EH117786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_BRAFL (40S ribosomal protein S6 OS=Branchiostoma floridae GN=RPS6 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.495e-27 Identity = 55/71 (77.46%), Postives = 65/71 (91.55%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 ++KGY+ R+SGGNDKQGFPMKQGVL RVRLL+ KGHSCYRPRRTGERKRKSVRGCIV S+L+VL+LV++ Sbjct: 44 EWKGYLVRISGGNDKQGFPMKQGVLTNGRVRLLLGKGHSCYRPRRTGERKRKSVRGCIVDSNLSVLNLVIL 114
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_AEDAL (40S ribosomal protein S6 OS=Aedes albopictus GN=RpS6 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.789e-27 Identity = 54/71 (76.06%), Postives = 64/71 (90.14%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 ++KGYVF+++GGNDKQGFPMKQGVL RVRLL+ KGHSCYRPRRTGERKRKSVRGCIV +L+ L+L+VV Sbjct: 44 EWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVV 114
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_AEDAE (40S ribosomal protein S6 OS=Aedes aegypti GN=RpS6 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 9.789e-27 Identity = 54/71 (76.06%), Postives = 64/71 (90.14%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 ++KGYVF+++GGNDKQGFPMKQGVL RVRLL+ KGHSCYRPRRTGERKRKSVRGCIV +L+ L+L+VV Sbjct: 44 EWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVV 114
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_YARLI (40S ribosomal protein S6 OS=Yarrowia lipolytica GN=RPS6 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.181e-26 Identity = 55/73 (75.34%), Postives = 64/73 (87.67%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRRTGERKRKSVRGCIVGSDLAVLSLVVVTQ 229 +FKGYV +++GGNDKQGFPMKQGV+ P RVRLL+SK SCYR RR GERKRKSVRGCIV SDL+VLS+V+V Q Sbjct: 44 EFKGYVLKITGGNDKQGFPMKQGVMHPTRVRLLLSKDSSCYRSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQ 116
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_ONCMY (40S ribosomal protein S6 OS=Oncorhynchus mykiss GN=rps6 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.858e-26 Identity = 53/71 (74.65%), Postives = 65/71 (91.55%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 ++KGY+ R+SGGNDKQGFPMKQGVL RVRLL++KGHSCYRPRRTGERKRKSVRGCI ++L+VL+LV++ Sbjct: 44 EWKGYMVRISGGNDKQGFPMKQGVLTHGRVRLLLAKGHSCYRPRRTGERKRKSVRGCIGDANLSVLNLVII 114
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_DROME (40S ribosomal protein S6 OS=Drosophila melanogaster GN=RpS6 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.287e-26 Identity = 53/71 (74.65%), Postives = 64/71 (90.14%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 ++KGY R++GGNDKQGFPMKQGVL RVRLL+ KGHSCYRPRRTGERKRKSVRGCIV ++++VL+LVV+ Sbjct: 44 EWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVL 114
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_CAEEL (40S ribosomal protein S6 OS=Caenorhabditis elegans GN=rps-6 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.728e-23 Identity = 49/71 (69.01%), Postives = 60/71 (84.51%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 ++KGYV R+ GGNDKQGFPMKQG+L RVRLL+ KG SCYR R+ GERKRKSVRGCIV ++++ LSLV+V Sbjct: 44 EWKGYVVRIGGGNDKQGFPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIV 114
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.120e-22 Identity = 51/73 (69.86%), Postives = 61/73 (83.56%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYR--PRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 +FKGYVF++ GG DKQGFPMKQGVL P RVRLL+ +G C+R RRTGER+RKSVRGCIV DL+VL+LV+V Sbjct: 44 EFKGYVFKIKGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIV 116
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 1.463e-22 Identity = 51/73 (69.86%), Postives = 61/73 (83.56%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYR--PRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 +FKGYVF++ GG DKQGFPMKQGVL P RVRLL+ +G C+R RRTGER+RKSVRGCIV DL+VL+LV+V Sbjct: 44 EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIV 116
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.558e-22 Identity = 50/73 (68.49%), Postives = 60/73 (82.19%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYR--PRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 +FKGYVF++ GG DKQGFPMKQGVL P RVRLL+ +G C+R RR GER+RKSVRGCIV DL+VL+LV+V Sbjct: 44 EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIV 116 The following BLAST results are available for this feature:
BLAST of EH117786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >EH117786 ID=EH117786; Name=EH117786; organism=Citrus sinensis; type=EST; length=236bpback to top |