EH117788

Overview
NameEH117788
Unique NameEH117788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length211
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2178 contig Csv1_Contig2178:412..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MAPK2_PNECA (Mitogen-activated protein kinase 2 OS=Pneumocystis carinii GN=MKP2 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.946e-17
Identity = 37/61 (60.66%), Postives = 54/61 (88.52%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F++VY+  ELM+TD++++IR+ Q LS++HCQYF+YQ+LR LK +HSA+++HRDLKPSNL L
Sbjct:   89 FSEVYLIQELMETDMHRVIRT-QDLSDDHCQYFIYQILRALKAMHSADILHRDLKPSNLLL 148          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: SUR1_CAEEL (Mitogen-activated protein kinase mpk-1 OS=Caenorhabditis elegans GN=mpk-1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 9.072e-17
Identity = 42/68 (61.76%), Postives = 52/68 (76.47%), Query Frame = -1
Query:    8 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSLLRT 211
            T     D+YI   LM+TDLY+++++ Q LS +H  YFLYQ+LRGLKYIHSANV+HRDLKPSNL L  T
Sbjct:  165 TVDSLKDIYIVQCLMETDLYKLLKT-QKLSNDHVCYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 231          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MAPK_FUSSO (Mitogen-activated protein kinase OS=Fusarium solani subsp. pisi GN=MAPK PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.185e-16
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F +VY+  ELM+TD+++ IR+ Q LS++HCQYF+YQ LR LK +HSANV+HRDLKPSNL L
Sbjct:   96 FNEVYLIQELMETDMHRAIRT-QDLSDDHCQYFIYQTLRALKAMHSANVLHRDLKPSNLLL 155          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK18_ARATH (Mitogen-activated protein kinase 18 OS=Arabidopsis thaliana GN=MPK18 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 1.547e-16
Identity = 34/60 (56.67%), Postives = 50/60 (83.33%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F D+Y+  ELM++DL+Q+I++N  L+ EH Q+FLYQ+LR LK++H+ANV HRDLKP N+
Sbjct:   86 EFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHTANVYHRDLKPKNI 145          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: SPM1_SCHPO (Mitogen-activated protein kinase spm1 OS=Schizosaccharomyces pombe GN=spm1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16
Identity = 40/61 (65.57%), Postives = 47/61 (77.05%), Query Frame = -1
Query:   23 YQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 205
            Y F +VYI  ELM+ DL  II+S Q L++ H Q F+YQ+L GLKYIHSANVIHRDLKP NL
Sbjct:   95 YNFNEVYIYEELMEADLNAIIKSGQPLTDAHFQSFIYQILCGLKYIHSANVIHRDLKPGNL 155          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: ERK1_CANAL (Extracellular signal-regulated kinase 1 OS=Candida albicans GN=ERK1 PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.447e-16
Identity = 38/61 (62.30%), Postives = 52/61 (85.25%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F ++Y+  ELM+TDL+++IR+ Q+LS++H QYF+YQ LR LK +HSANV+HRDLKPSNL L
Sbjct:  141 FNEIYLIQELMETDLHRVIRT-QNLSDDHIQYFIYQTLRALKAMHSANVLHRDLKPSNLLL 200          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14B_DROME (Mitogen-activated protein kinase 14B OS=Drosophila melanogaster GN=p38b PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.680e-16
Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = -1
Query:   17 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 202
            QF  VY+   LMD DL  IIR+ Q LS++H Q+ +YQ+LRGLKYIHSA VIHRDLKPSN+++
Sbjct:  101 QFQQVYMVTHLMDADLNNIIRT-QKLSDDHVQFLVYQILRGLKYIHSAGVIHRDLKPSNIAV 161          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPK17_ARATH (Mitogen-activated protein kinase 17 OS=Arabidopsis thaliana GN=MPK17 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 33/60 (55.00%), Postives = 49/60 (81.67%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F D+Y+  ELM++DL+ +++ N  L+ +H Q+FLYQLLRGLK++HSA+V HRDLKP N+
Sbjct:   89 EFKDIYVVFELMESDLHHVLKVNDDLTPQHHQFFLYQLLRGLKFMHSAHVFHRDLKPKNI 148          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: NLK2_XENTR (Serine/threonine protein kinase NLK2 OS=Xenopus tropicalis GN=nlk.2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15
Identity = 34/59 (57.63%), Postives = 47/59 (79.66%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F ++Y+  ELM TDL+++I S Q LS +H + FLYQ+LRGLKY+HSA ++HRD+KP NL
Sbjct:  141 FEEIYVITELMQTDLHKVIVSPQPLSSDHIKVFLYQILRGLKYLHSAGILHRDIKPGNL 199          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: NLK2_XENLA (Serine/threonine protein kinase NLK2 OS=Xenopus laevis GN=nlk.2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15
Identity = 34/59 (57.63%), Postives = 47/59 (79.66%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F ++Y+  ELM TDL+++I S Q LS +H + FLYQ+LRGLKY+HSA ++HRD+KP NL
Sbjct:  134 FEEIYVITELMQTDLHKVIVSPQPLSSDHIKVFLYQILRGLKYLHSAGILHRDIKPGNL 192          
The following BLAST results are available for this feature:
BLAST of EH117788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
MAPK2_PNECA6.946e-1760.66Mitogen-activated protein kinase 2 OS=Pneumocystis... [more]
SUR1_CAEEL9.072e-1761.76Mitogen-activated protein kinase mpk-1 OS=Caenorha... [more]
MAPK_FUSSO1.185e-1663.93Mitogen-activated protein kinase OS=Fusarium solan... [more]
MPK18_ARATH1.547e-1656.67Mitogen-activated protein kinase 18 OS=Arabidopsis... [more]
SPM1_SCHPO2.021e-1665.57Mitogen-activated protein kinase spm1 OS=Schizosac... [more]
ERK1_CANAL3.447e-1662.30Extracellular signal-regulated kinase 1 OS=Candida... [more]
MK14B_DROME7.680e-1662.90Mitogen-activated protein kinase 14B OS=Drosophila... [more]
MPK17_ARATH1.003e-1555.00Mitogen-activated protein kinase 17 OS=Arabidopsis... [more]
NLK2_XENTR1.711e-1557.63Serine/threonine protein kinase NLK2 OS=Xenopus tr... [more]
NLK2_XENLA1.711e-1557.63Serine/threonine protein kinase NLK2 OS=Xenopus la... [more]

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Properties
Property NameValue
Genbank descriptionfjfw17 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117788 ID=EH117788; Name=EH117788; organism=Citrus sinensis; type=EST; length=211bp
GACGATGAGTCCTGAGTAACGAGAGATTGCTGGGCTTCAAATCCCGATGA
ATAACATTTGCTGAATGGATATACTTGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCCTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCATGAGTTCCGCAGCAATATAGACATCAGTGAAT
TGGTACGCAGT
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