EH117788

Overview
NameEH117788
Unique NameEH117788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length211
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2178 contig Csv1_Contig2178:412..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK2_ARATH (Mitogen-activated protein kinase 2 OS=Arabidopsis thaliana GN=MPK2 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.087e-21
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F DVY+  ELMDTDL+QII+S+Q LS +HCQYFL+QLLRGLKYIHSAN++HRDLKP NL
Sbjct:  106 FKDVYLVYELMDTDLHQIIKSSQVLSNDHCQYFLFQLLRGLKYIHSANILHRDLKPGNL 164          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK1_ARATH (Mitogen-activated protein kinase 1 OS=Arabidopsis thaliana GN=MPK1 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.087e-21
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F DVY+  ELMDTDL+QII+S+Q LS +HCQYFL+QLLRGLKYIHSAN++HRDLKP NL
Sbjct:  106 FKDVYLVYELMDTDLHQIIKSSQVLSNDHCQYFLFQLLRGLKYIHSANILHRDLKPGNL 164          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK4_ORYSJ (Mitogen-activated protein kinase 4 OS=Oryza sativa subsp. japonica GN=MPK4 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.352e-20
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F DVY+  ELMDTDL+QII+S+Q LS +HCQYFL+QLLRGLKY+HSA ++HRDLKP NL
Sbjct:  106 FKDVYLVYELMDTDLHQIIKSSQPLSNDHCQYFLFQLLRGLKYLHSAGILHRDLKPGNL 164          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK11_ARATH (Mitogen-activated protein kinase 11 OS=Arabidopsis thaliana GN=MPK11 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.352e-20
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F DV+I  ELMDTDL+ IIRSNQ L+++H ++FLYQLLRGLKY+HSANV+HRDLKPSNL L
Sbjct:  114 FNDVHIVYELMDTDLHHIIRSNQPLTDDHSRFFLYQLLRGLKYVHSANVLHRDLKPSNLLL 174          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK3_ORYSJ (Mitogen-activated protein kinase 3 OS=Oryza sativa subsp. japonica GN=MPK3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.307e-20
Identity = 43/59 (72.88%), Postives = 51/59 (86.44%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F DVY+  ELMDTDL+QII+S Q LS +HCQYFL+QLLRGLKY+HSA ++HRDLKP NL
Sbjct:  106 FKDVYLVYELMDTDLHQIIKSPQGLSNDHCQYFLFQLLRGLKYLHSAEILHRDLKPGNL 164          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK12_ARATH (Mitogen-activated protein kinase 12 OS=Arabidopsis thaliana GN=MPK12 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.351e-19
Identity = 40/61 (65.57%), Postives = 53/61 (86.89%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F DVYI  ELMDTDL +I+RSNQ+L+ + C++ +YQLLRGLKY+HSAN++HRDL+PSN+ L
Sbjct:  115 FNDVYIVYELMDTDLQRILRSNQTLTSDQCRFLVYQLLRGLKYVHSANILHRDLRPSNVLL 175          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK10_ARATH (Mitogen-activated protein kinase 10 OS=Arabidopsis thaliana GN=MPK10 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.653e-18
Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F DVYI  ELM+ DLY+ ++S+Q L+++H  YF+YQ+LRGLKYIHSANV+HRDLKPSNL L
Sbjct:  134 FEDVYIVNELMEFDLYRTLKSDQELTKDHGMYFMYQILRGLKYIHSANVLHRDLKPSNLLL 194          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK16_ARATH (Mitogen-activated protein kinase 16 OS=Arabidopsis thaliana GN=MPK16 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18
Identity = 38/60 (63.33%), Postives = 51/60 (85.00%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQLLRGLKYIH+ANV HRDLKP N+
Sbjct:   98 EFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI 157          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK15_ORYSJ (Mitogen-activated protein kinase 15 OS=Oryza sativa subsp. japonica GN=MPK15 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18
Identity = 38/60 (63.33%), Postives = 51/60 (85.00%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQLLRGLKYIH+ANV HRDLKP N+
Sbjct:   86 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI 145          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK14_ORYSJ (Mitogen-activated protein kinase 14 OS=Oryza sativa subsp. japonica GN=MPK14 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18
Identity = 38/60 (63.33%), Postives = 51/60 (85.00%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQLLRGLKYIH+ANV HRDLKP N+
Sbjct:   86 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI 145          
The following BLAST results are available for this feature:
BLAST of EH117788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
MPK2_ARATH2.087e-2176.27Mitogen-activated protein kinase 2 OS=Arabidopsis ... [more]
MPK1_ARATH2.087e-2176.27Mitogen-activated protein kinase 1 OS=Arabidopsis ... [more]
MPK4_ORYSJ1.352e-2072.88Mitogen-activated protein kinase 4 OS=Oryza sativa... [more]
MPK11_ARATH1.352e-2073.77Mitogen-activated protein kinase 11 OS=Arabidopsis... [more]
MPK3_ORYSJ2.307e-2072.88Mitogen-activated protein kinase 3 OS=Oryza sativa... [more]
MPK12_ARATH4.351e-1965.57Mitogen-activated protein kinase 12 OS=Arabidopsis... [more]
MPK10_ARATH1.653e-1867.21Mitogen-activated protein kinase 10 OS=Arabidopsis... [more]
MPK16_ARATH2.159e-1863.33Mitogen-activated protein kinase 16 OS=Arabidopsis... [more]
MPK15_ORYSJ2.159e-1863.33Mitogen-activated protein kinase 15 OS=Oryza sativ... [more]
MPK14_ORYSJ2.159e-1863.33Mitogen-activated protein kinase 14 OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionfjfw17 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117788 ID=EH117788; Name=EH117788; organism=Citrus sinensis; type=EST; length=211bp
GACGATGAGTCCTGAGTAACGAGAGATTGCTGGGCTTCAAATCCCGATGA
ATAACATTTGCTGAATGGATATACTTGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCCTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCATGAGTTCCGCAGCAATATAGACATCAGTGAAT
TGGTACGCAGT
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