EH117786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.146e-21 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 2 Query: 17 KGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYR--PRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 KGYVF++ GG DKQGFPMKQGVL P RVRLL+ +G C+R RR GER+RKSVRGCIV DL+VL+LV+V Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIV 71
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_DICDI (40S ribosomal protein S6 OS=Dictyostelium discoideum GN=rps6 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.369e-20 Identity = 44/71 (61.97%), Postives = 55/71 (77.46%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 +FKGYVF+++GGND +GFPM QGV P RVRLL+ C++P R GERKRKSVRGCIV D+A L L++V Sbjct: 44 EFKGYVFKITGGNDTEGFPMMQGVGAPTRVRLLLDGRSGCFKPSRDGERKRKSVRGCIVAEDIASLQLIIV 114
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_ENCCU (40S ribosomal protein S6 OS=Encephalitozoon cuniculi GN=RPS6 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.571e-14 Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 +F+G + ++GG+D QGFPM G L RVR L+SKG + YR RR G R+RKSVRG IV ++ VL+L+++ Sbjct: 29 EFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIIL 99
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_LEIMA (40S ribosomal protein S6 OS=Leishmania major GN=RPS6 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.503e-14 Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRR--TGERKRKSVRGCIVGSDLAVLSLVV 220 +FKGY+FR+ GG+DK GFPM GVL RV LL+ +G + R GER+RK+VRGC++ SD+A++++ + Sbjct: 45 EFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTI 116
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6_LEIIN (40S ribosomal protein S6 OS=Leishmania infantum GN=RPS6 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.503e-14 Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 2 Query: 11 QFKGYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRR--TGERKRKSVRGCIVGSDLAVLSLVV 220 +FKGY+FR+ GG+DK GFPM GVL RV LL+ +G + R GER+RK+VRGC++ SD+A++++ + Sbjct: 45 EFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTI 116
BLAST of EH117786 vs. ExPASy Swiss-Prot
Match: RS6E_METKA (30S ribosomal protein S6e OS=Methanopyrus kandleri GN=rps6e PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.765e-11 Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 2 Query: 20 GYVFRVSGGNDKQGFPMKQGVLLPHRVRLLMSKGHSCYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 223 GY +++GG DK GFPM+ + P RVRLL+S G +RP R GER+RK+VRG + D+ ++ V+V Sbjct: 47 GYKLKITGGTDKDGFPMRPDIHGPVRVRLLLS-GPPGFRPERKGERRRKTVRGNTISEDIVQVNTVIV 113 The following BLAST results are available for this feature:
BLAST of EH117786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EH117786 ID=EH117786; Name=EH117786; organism=Citrus sinensis; type=EST; length=236bpback to top |