EH117788

Overview
NameEH117788
Unique NameEH117788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length211
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2178 contig Csv1_Contig2178:412..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14A_DANRE (Mitogen-activated protein kinase 14A OS=Danio rerio GN=mapk14a PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = -1
Query:   17 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 202
            +F DVY+   LM  DL  I++  Q L+++H Q+ +YQ+LRGLKYIHSA++IHRDLKPSNL++
Sbjct:   99 EFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 159          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14A_CYPCA (Mitogen-activated protein kinase 14A OS=Cyprinus carpio GN=mapk14a PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = -1
Query:   17 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 202
            +F DVY+   LM  DL  I++  Q L+++H Q+ +YQ+LRGLKYIHSA++IHRDLKPSNL++
Sbjct:   99 EFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 159          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: FUS3_YEAST (Mitogen-activated protein kinase FUS3 OS=Saccharomyces cerevisiae GN=FUS3 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F +VYI  ELM TDL+++I S Q LS++H QYF+YQ LR +K +H +NVIHRDLKPSNL
Sbjct:   86 FNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNL 143          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14_XENLA (Mitogen-activated protein kinase 14 OS=Xenopus laevis GN=mapk14 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.491e-15
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = -1
Query:   17 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 202
            +F DVY+   LM  DL  I++  Q L+++H Q+ +YQ+LRGLKYIHSA +IHRDLKPSNL++
Sbjct:   99 EFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAGIIHRDLKPSNLAV 159          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: NLK_CAEEL (Serine/threonine kinase NLK OS=Caenorhabditis elegans GN=lit-1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.109e-14
Identity = 32/59 (54.24%), Postives = 49/59 (83.05%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F ++Y+  ELM +DL++II S Q+L+ +H + F+YQ+LRGLKY+H+AN++HRD+KP NL
Sbjct:  314 FQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNL 372          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14B_CYPCA (Mitogen-activated protein kinase 14B OS=Cyprinus carpio GN=mapk14b PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.109e-14
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F DVY+   LM  DL  I++  Q L+++H Q+ +YQ+LRGLKYIHSA++IHRDLKPSNL++
Sbjct:  100 FNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 159          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK11_MOUSE (Mitogen-activated protein kinase 11 OS=Mus musculus GN=Mapk11 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.109e-14
Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F++VY+   LM  DL  I++  Q+LS+EH Q+ +YQLLRGLKYIHSA +IHRDLKPSN+++
Sbjct:   99 FSEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 158          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK11_HUMAN (Mitogen-activated protein kinase 11 OS=Homo sapiens GN=MAPK11 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.109e-14
Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F++VY+   LM  DL  I++  Q+LS+EH Q+ +YQLLRGLKYIHSA +IHRDLKPSN+++
Sbjct:   99 FSEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 158          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK04_HUMAN (Mitogen-activated protein kinase 4 OS=Homo sapiens GN=MAPK4 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.892e-14
Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = -1
Query:   23 YQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 205
            ++F+  YI  E M+TDL +++    +L+EEH + F+YQLLRGLKYIHSANV+HRDLKP+N+
Sbjct:   96 FKFSVAYIVQEYMETDLARLLEQG-TLAEEHAKLFMYQLLRGLKYIHSANVLHRDLKPANI 155          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPKC_ASPCL (Mitogen-activated protein kinase mpkC OS=Aspergillus clavatus GN=mpkC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+YIA EL+ TDL +++ S + L  +  QYF+YQ+LRGLKYIHSANVIHRDLKP+N+
Sbjct:   92 DIYIATELLGTDLSRLL-SVKPLDSQFAQYFIYQILRGLKYIHSANVIHRDLKPTNI 147          
The following BLAST results are available for this feature:
BLAST of EH117788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
MK14A_DANRE6.501e-1556.45Mitogen-activated protein kinase 14A OS=Danio reri... [more]
MK14A_CYPCA6.501e-1556.45Mitogen-activated protein kinase 14A OS=Cyprinus c... [more]
FUS3_YEAST6.501e-1562.71Mitogen-activated protein kinase FUS3 OS=Saccharom... [more]
MK14_XENLA8.491e-1556.45Mitogen-activated protein kinase 14 OS=Xenopus lae... [more]
NLK_CAEEL1.109e-1454.24Serine/threonine kinase NLK OS=Caenorhabditis eleg... [more]
MK14B_CYPCA1.109e-1457.38Mitogen-activated protein kinase 14B OS=Cyprinus c... [more]
MK11_MOUSE1.109e-1459.02Mitogen-activated protein kinase 11 OS=Mus musculu... [more]
MK11_HUMAN1.109e-1459.02Mitogen-activated protein kinase 11 OS=Homo sapien... [more]
MK04_HUMAN1.892e-1457.38Mitogen-activated protein kinase 4 OS=Homo sapiens... [more]
MPKC_ASPCL2.470e-1463.16Mitogen-activated protein kinase mpkC OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionfjfw17 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117788 ID=EH117788; Name=EH117788; organism=Citrus sinensis; type=EST; length=211bp
GACGATGAGTCCTGAGTAACGAGAGATTGCTGGGCTTCAAATCCCGATGA
ATAACATTTGCTGAATGGATATACTTGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCCTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCATGAGTTCCGCAGCAATATAGACATCAGTGAAT
TGGTACGCAGT
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