX55 OS=Homo sapiens GN=DDX55 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.025e-17 Identity = 53/141 (37.59%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDD-----GRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSE----LLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPP 396 E+L R + PV + V + + T L+ Y V + ++F L FL+ + +K +VFFS+C V+++ + L++ +++ C IHGK K KR F +F K + GIL+CTDV ARG+DIP V+W++QYDPP Sbjct: 210 ENLVRAGLRN-PVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMC--IHGKMKY-KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPP 346
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: RH32_ARATH (DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana GN=RH32 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.339e-17 Identity = 53/137 (38.69%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDI-PAVDWIVQYDPPDE 402 +DLARLS + P YI V T L Q +VP K+ +L+SF+K +L+ +++VF S+ VKF E ++ + +HGK Q+KR + F + + +L CTDV ARGLD AVDW+VQ D P++ Sbjct: 264 KDLARLSLRD-PEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWSFIKTHLNSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIE-RQSVLFCTDVLARGLDFDKAVDWVVQVDCPED 398
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX55_CHICK (ATP-dependent RNA helicase DDX55 OS=Gallus gallus GN=DDX55 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.339e-17 Identity = 54/139 (38.85%), Postives = 79/139 (56.83%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEG-----LQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYI--QVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPP 396 E+L R + PV I V + TN L+ Y + + ++F L FL+++ +K +VFFS+C V+++ + L + QV IHGK K KR F +F + GIL+CTDV ARG+DIP V W++QYDPP Sbjct: 210 ENLVRAGLRN-PVRISVKEKGVAATNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMCIHGKMKH-KRNKIFTEFRRLAGGILVCTDVMARGIDIPEVHWVLQYDPP 346
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX55_XENLA (ATP-dependent RNA helicase DDX55 OS=Xenopus laevis GN=ddx55 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.748e-17 Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 64 TKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSE----LLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPP 396 T+ T LQ Y + + ++F L +FL++ +K +VFFS+C V+++ + LL+ ++V C IHGK K KR F +F K GIL+CTDV ARG+DI V+W+VQYDPP Sbjct: 235 TQKTPIRLQNYYMICKADEKFNKLIAFLQKRKQEKHLVFFSTCACVEYYGKALEMLLKPVKVMC--IHGKMKH-KRNRIFTEFRKINSGILVCTDVMARGIDIHEVNWVVQYDPP 346
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX55_DANRE (ATP-dependent RNA helicase DDX55 OS=Danio rerio GN=ddx55 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.982e-17 Identity = 54/137 (39.42%), Postives = 81/137 (59.12%), Query Frame = 1 Query: 85 LQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSE----LLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483 L Y + + ++F L +FL+++ +K +VFFS+C V++ + L++ + + C IHGK K KR F DF + GIL+CTDV ARG+DIP V+W++QYDPP G TA + G +GNA +FL Sbjct: 242 LSNYYTMCRAEEKFNTLVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLVKNVSIHC--IHGKMKH-KRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCG-RTA--RIGNQGNALVFL 372
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: RH32_ORYSJ (DEAD-box ATP-dependent RNA helicase 32 OS=Oryza sativa subsp. japonica GN=Os07g0517000 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 8.677e-17 Identity = 50/135 (37.04%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPD 399 +DLAR+S + P YI V + T T + L+Q +VP ++ +L+SF+KR+L +++VF SS VKF E+ + ++ + +HG+ K + + +F K +L TD+ ARGLDI VDW+VQ D P+ Sbjct: 274 KDLARVSLKD-PEYISVHEEATTATPDTLEQYAMIVPLEQKLNMLWSFIKRHLKSRILVFLSSVKQVKFVYEVFKKLRPGISLRCMHGRMKYEVQQAIVAEF-KEGHSVLFSTDIFARGLDIEDVDWVVQVDCPE 406
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: RH18_ORYSJ (DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica GN=Os01g0164500 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.480e-16 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 82 GLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQV----DCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEP 405 GL+ Y + ++ + L FL +N KK+MV+F++C V + + +L + HGK KQ R F GIL+CTDVAARGLDIP VD IVQYDPP +P Sbjct: 258 GLRLEYMICEASNKSSQLVDFLVQNNGKKIMVYFATCACVDYWAIVLPLLDSLKGSPIIPYHGKMKQGPREKALASFSALSSGILVCTDVAARGLDIPHVDLIVQYDPPQDP 369 The following BLAST results are available for this feature:
BLAST of EY665182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665182 ID=EY665182; Name=EY665182; organism=Citrus sinensis; type=EST; length=1045bpback to top |