EH117788

Overview
NameEH117788
Unique NameEH117788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length211
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2178 contig Csv1_Contig2178:412..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK01_RAT (Mitogen-activated protein kinase 1 OS=Rattus norvegicus GN=Mapk1 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 4.810e-18
Identity = 44/68 (64.71%), Postives = 54/68 (79.41%), Query Frame = -1
Query:    8 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSLLRT 211
            T  Q  DVYI  +LM+TDLY+++++ Q LS +H  YFLYQ+LRGLKYIHSANV+HRDLKPSNL L  T
Sbjct:   92 TIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 158          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK01_MOUSE (Mitogen-activated protein kinase 1 OS=Mus musculus GN=Mapk1 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 4.810e-18
Identity = 44/68 (64.71%), Postives = 54/68 (79.41%), Query Frame = -1
Query:    8 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSLLRT 211
            T  Q  DVYI  +LM+TDLY+++++ Q LS +H  YFLYQ+LRGLKYIHSANV+HRDLKPSNL L  T
Sbjct:   92 TIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 158          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK01_HUMAN (Mitogen-activated protein kinase 1 OS=Homo sapiens GN=MAPK1 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 4.810e-18
Identity = 44/68 (64.71%), Postives = 54/68 (79.41%), Query Frame = -1
Query:    8 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSLLRT 211
            T  Q  DVYI  +LM+TDLY+++++ Q LS +H  YFLYQ+LRGLKYIHSANV+HRDLKPSNL L  T
Sbjct:   94 TIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 160          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK01_BOVIN (Mitogen-activated protein kinase 1 OS=Bos taurus GN=MAPK1 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 4.810e-18
Identity = 44/68 (64.71%), Postives = 54/68 (79.41%), Query Frame = -1
Query:    8 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSLLRT 211
            T  Q  DVYI  +LM+TDLY+++++ Q LS +H  YFLYQ+LRGLKYIHSANV+HRDLKPSNL L  T
Sbjct:   94 TIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 160          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK9_ARATH (Mitogen-activated protein kinase 9 OS=Arabidopsis thaliana GN=MPK9 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.282e-18
Identity = 37/60 (61.67%), Postives = 51/60 (85.00%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQLLRGLK+IH+ANV HRDLKP N+
Sbjct:   96 EFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNI 155          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: CPK1_CRYNE (Mitogen-activated protein kinase CPK1 OS=Cryptococcus neoformans GN=CPK1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.282e-18
Identity = 41/61 (67.21%), Postives = 53/61 (86.89%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F +VY+  ELM+TDL+++IRS Q LS++HCQYF+YQ LRGLK +HSA+V+HRDLKPSNL L
Sbjct:   89 FNEVYLVQELMETDLHRVIRS-QELSDDHCQYFVYQTLRGLKALHSADVLHRDLKPSNLLL 148          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: SPK1_SCHPO (Mitogen-activated protein kinase spk1 OS=Schizosaccharomyces pombe GN=spk1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.205e-18
Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = -1
Query:   17 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 202
            +  DVYI  ELM+TDLY++IRS Q LS++HCQYF YQ+LR LK +HSA V+HRDLKPSNL L
Sbjct:  111 ELEDVYIVQELMETDLYRVIRS-QPLSDDHCQYFTYQILRALKAMHSAGVVHRDLKPSNLLL 171          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK20_ARATH (Mitogen-activated protein kinase 20 OS=Arabidopsis thaliana GN=MPK20 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.072e-17
Identity = 37/60 (61.67%), Postives = 50/60 (83.33%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQLLR LKYIH+ANV HRDLKP N+
Sbjct:   98 EFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI 157          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK10_ORYSJ (Mitogen-activated protein kinase 10 OS=Oryza sativa subsp. japonica GN=MPK10 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.400e-17
Identity = 37/59 (62.71%), Postives = 50/59 (84.75%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F D+Y+  ELM++DL+Q+I++N  L++EH Q+FLYQLLR LKYIH+ANV HRDLKP N+
Sbjct:   99 FKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNI 157          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK03_RAT (Mitogen-activated protein kinase 3 OS=Rattus norvegicus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 88.1965 bits (217), Expect = 1.400e-17
Identity = 42/62 (67.74%), Postives = 52/62 (83.87%), Query Frame = -1
Query:    8 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSLLRT 193
            DVYI  +LM+TDLY++++S Q LS +H  YFLYQ+LRGLKYIHSANV+HRDLKPSNL +  T
Sbjct:  118 DVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTT 178          
The following BLAST results are available for this feature:
BLAST of EH117788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
MK01_RAT4.810e-1864.71Mitogen-activated protein kinase 1 OS=Rattus norve... [more]
MK01_MOUSE4.810e-1864.71Mitogen-activated protein kinase 1 OS=Mus musculus... [more]
MK01_HUMAN4.810e-1864.71Mitogen-activated protein kinase 1 OS=Homo sapiens... [more]
MK01_BOVIN4.810e-1864.71Mitogen-activated protein kinase 1 OS=Bos taurus G... [more]
MPK9_ARATH6.282e-1861.67Mitogen-activated protein kinase 9 OS=Arabidopsis ... [more]
CPK1_CRYNE6.282e-1867.21Mitogen-activated protein kinase CPK1 OS=Cryptococ... [more]
SPK1_SCHPO8.205e-1867.74Mitogen-activated protein kinase spk1 OS=Schizosac... [more]
MPK20_ARATH1.072e-1761.67Mitogen-activated protein kinase 20 OS=Arabidopsis... [more]
MPK10_ORYSJ1.400e-1762.71Mitogen-activated protein kinase 10 OS=Oryza sativ... [more]
MK03_RAT1.400e-1767.74Mitogen-activated protein kinase 3 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionfjfw17 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117788 ID=EH117788; Name=EH117788; organism=Citrus sinensis; type=EST; length=211bp
GACGATGAGTCCTGAGTAACGAGAGATTGCTGGGCTTCAAATCCCGATGA
ATAACATTTGCTGAATGGATATACTTGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCCTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCATGAGTTCCGCAGCAATATAGACATCAGTGAAT
TGGTACGCAGT
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