EH117788

Overview
NameEH117788
Unique NameEH117788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length211
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2178 contig Csv1_Contig2178:412..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK03_MOUSE (Mitogen-activated protein kinase 3 OS=Mus musculus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 88.1965 bits (217), Expect = 1.400e-17
Identity = 42/62 (67.74%), Postives = 52/62 (83.87%), Query Frame = -1
Query:    8 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSLLRT 193
            DVYI  +LM+TDLY++++S Q LS +H  YFLYQ+LRGLKYIHSANV+HRDLKPSNL +  T
Sbjct:  118 DVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTT 178          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK03_HUMAN (Mitogen-activated protein kinase 3 OS=Homo sapiens GN=MAPK3 PE=1 SV=4)

HSP 1 Score: 88.1965 bits (217), Expect = 1.400e-17
Identity = 42/62 (67.74%), Postives = 52/62 (83.87%), Query Frame = -1
Query:    8 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSLLRT 193
            DVYI  +LM+TDLY++++S Q LS +H  YFLYQ+LRGLKYIHSANV+HRDLKPSNL +  T
Sbjct:  117 DVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTT 177          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK16_ORYSJ (Mitogen-activated protein kinase 16 OS=Oryza sativa subsp. japonica GN=MPK16 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.828e-17
Identity = 37/60 (61.67%), Postives = 51/60 (85.00%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F D+YI  ELM++DL+Q+I++N  L+ EH Q+FLYQLLRG+KYIH+A+V HRDLKP N+
Sbjct:   95 EFRDIYIIFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGMKYIHAASVFHRDLKPKNI 154          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: ERKA_DROME (Mitogen-activated protein kinase ERK-A OS=Drosophila melanogaster GN=rl PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.828e-17
Identity = 43/65 (66.15%), Postives = 53/65 (81.54%), Query Frame = -1
Query:    8 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSLLRT 202
            Q  DVYI   LM+TDLY+++++ Q LS +H  YFLYQ+LRGLKYIHSANV+HRDLKPSNL L +T
Sbjct:  160 QMRDVYIVQCLMETDLYKLLKT-QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKT 223          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK17_ORYSJ (Mitogen-activated protein kinase 17 OS=Oryza sativa subsp. japonica GN=MPK17 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 2.387e-17
Identity = 36/60 (60.00%), Postives = 51/60 (85.00%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQLLRG+KYIH+A+V HRDLKP N+
Sbjct:  178 EFRDIYVIFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGMKYIHAASVFHRDLKPKNI 237          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK11_ORYSJ (Mitogen-activated protein kinase 11 OS=Oryza sativa subsp. japonica GN=MPK11 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.118e-17
Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQ+LR LKYIH+ANV HRDLKP N+
Sbjct:  100 FRDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQMLRALKYIHTANVYHRDLKPKNI 158          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK9_ORYSJ (Mitogen-activated protein kinase 9 OS=Oryza sativa subsp. japonica GN=MPK9 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.318e-17
Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F D+Y+  ELM++DL+Q+I++N  L++EH Q+FLYQLLR LKYIH+A+V HRDLKP N+
Sbjct:  181 FKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTASVYHRDLKPKNI 239          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK19_ARATH (Mitogen-activated protein kinase 19 OS=Arabidopsis thaliana GN=MPK19 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.318e-17
Identity = 35/60 (58.33%), Postives = 50/60 (83.33%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQ+LR LKY+H+ANV HRDLKP N+
Sbjct:   98 EFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNI 157          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK13_ORYSJ (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. japonica GN=MPK13 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.946e-17
Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = -1
Query:   23 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 211
            T  +F D+Y+  ELM++DL+Q+I +N  LS EH ++FLYQLL  LKYIHSANV HRDLKP N+
Sbjct:   83 TRREFRDIYVVFELMESDLHQVIEANHDLSPEHHRFFLYQLLCALKYIHSANVFHRDLKPKNI 145          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK13_ORYSI (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. indica GN=MPK13 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 6.946e-17
Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = -1
Query:   23 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 211
            T  +F D+Y+  ELM++DL+Q+I +N  LS EH ++FLYQLL  LKYIHSANV HRDLKP N+
Sbjct:   83 TRREFRDIYVVFELMESDLHQVIEANHDLSPEHHRFFLYQLLCALKYIHSANVFHRDLKPKNI 145          
The following BLAST results are available for this feature:
BLAST of EH117788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
MK03_MOUSE1.400e-1767.74Mitogen-activated protein kinase 3 OS=Mus musculus... [more]
MK03_HUMAN1.400e-1767.74Mitogen-activated protein kinase 3 OS=Homo sapiens... [more]
MPK16_ORYSJ1.828e-1761.67Mitogen-activated protein kinase 16 OS=Oryza sativ... [more]
ERKA_DROME1.828e-1766.15Mitogen-activated protein kinase ERK-A OS=Drosophi... [more]
MPK17_ORYSJ2.387e-1760.00Mitogen-activated protein kinase 17 OS=Oryza sativ... [more]
MPK11_ORYSJ3.118e-1761.02Mitogen-activated protein kinase 11 OS=Oryza sativ... [more]
MPK9_ORYSJ5.318e-1761.02Mitogen-activated protein kinase 9 OS=Oryza sativa... [more]
MPK19_ARATH5.318e-1758.33Mitogen-activated protein kinase 19 OS=Arabidopsis... [more]
MPK13_ORYSJ6.946e-1760.32Mitogen-activated protein kinase 13 OS=Oryza sativ... [more]
MPK13_ORYSI6.946e-1760.32Mitogen-activated protein kinase 13 OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionfjfw17 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117788 ID=EH117788; Name=EH117788; organism=Citrus sinensis; type=EST; length=211bp
GACGATGAGTCCTGAGTAACGAGAGATTGCTGGGCTTCAAATCCCGATGA
ATAACATTTGCTGAATGGATATACTTGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCCTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCATGAGTTCCGCAGCAATATAGACATCAGTGAAT
TGGTACGCAGT
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