EH117790

Overview
NameEH117790
Unique NameEH117790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length229
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig765 contig Csv1_Contig765:1148..1376. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117790 vs. ExPASy Swiss-Prot
Match: OST48_XENTR (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus tropicalis GN=ddost PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.978e-24
Identity = 49/73 (67.12%), Postives = 60/73 (82.19%), Query Frame = -1
Query:    2 QFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 220
            QFK+PDVYGVFQFKV+Y RLGYT L  + Q+ VRP +H +YERF+P+AYPYY SAFS+M G FIF+IV L+ K
Sbjct:  359 QFKLPDVYGVFQFKVDYNRLGYTHLYSTTQVSVRPLQHTQYERFIPSAYPYYASAFSVMFGLFIFSIVFLHMK 431          
BLAST of EH117790 vs. ExPASy Swiss-Prot
Match: OST48_DROME (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Drosophila melanogaster GN=Ost48 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 3.280e-22
Identity = 47/77 (61.04%), Postives = 60/77 (77.92%), Query Frame = -1
Query:    2 AYQ--FKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 226
            AYQ  FK+PDVYGV+QFKV+Y R+GYT L  + Q+ VRP  H +YERF+P+A+PYY SAFSMM G F+F+ V L+ K
Sbjct:  358 AYQAKFKIPDVYGVYQFKVDYNRVGYTHLYSTTQVSVRPLEHTQYERFIPSAFPYYTSAFSMMIGVFVFSFVFLHFK 434          
BLAST of EH117790 vs. ExPASy Swiss-Prot
Match: OST48_CAEEL (Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Caenorhabditis elegans GN=T09A5.11 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.933e-20
Identity = 43/72 (59.72%), Postives = 57/72 (79.17%), Query Frame = -1
Query:    2 FKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 217
            FK+PDV GVF+F V+Y+R+GYT L   +Q+ VRP  H +YERF+ +AYPYY S+FSMMAG  +F+IV+LY K
Sbjct:  357 FKLPDVLGVFKFLVDYRRVGYTHLYDVQQVSVRPLWHTQYERFIRSAYPYYASSFSMMAGLVLFSIVYLYHK 428          
BLAST of EH117790 vs. ExPASy Swiss-Prot
Match: OST48_DICDI (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit homolog OS=Dictyostelium discoideum GN=ddost PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.402e-18
Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = -1
Query:    2 FKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 217
            FK+PDVYGVF F+    + GY++L    + P+ P+RH+ YERF+PAA+PYY + FSM+ G FIF+I+ L++K
Sbjct:  350 FKLPDVYGVFTFEASIHKSGYSTLDHIYRKPILPFRHDSYERFIPAAFPYYATCFSMLIGTFIFSIIFLFNK 421          
BLAST of EH117790 vs. ExPASy Swiss-Prot
Match: OSTB_SCHPO (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Schizosaccharomyces pombe GN=SPCC338.15 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.804e-12
Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = -1
Query:    2 PDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 208
            PD YG F FK+EY+R G T +       +R + HNE+ RFLP AYPYY S FS++  F +F  + L  K
Sbjct:  356 PDHYGDFTFKIEYKRPGLTPIEEKSTFTLRQFFHNEFPRFLPHAYPYYASCFSVLGAFLLFCGIWLLQK 424          
The following BLAST results are available for this feature:
BLAST of EH117790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
OST48_XENTR5.978e-2467.12Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_DROME3.280e-2261.04Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_CAEEL8.933e-2059.72Probable dolichyl-diphosphooligosaccharide--protei... [more]
OST48_DICDI6.402e-1851.39Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OSTB_SCHPO1.804e-1246.38Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

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Properties
Property NameValue
Genbank descriptionfjfw20 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117790 ID=EH117790; Name=EH117790; organism=Citrus sinensis; type=EST; length=229bp
ACTTGCTGTAAAGGTGAACGATGGTGAAGATAAAGAACCCAGCCATCATA
GAAAATGCTGATCCATAATATGGGTAAGCTGCTGGTAAAAATCTTTCGTA
TTCATTGTGTCTGTAGGGCCTGACTGGAATCTGTTTTGATAGGGATAAGC
TGGTGTATCCTAGTCTTTGGTACTCGACCTTGAATTGGAAGACTCCATAA
ACATCTGGAACCTTGAATTGGTACGCAGT
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