EH117779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_HUMAN (60S ribosomal protein L13 OS=Homo sapiens GN=RPL13 PE=1 SV=4) HSP 1 Score: 90.5077 bits (223), Expect = 2.836e-18 Identity = 43/72 (59.72%), Postives = 56/72 (77.78%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 228 IHKK+A TIG+SVD RR+N+S E LQ+NVQR K Y++KL++FPR+ K GDS+ EEL ATQ+ GP MP+ Sbjct: 86 IHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPV 157
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_CHICK (60S ribosomal protein L13 OS=Gallus gallus GN=RPL13 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.704e-18 Identity = 43/72 (59.72%), Postives = 56/72 (77.78%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 228 I+K+ A TIG+SVD RR+N+S E LQ+NVQR K Y++KL++FPR+ K GDS+PEEL ATQ+ GP MPI Sbjct: 86 INKRFARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSPEELKMATQLSGPVMPI 157
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_BOVIN (60S ribosomal protein L13 OS=Bos taurus GN=RPL13 PE=2 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 8.252e-18 Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 228 IHKK+A TIG+SVD RR+N+ E LQ+NVQR K Y++KL++FPR+ K GDS+ EEL ATQ+ GP MPI Sbjct: 86 IHKKVARTIGISVDPRRRNKCTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPI 157
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_CRIGR (60S ribosomal protein L13 OS=Cricetulus griseus GN=RPL13 PE=2 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.401e-17 Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 228 IHKK+A TIG+SVD RR+N+S E LQ+NVQR K Y++KL++FPR+ K GDS+ EEL ATQ+ GP M I Sbjct: 86 IHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMRI 157
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_DROME (60S ribosomal protein L13 OS=Drosophila melanogaster GN=RpL13 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.556e-16 Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTV 249 I A TIG++VD RRKN+SLE Q N+QR K Y++KL++FP +K +AG+S+ EE ATQ++GP +PI E+P V Sbjct: 85 IGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAV 163
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_ICTPU (60S ribosomal protein L13 OS=Ictalurus punctatus GN=rpl13 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.467e-16 Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMP--IAPEKPTVELVTQ 264 I+K++A TIG++VD RR+NRS E L NVQR K Y++KL++FPR+ K GDS EE+ ATQ+ GP MP I +K ++T+ Sbjct: 86 INKRVARTIGIAVDPRRRNRSTESLHVNVQRLKVYRSKLILFPRKVSAPKKGDSTEEEVKMATQLTGPVMPIKIVHKKEKARMITE 171
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_LUMRU (60S ribosomal protein L13 OS=Lumbricus rubellus GN=RPL13 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.902e-14 Identity = 40/80 (50.00%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMP----IAPEK 240 I+KK A IG+SVD RR+N+S+E LQ NVQR K Y++KL++FP++ K GD+ EE+ ATQ++G +P I PEK Sbjct: 62 INKKEARAIGISVDVRRRNKSVESLQLNVQRLKEYRSKLILFPKKLSKPNKGDATEEEMKLATQLKGKLLPRTAWIKPEK 141
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_SCHMA (60S ribosomal protein L13 OS=Schistosoma mansoni GN=RPL13 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.535e-14 Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 228 ++ K A TIG++VDHRR+N S+EGLQ NV R K YKAKL++FP K +A D+ +E+ ATQ++ P +PI Sbjct: 85 LNPKFARTIGIAVDHRRRNVSVEGLQRNVARLKAYKAKLILFPLNPAKPQAMDAKADEVKKATQLRRPVLPI 156
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_CAEEL (60S ribosomal protein L13 OS=Caenorhabditis elegans GN=rpl-13 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.588e-13 Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIA 231 I + A TIG++VD RR N++ EGL++N R K YKAKL++FP++A K GDS+ EEL A Q++G +P++ Sbjct: 86 ISQAQARTIGIAVDVRRTNKTAEGLKANADRLKEYKAKLILFPKKASAPKKGDSSAEELKVAAQLRGDVLPLS 158
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_SPOFR (60S ribosomal protein L13 OS=Spodoptera frugiperda GN=RpL13 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.044e-12 Identity = 35/77 (45.45%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKP 243 ++ A TIG++VD RR+N+S+E LQ NVQR K Y+A+L++FP + +K G++ EE ATQ++GP MP+ P Sbjct: 85 LNPAFARTIGIAVDPRRRNKSVESLQVNVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 160 The following BLAST results are available for this feature:
BLAST of EH117779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EH117779 ID=EH117779; Name=EH117779; organism=Citrus sinensis; type=EST; length=275bpback to top |